RNA–Protein interactions for RNA: ENST00000422221.1

CLIC4P3-201, Transcript of chloride intracellular channel 4 pseudogene 3, humanhuman

BASIC

Gene CLIC4P3, Length 752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4P3-201ENST00000422221 ECM29Q5VYK3 1845 aa9.5□□□□□ -0.89
CLIC4P3-201ENST00000422221 GYG1P46976 350 aa9.5□□□□□ -0.89
CLIC4P3-201ENST00000422221 VGLL4Q14135 290 aa9.5□□□□□ -0.89
CLIC4P3-201ENST00000422221 LDHAL6AQ6ZMR3 332 aa9.5□□□□□ -0.89
CLIC4P3-201ENST00000422221 CRIPAKQ8N1N5 446 aa9.5□□□□□ -0.89
CLIC4P3-201ENST00000422221 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLIC4P3-201ENST00000422221 PUS3Q9BZE2 481 aaKnown RBP9.5□□□□□ -0.89
CLIC4P3-201ENST00000422221 TMEM39BQ9GZU3 492 aa9.5□□□□□ -0.89
CLIC4P3-201ENST00000422221 TTF2Q9UNY4 1162 aaKnown RBP9.5□□□□□ -0.89
CLIC4P3-201ENST00000422221 COL6A3P12111 3177 aa9.5□□□□□ -0.89
CLIC4P3-201ENST00000422221 RBBP6Q7Z6E9 1792 aaKnown RBP9.5□□□□□ -0.89
CLIC4P3-201ENST00000422221 CCL15-CCL14A0A0B4J2E2 113 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 TCP10L2B9ZVM9 353 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 NR1I2O75469 434 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 HIBADHP31937 336 aaKnown RBP9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 CCL15Q16663 113 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 PUS10Q3MIT2 529 aaKnown RBP9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 MFSD14BQ5SR56 506 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 KCNV2Q8TDN2 545 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 KAZALD1Q96I82 304 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 ARHGAP39Q9C0H5 1083 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 ZFYVE28Q9HCC9 887 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 CHMP3Q9Y3E7 222 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 IL16Q14005 1332 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 TRIOBPQ9H2D6 2365 aa9.49□□□□□ -0.89
CLIC4P3-201ENST00000422221 A0A1B0GUL6 1792 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 H0YGN5 161 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 CRKP46108 304 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 GTF2A2P52657 109 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 FOXC1Q12948 553 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 TNFAIP1Q13829 316 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 UBE4AQ14139 1066 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 TAF1CQ15572 869 aaPredicted RBP9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 CCDC57Q2TAC2 916 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 SLC9C1Q4G0N8 1177 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 FBXO33Q7Z6M2 555 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 NBPF11Q86T75 865 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 SH3TC2Q8TF17 1288 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 CNNM1Q9NRU3 951 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 TOR4AQ9NXH8 423 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 RIPOR2Q9Y4F9 1068 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 SNCAIPQ9Y6H5 919 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 FANCIQ9NVI1 1328 aa9.48□□□□□ -0.89
CLIC4P3-201ENST00000422221 OTOFQ9HC10 1997 aa9.47□□□□□ -0.89
CLIC4P3-201ENST00000422221 SPDYE5A6NIY4 337 aa9.47□□□□□ -0.89
CLIC4P3-201ENST00000422221 BTBD19C9JJ37 291 aa9.47□□□□□ -0.89
CLIC4P3-201ENST00000422221 GRM8O00222 908 aa9.47□□□□□ -0.89
CLIC4P3-201ENST00000422221 TLR2O60603 784 aa9.47□□□□□ -0.89
CLIC4P3-201ENST00000422221 MYCP01106 439 aaPredicted RBP9.47□□□□□ -0.89
CLIC4P3-201ENST00000422221 AVPP01185 164 aa9.47□□□□□ -0.89
CLIC4P3-201ENST00000422221 CTGFP29279 349 aa9.47□□□□□ -0.89
CLIC4P3-201ENST00000422221 CACNB3P54284 484 aa9.47□□□□□ -0.89
CLIC4P3-201ENST00000422221 EXOSC9Q06265 439 aaKnown RBP9.47□□□□□ -0.89
CLIC4P3-201ENST00000422221 ZKSCAN4Q969J2 545 aaPredicted RBP9.47□□□□□ -0.89
CLIC4P3-201ENST00000422221 IRF6O14896 467 aa9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 LACTBP83111 547 aaPredicted RBP9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 HDLBPQ00341 1268 aaKnown RBP9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 ARHGEF6Q15052 776 aa9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 SLC4A8Q2Y0W8 1093 aa9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 TAF7LQ5H9L4 462 aa9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 LCE2CQ5TA81 110 aa9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 APOBEC3HQ6NTF7 200 aaKnown RBP9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 C17orf99Q6UX52 265 aa9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 PXYLP1Q8TE99 480 aa9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 SUCLG2Q96I99 432 aa9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 MRIQ9BWK5 157 aa9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 IQSEC3Q9UPP2 1182 aaPredicted RBP9.46□□□□□ -0.9
CLIC4P3-201ENST00000422221 ZSWIM8A7E2V4 1837 aa9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 LAMA3Q16787 3333 aa9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 CETPP11597 493 aa9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 TNNI2P48788 182 aa9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 MTFR1Q15390 333 aa9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 LRRC24Q50LG9 513 aa9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 ERO1BQ86YB8 467 aa9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 WDR63Q8IWG1 891 aa9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 SHISA4Q96DD7 197 aa9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 SPSB2Q99619 263 aa9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 ZCCHC17Q9NP64 241 aaKnown RBP9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 GMPR2Q9P2T1 348 aaKnown RBP9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 CSADQ9Y600 493 aa9.45□□□□□ -0.9
CLIC4P3-201ENST00000422221 ALDH1L1O75891 902 aa9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 NBPF7P0C2Y1 421 aaPredicted RBP9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 CHAF1AQ13111 956 aaPredicted RBP9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 SNAPC2Q13487 334 aa9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 MOGSQ13724 837 aa9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 FKBP1CQ5VVH2 108 aa9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 UBE2Q1Q7Z7E8 422 aa9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 FAM83AQ86UY5 434 aa9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 VGLL2Q8N8G2 317 aa9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 TRIM47Q96LD4 638 aa9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 ZDHHC15Q96MV8 337 aa9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 WRNIP1Q96S55 665 aa9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 C9orf78Q9NZ63 289 aaPredicted RBP9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 SALL2Q9Y467 1007 aaPredicted RBP9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 CACNA1FO60840 1977 aa9.44□□□□□ -0.9
CLIC4P3-201ENST00000422221 UTYO14607 1347 aa9.43□□□□□ -0.9
CLIC4P3-201ENST00000422221 MROH5Q6ZUA9 1318 aa9.43□□□□□ -0.9
CLIC4P3-201ENST00000422221 GNRH1P01148 92 aa9.43□□□□□ -0.9
CLIC4P3-201ENST00000422221 INPP5BP32019 993 aa9.43□□□□□ -0.9
CLIC4P3-201ENST00000422221 NFX1Q12986 1120 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms