RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 HSP90AB3PQ58FF7 597 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 GOLGA1Q92805 767 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 SMARCE1Q969G3 411 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 STRBPQ96SI9 672 aaKnown RBP17.41■□□□□ 0.38
C9orf3-204ENST00000424143 ZBTB3Q9H5J0 574 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 ARFGAP3Q9NP61 516 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 COL22A1Q8NFW1 1626 aaPredicted RBP17.41■□□□□ 0.38
C9orf3-204ENST00000424143 CHD4Q14839 1912 aa17.4■□□□□ 0.38
C9orf3-204ENST00000424143 DOCK2Q92608 1830 aa17.4■□□□□ 0.38
C9orf3-204ENST00000424143 RANBP6O60518 1105 aaKnown RBP17.4■□□□□ 0.38
C9orf3-204ENST00000424143 BMP15O95972 392 aa17.4■□□□□ 0.38
C9orf3-204ENST00000424143 GNG11P61952 73 aa17.4■□□□□ 0.38
C9orf3-204ENST00000424143 TAF7LQ5H9L4 462 aa17.4■□□□□ 0.38
C9orf3-204ENST00000424143 TMEM67Q5HYA8 995 aa17.4■□□□□ 0.38
C9orf3-204ENST00000424143 SLC9C2Q5TAH2 1124 aa17.4■□□□□ 0.38
C9orf3-204ENST00000424143 RAI14Q9P0K7 980 aa17.4■□□□□ 0.38
C9orf3-204ENST00000424143 LRP5O75197 1615 aa17.4■□□□□ 0.38
C9orf3-204ENST00000424143 SPATA31A3Q5VYP0 1347 aa17.4■□□□□ 0.38
C9orf3-204ENST00000424143 PDE6AP16499 860 aa17.39■□□□□ 0.38
C9orf3-204ENST00000424143 TXLNAP40222 546 aa17.39■□□□□ 0.38
C9orf3-204ENST00000424143 TOB1P50616 345 aaPredicted RBP17.39■□□□□ 0.38
C9orf3-204ENST00000424143 TRIM22Q8IYM9 498 aa17.39■□□□□ 0.38
C9orf3-204ENST00000424143 AIFM3Q96NN9 605 aa17.39■□□□□ 0.38
C9orf3-204ENST00000424143 CLIC6Q96NY7 704 aa17.39■□□□□ 0.38
C9orf3-204ENST00000424143 CTAGE1Q96RT6 745 aa17.39■□□□□ 0.38
C9orf3-204ENST00000424143 NFE2L3Q9Y4A8 694 aa17.39■□□□□ 0.38
C9orf3-204ENST00000424143 SLC12A7Q9Y666 1083 aa17.39■□□□□ 0.38
C9orf3-204ENST00000424143 MYH3P11055 1940 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 ITIH6Q6UXX5 1313 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 AKR1B15C9JRZ8 316 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-204ENST00000424143 NPHP1O15259 732 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 ACTN4O43707 911 aaKnown RBP17.39■□□□□ 0.37
C9orf3-204ENST00000424143 DEXIO95424 95 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 CCDC175P0C221 793 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 GNAT2P19087 354 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 PBX1P40424 430 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 USP5P45974 858 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 METTL24Q5JXM2 366 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 KIF6Q6ZMV9 814 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 CEP112Q8N8E3 955 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 AK7Q96M32 723 aa17.39■□□□□ 0.37
C9orf3-204ENST00000424143 AATFQ9NY61 560 aaKnown RBP eCLIP17.39■□□□□ 0.37
C9orf3-204ENST00000424143 MAP2K7O14733 419 aa17.38■□□□□ 0.37
C9orf3-204ENST00000424143 CDK11BP21127 795 aaKnown RBP17.38■□□□□ 0.37
C9orf3-204ENST00000424143 SPATA1Q5VX52 437 aa17.38■□□□□ 0.37
C9orf3-204ENST00000424143 ISM2Q6H9L7 571 aa17.38■□□□□ 0.37
C9orf3-204ENST00000424143 SH3RF1Q7Z6J0 888 aa17.38■□□□□ 0.37
C9orf3-204ENST00000424143 EXOC4Q96A65 974 aa17.38■□□□□ 0.37
C9orf3-204ENST00000424143 WDR24Q96S15 920 aa17.38■□□□□ 0.37
C9orf3-204ENST00000424143 RAB21Q9UL25 225 aa17.38■□□□□ 0.37
C9orf3-204ENST00000424143 ANKRD36CQ5JPF3 1778 aa17.38■□□□□ 0.37
C9orf3-204ENST00000424143 ZNF532Q9HCE3 1301 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 ANKRD18BA2A2Z9 1011 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 B4E1Z4 1266 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 ATF3P18847 181 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 TMED8Q6PL24 325 aaPredicted RBP17.37■□□□□ 0.37
C9orf3-204ENST00000424143 GIGYF2Q6Y7W6 1299 aaKnown RBP17.37■□□□□ 0.37
C9orf3-204ENST00000424143 NFXL1Q6ZNB6 911 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 APTXQ7Z2E3 356 aaKnown RBP17.37■□□□□ 0.37
C9orf3-204ENST00000424143 SRGAP1Q7Z6B7 1085 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 MSANTD4Q8NCY6 345 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 TTLL11Q8NHH1 800 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 STAG1Q8WVM7 1258 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 PHKBQ93100 1093 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 FUT8Q9BYC5 575 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 PIH1D3Q9NQM4 214 aaKnown RBP17.37■□□□□ 0.37
C9orf3-204ENST00000424143 MYO1AQ9UBC5 1043 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 SHANK3Q9BYB0 1731 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 PNPLA7Q6ZV29 1317 aa17.37■□□□□ 0.37
C9orf3-204ENST00000424143 PDE8BO95263 885 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 FMR1Q06787 632 aaKnown RBP eCLIP17.36■□□□□ 0.37
C9orf3-204ENST00000424143 SMC1AQ14683 1233 aaKnown RBP17.36■□□□□ 0.37
C9orf3-204ENST00000424143 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
C9orf3-204ENST00000424143 AKNAD1Q5T1N1 836 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 RASGRP2Q7LDG7 609 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 MICU3Q86XE3 530 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 DIS3L2Q8IYB7 885 aaKnown RBP17.36■□□□□ 0.37
C9orf3-204ENST00000424143 ST7Q9NRC1 585 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 CDC23Q9UJX2 597 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 BCL9LQ86UU0 1499 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 IFIT3O14879 490 aaKnown RBP17.36■□□□□ 0.37
C9orf3-204ENST00000424143 FGFR2P21802 821 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 CDKAL1Q5VV42 579 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 LDHAL6AQ6ZMR3 332 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 IFNL3Q8IZI9 196 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 CRACR2BQ8N4Y2 399 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-204ENST00000424143 IQUBQ8NA54 791 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 LPIN2Q92539 896 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 PYM1Q9BRP8 204 aaKnown RBP17.36■□□□□ 0.37
C9orf3-204ENST00000424143 SLC26A6Q9BXS9 759 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 PARD6BQ9BYG5 372 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 ZSWIM5Q9P217 1185 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 SERTAD1Q9UHV2 236 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 ADGRG1Q9Y653 693 aa17.36■□□□□ 0.37
C9orf3-204ENST00000424143 MROH5Q6ZUA9 1318 aa17.35■□□□□ 0.37
C9orf3-204ENST00000424143 POLR2DO15514 142 aaKnown RBP17.35■□□□□ 0.37
C9orf3-204ENST00000424143 CTSWP56202 376 aa17.35■□□□□ 0.37
C9orf3-204ENST00000424143 RTN1Q16799 776 aa17.35■□□□□ 0.37
C9orf3-204ENST00000424143 TOGARAM2Q6ZUX3 1019 aa17.35■□□□□ 0.37
C9orf3-204ENST00000424143 RAB11FIP4Q86YS3 637 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms