RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 DHX36Q9H2U1 1008 aaKnown RBP11.66□□□□□ -0.54
HERC3-204ENST00000422770 RNF186Q9NXI6 227 aa11.66□□□□□ -0.54
HERC3-204ENST00000422770 SNCAIPQ9Y6H5 919 aa11.66□□□□□ -0.54
HERC3-204ENST00000422770 ATRNL1Q5VV63 1379 aa11.66□□□□□ -0.54
HERC3-204ENST00000422770 PHIPQ8WWQ0 1821 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 CCL15-CCL14A0A0B4J2E2 113 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 TCRBV5S4A2TA0A5A2 114 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 TRIM6-TRIM34B2RNG4 842 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 NPM3O75607 178 aaKnown RBP11.65□□□□□ -0.54
HERC3-204ENST00000422770 CHGBP05060 677 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 CCL15Q16663 113 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 LRRFIP1Q32MZ4 808 aaKnown RBP11.65□□□□□ -0.54
HERC3-204ENST00000422770 TMED8Q6PL24 325 aaPredicted RBP11.65□□□□□ -0.54
HERC3-204ENST00000422770 CHD1LQ86WJ1 897 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 SMC5Q8IY18 1101 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 KBTBD3Q8NAB2 608 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 PI4K2BQ8TCG2 481 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 SDR42E1Q8WUS8 393 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 DDRGK1Q96HY6 314 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 RIOK1Q9BRS2 568 aaKnown RBP11.65□□□□□ -0.54
HERC3-204ENST00000422770 MCM9Q9NXL9 1143 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 PI4KBQ9UBF8 816 aa11.65□□□□□ -0.54
HERC3-204ENST00000422770 PTPRFP10586 1907 aa11.64□□□□□ -0.55
HERC3-204ENST00000422770 SPDYE5A6NIY4 337 aa11.64□□□□□ -0.55
HERC3-204ENST00000422770 GTF2A2P52657 109 aa11.64□□□□□ -0.55
HERC3-204ENST00000422770 PDE1AP54750 535 aa11.64□□□□□ -0.55
HERC3-204ENST00000422770 NUCB1Q02818 461 aa11.64□□□□□ -0.55
HERC3-204ENST00000422770 OTUD7BQ6GQQ9 843 aa11.64□□□□□ -0.55
HERC3-204ENST00000422770 SKAP1Q86WV1 359 aa11.64□□□□□ -0.55
HERC3-204ENST00000422770 AMOTL1Q8IY63 956 aa11.64□□□□□ -0.55
HERC3-204ENST00000422770 SCYL3Q8IZE3 742 aa11.64□□□□□ -0.55
HERC3-204ENST00000422770 PRDM10Q9NQV6 1147 aa11.64□□□□□ -0.55
HERC3-204ENST00000422770 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.64□□□□□ -0.55
HERC3-204ENST00000422770 IRF6O14896 467 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 RNF113AO15541 343 aaKnown RBP11.63□□□□□ -0.55
HERC3-204ENST00000422770 PRKAB2O43741 272 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 TBC1D8O95759 1140 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 PPIL2Q13356 520 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 SNAPC2Q13487 334 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 UBE3CQ15386 1083 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 TTC6Q86TZ1 520 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 CCDC84Q86UT8 332 aaPredicted RBP11.63□□□□□ -0.55
HERC3-204ENST00000422770 IFNL1Q8IU54 200 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 RILPL2Q969X0 211 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 SAGE1Q9NXZ1 904 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 HERC5Q9UII4 1024 aaKnown RBP11.63□□□□□ -0.55
HERC3-204ENST00000422770 ZNF112Q9UJU3 913 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 SLC4A4Q9Y6R1 1079 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 ZHX2Q9Y6X8 837 aa11.63□□□□□ -0.55
HERC3-204ENST00000422770 TRIM75PA6NK02 468 aa11.62□□□□□ -0.55
HERC3-204ENST00000422770 PHF20L1A8MW92 1017 aa11.62□□□□□ -0.55
HERC3-204ENST00000422770 CTNND1O60716 968 aaKnown RBP11.62□□□□□ -0.55
HERC3-204ENST00000422770 GDF11O95390 407 aa11.62□□□□□ -0.55
HERC3-204ENST00000422770 APPP05067 770 aa11.62□□□□□ -0.55
HERC3-204ENST00000422770 ZFYP08048 801 aaPredicted RBP11.62□□□□□ -0.55
HERC3-204ENST00000422770 CETPP11597 493 aa11.62□□□□□ -0.55
HERC3-204ENST00000422770 TM4SF4P48230 202 aa11.62□□□□□ -0.55
HERC3-204ENST00000422770 INHBEP58166 350 aa11.62□□□□□ -0.55
HERC3-204ENST00000422770 PPATQ06203 517 aa11.62□□□□□ -0.55
HERC3-204ENST00000422770 NOL9Q5SY16 702 aaKnown RBP11.62□□□□□ -0.55
HERC3-204ENST00000422770 GADL1Q6ZQY3 521 aa11.62□□□□□ -0.55
HERC3-204ENST00000422770 APPBP2Q92624 585 aa11.62□□□□□ -0.55
HERC3-204ENST00000422770 PUS7LQ9H0K6 701 aaKnown RBP11.62□□□□□ -0.55
HERC3-204ENST00000422770 SALL3Q9BXA9 1300 aa11.61□□□□□ -0.55
HERC3-204ENST00000422770 IGF2BP3O00425 579 aaKnown RBP eCLIP11.61□□□□□ -0.55
HERC3-204ENST00000422770 TBC1D12O60347 775 aa11.61□□□□□ -0.55
HERC3-204ENST00000422770 ALDH1A1P00352 501 aa11.61□□□□□ -0.55
HERC3-204ENST00000422770 PTPRAP18433 802 aa11.61□□□□□ -0.55
HERC3-204ENST00000422770 TAF1CQ15572 869 aaPredicted RBP11.61□□□□□ -0.55
HERC3-204ENST00000422770 FOXP4Q8IVH2 680 aaPredicted RBP11.61□□□□□ -0.55
HERC3-204ENST00000422770 STK11IPQ8N1F8 1099 aa11.61□□□□□ -0.55
HERC3-204ENST00000422770 BRI3BPQ8WY22 251 aa11.61□□□□□ -0.55
HERC3-204ENST00000422770 EVI5LQ96CN4 794 aa11.61□□□□□ -0.55
HERC3-204ENST00000422770 DCP1AQ9NPI6 582 aaPredicted RBP11.61□□□□□ -0.55
HERC3-204ENST00000422770 SERPINB13Q9UIV8 391 aa11.61□□□□□ -0.55
HERC3-204ENST00000422770 M0R2C6 588 aa11.6□□□□□ -0.55
HERC3-204ENST00000422770 MPHOSPH10O00566 681 aaKnown RBP11.6□□□□□ -0.55
HERC3-204ENST00000422770 GPAA1O43292 621 aa11.6□□□□□ -0.55
HERC3-204ENST00000422770 CAPN15O75808 1086 aa11.6□□□□□ -0.55
HERC3-204ENST00000422770 CYP2D6P10635 497 aa11.6□□□□□ -0.55
HERC3-204ENST00000422770 CAP2P40123 477 aa11.6□□□□□ -0.55
HERC3-204ENST00000422770 TDO2P48775 406 aa11.6□□□□□ -0.55
HERC3-204ENST00000422770 OSBP2Q969R2 916 aa11.6□□□□□ -0.55
HERC3-204ENST00000422770 MS4A4AQ96JQ5 239 aa11.6□□□□□ -0.55
HERC3-204ENST00000422770 DNAJC18Q9H819 358 aa11.6□□□□□ -0.55
HERC3-204ENST00000422770 ATP8A2Q9NTI2 1148 aa11.6□□□□□ -0.55
HERC3-204ENST00000422770 STAP2Q9UGK3 403 aa11.6□□□□□ -0.55
HERC3-204ENST00000422770 CYP2D7A0A087X1C5 515 aa11.59□□□□□ -0.55
HERC3-204ENST00000422770 ECM2O94769 699 aaPredicted RBP11.59□□□□□ -0.55
HERC3-204ENST00000422770 PLCD1P51178 756 aa11.59□□□□□ -0.55
HERC3-204ENST00000422770 CRHR2Q13324 411 aa11.59□□□□□ -0.55
HERC3-204ENST00000422770 RAB3GAP1Q15042 981 aa11.59□□□□□ -0.55
HERC3-204ENST00000422770 PLEKHM2Q8IWE5 1019 aa11.59□□□□□ -0.55
HERC3-204ENST00000422770 SEC62Q99442 399 aaKnown RBP11.59□□□□□ -0.55
HERC3-204ENST00000422770 AS3MTQ9HBK9 375 aa11.59□□□□□ -0.55
HERC3-204ENST00000422770 LOC285556D6RIA3 1793 aa11.59□□□□□ -0.55
HERC3-204ENST00000422770 USP17L5A8MUK1 530 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 MINDY4BA8MYZ0 360 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 BTBD19C9JJ37 291 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 USP17L12C9JPN9 530 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms