RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 NOL8Q76FK4 1167 aaKnown RBP10.62□□□□□ -0.71
HPS4-204ENST00000422379 GPC2Q8N158 579 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 OGFOD1Q8N543 542 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 STAG1Q8WVM7 1258 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 IDI2Q9BXS1 227 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 OSBPL5Q9H0X9 879 aaPredicted RBP10.62□□□□□ -0.71
HPS4-204ENST00000422379 SENP2Q9HC62 589 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 GPRC5DQ9NZD1 345 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 ZNF70Q9UC06 446 aaPredicted RBP10.62□□□□□ -0.71
HPS4-204ENST00000422379 SIPA1L1O43166 1804 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 ROBO3Q96MS0 1386 aa10.61□□□□□ -0.71
HPS4-204ENST00000422379 HIRAP54198 1017 aaPredicted RBP10.61□□□□□ -0.71
HPS4-204ENST00000422379 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
HPS4-204ENST00000422379 BLOC1S2Q6QNY1 142 aa10.61□□□□□ -0.71
HPS4-204ENST00000422379 ARPP21Q9UBL0 812 aaPredicted RBP10.61□□□□□ -0.71
HPS4-204ENST00000422379 CYP46A1Q9Y6A2 500 aa10.61□□□□□ -0.71
HPS4-204ENST00000422379 TCP10L2B9ZVM9 353 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 ST3GAL1Q11201 340 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 KRT32Q14532 448 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 CERS3Q8IU89 383 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 DNAJC18Q9H819 358 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 PDRG1Q9NUG6 133 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 ZSWIM5Q9P217 1185 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 PGAP2Q9UHJ9 254 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 HDAC9Q9UKV0 1011 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 FAM196BA6NMK8 535 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 ST18O60284 1047 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 KDM4AO75164 1064 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 HSP90AA1P07900 732 aaKnown RBP10.6□□□□□ -0.71
HPS4-204ENST00000422379 GABPAQ06546 454 aa10.6□□□□□ -0.71
HPS4-204ENST00000422379 SHROOM1Q2M3G4 852 aaPredicted RBP10.6□□□□□ -0.71
HPS4-204ENST00000422379 DHX32Q7L7V1 743 aaKnown RBP10.6□□□□□ -0.71
HPS4-204ENST00000422379 PRC1O43663 620 aa10.59□□□□□ -0.71
HPS4-204ENST00000422379 GRIN3BO60391 1043 aa10.59□□□□□ -0.71
HPS4-204ENST00000422379 FAM47AQ5JRC9 791 aa10.59□□□□□ -0.71
HPS4-204ENST00000422379 RRP12Q5JTH9 1297 aaKnown RBP10.59□□□□□ -0.71
HPS4-204ENST00000422379 MFSD6Q6ZSS7 791 aa10.59□□□□□ -0.71
HPS4-204ENST00000422379 Q6ZUG5 572 aa10.59□□□□□ -0.71
HPS4-204ENST00000422379 ZKSCAN3Q9BRR0 538 aa10.59□□□□□ -0.71
HPS4-204ENST00000422379 TPCN1Q9ULQ1 816 aa10.59□□□□□ -0.71
HPS4-204ENST00000422379 MYH1P12882 1939 aa10.59□□□□□ -0.71
HPS4-204ENST00000422379 POTECB2RU33 542 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 NMT2O60551 498 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 POLR3DP05423 398 aaPredicted RBP10.58□□□□□ -0.72
HPS4-204ENST00000422379 PSMA5P28066 241 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 KIF4BQ2VIQ3 1234 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 DLK2Q6UY11 383 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 NCOA7Q8NI08 942 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 TMX3Q96JJ7 454 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 AGXT2Q9BYV1 514 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 TMEM39BQ9GZU3 492 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 VEZTQ9HBM0 779 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 CIZ1Q9ULV3 898 aaPredicted RBP10.58□□□□□ -0.72
HPS4-204ENST00000422379 ATRNL1Q5VV63 1379 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 ORC4O43929 436 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 RASA1P20936 1047 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 CDK8P49336 464 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 RRP1BQ14684 758 aaKnown RBP10.58□□□□□ -0.72
HPS4-204ENST00000422379 ME3Q16798 604 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 SAMD1Q6SPF0 538 aaPredicted RBP10.58□□□□□ -0.72
HPS4-204ENST00000422379 C16orf86Q6ZW13 317 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 IGDCC4Q8TDY8 1250 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 BRF1Q92994 677 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.58□□□□□ -0.72
HPS4-204ENST00000422379 BRPF3Q9ULD4 1205 aa10.58□□□□□ -0.72
HPS4-204ENST00000422379 MCM5P33992 734 aa10.57□□□□□ -0.72
HPS4-204ENST00000422379 SHMT1P34896 483 aa10.57□□□□□ -0.72
HPS4-204ENST00000422379 DEKP35659 375 aaKnown RBP10.57□□□□□ -0.72
HPS4-204ENST00000422379 JAG1P78504 1218 aa10.57□□□□□ -0.72
HPS4-204ENST00000422379 APOBRQ0VD83 1088 aa10.57□□□□□ -0.72
HPS4-204ENST00000422379 RALYLQ86SE5 291 aaKnown RBP10.57□□□□□ -0.72
HPS4-204ENST00000422379 TEPSINQ96N21 525 aa10.57□□□□□ -0.72
HPS4-204ENST00000422379 ALDH8A1Q9H2A2 487 aaPredicted RBP10.57□□□□□ -0.72
HPS4-204ENST00000422379 IL17RBQ9NRM6 502 aa10.57□□□□□ -0.72
HPS4-204ENST00000422379 TOMM22Q9NS69 142 aa10.57□□□□□ -0.72
HPS4-204ENST00000422379 HACL1Q9UJ83 578 aa10.57□□□□□ -0.72
HPS4-204ENST00000422379 SH2B2O14492 632 aaPredicted RBP10.56□□□□□ -0.72
HPS4-204ENST00000422379 RANBP6O60518 1105 aaKnown RBP10.56□□□□□ -0.72
HPS4-204ENST00000422379 ENTPD3O75355 529 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 RAB11FIP4Q86YS3 637 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 NECAB1Q8N987 351 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 L3MBTL3Q96JM7 780 aaPredicted RBP10.56□□□□□ -0.72
HPS4-204ENST00000422379 LY9Q9HBG7 655 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 H7C1D1 291 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 HMGB1P09429 215 aaKnown RBP10.56□□□□□ -0.72
HPS4-204ENST00000422379 RASA3Q14644 834 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 SEC23AQ15436 765 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 ANGEL2Q5VTE6 544 aaKnown RBP10.56□□□□□ -0.72
HPS4-204ENST00000422379 FKBP1CQ5VVH2 108 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 PRAMEF18Q5VWM3 479 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 RCSD1Q6JBY9 416 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 METTL16Q86W50 562 aaKnown RBP10.56□□□□□ -0.72
HPS4-204ENST00000422379 CLEC10AQ8IUN9 316 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 FBXL16Q8N461 479 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 FAM151AQ8WW52 585 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 RNF41Q9H4P4 317 aaPredicted RBP10.56□□□□□ -0.72
HPS4-204ENST00000422379 CNNM2Q9H8M5 875 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 SERPINB13Q9UIV8 391 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 HPS5Q9UPZ3 1129 aa10.56□□□□□ -0.72
HPS4-204ENST00000422379 COL2A1P02458 1487 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms