RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 SNAP23O00161 211 aa9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 HIRAP54198 1017 aaPredicted RBP9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 HTRA3P83110 453 aa9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 UBE4AQ14139 1066 aa9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 AGERQ15109 404 aa9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 TBC1D10BQ4KMP7 808 aaPredicted RBP9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 FTSJ3Q8IY81 847 aaKnown RBP9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 OGFOD1Q8N543 542 aa9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 DNAJC5GQ8N7S2 189 aa9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 MEIS3Q99687 375 aa9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 CD209Q9NNX6 404 aa9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 PGAP2Q9UHJ9 254 aa9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 LRRFIP2Q9Y608 721 aaKnown RBP9.42□□□□□ -0.9
AC012560.1-202ENST00000421324 MYO3BQ8WXR4 1341 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 PASKQ96RG2 1323 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 SHTN1A0MZ66 631 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 TMEM88BA6NKF7 163 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 EYA2O00167 538 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 PDE8BO95263 885 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 KLRK1P26718 216 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 HIBADHP31937 336 aaKnown RBP9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 GRM5P41594 1212 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 MMP14P50281 582 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 GTF2IP78347 998 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 LRRC24Q50LG9 513 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 DACT2Q5SW24 774 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 CDC37L1Q7L3B6 337 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 VPS37DQ86XT2 251 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 TRMT44Q8IYL2 757 aaKnown RBP9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 DZIP1LQ8IYY4 767 aaKnown RBP9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 KLHDC4Q8TBB5 520 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 TRPM4Q8TD43 1214 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 DCPSQ96C86 337 aaKnown RBP9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 LTBP1Q14766 1721 aa9.41□□□□□ -0.9
AC012560.1-202ENST00000421324 SASH1O94885 1247 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 ADH1CP00326 375 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 GNAI2P04899 355 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 IL1R1P14778 569 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 RFX5P48382 616 aaPredicted RBP9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 ZNF280AP59817 542 aaPredicted RBP9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 PTPN12Q05209 780 aaKnown RBP9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 KIF4BQ2VIQ3 1234 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 CAVIN4Q5BKX8 364 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 TMEM57Q8N5G2 664 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 KLRG1Q96E93 195 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 FAM84BQ96KN1 310 aaPredicted RBP9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 GMLQ99445 158 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 OCSTAMPQ9BR26 566 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 KLF16Q9BXK1 252 aaPredicted RBP9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 TRIM34Q9BYJ4 488 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 ATP13A2Q9NQ11 1180 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 HDAC9Q9UKV0 1011 aa9.4□□□□□ -0.9
AC012560.1-202ENST00000421324 SRGAP3O43295 1099 aa9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 FRAT2O75474 233 aaPredicted RBP9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 CIAO1O76071 339 aa9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 IFIT1P09914 478 aaKnown RBP9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 GYG1P46976 350 aa9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 NNTQ13423 1086 aa9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 USP48Q86UV5 1035 aa9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 MXD3Q9BW11 206 aa9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 GLIS2Q9BZE0 524 aaPredicted RBP9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 SIL1Q9H173 461 aa9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 MYOZ2Q9NPC6 264 aa9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 GMPR2Q9P2T1 348 aaKnown RBP9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 ABT1Q9ULW3 272 aaKnown RBP9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 TNNQ9UQP3 1299 aa9.39□□□□□ -0.91
AC012560.1-202ENST00000421324 SPEF2Q9C093 1822 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 IRS2Q9Y4H2 1338 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 TRAF5O00463 557 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 EGFRP00533 1210 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 SLC5A1P13866 664 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 IL15P40933 162 aaPredicted RBP9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 SCARF1Q14162 830 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 PUM3Q15397 648 aaKnown RBP9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 KRT26Q7Z3Y9 468 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 KIAA0825Q8IV33 1275 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 ITPRIPQ8IWB1 547 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 TDRD7Q8NHU6 1098 aaKnown RBP9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 LPIN2Q92539 896 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 COPRSQ9NQ92 184 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 MAP4K5Q9Y4K4 846 aa9.38□□□□□ -0.91
AC012560.1-202ENST00000421324 CELF2O95319 508 aaKnown RBP9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 FKBP1AP62942 108 aaKnown RBP9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 FMR1Q06787 632 aaKnown RBP eCLIP9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 NR5A1Q13285 461 aa9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 MTX1Q13505 466 aa9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 DEFB115Q30KQ5 88 aa9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 ATG9AQ7Z3C6 839 aa9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 FBXO33Q7Z6M2 555 aa9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 VGLL2Q8N8G2 317 aa9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 ZNF408Q9H9D4 720 aa9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 RCAN3Q9UKA8 241 aa9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 PA2G4Q9UQ80 394 aaKnown RBP9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 GPSM3Q9Y4H4 160 aa9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 ZNF609O15014 1411 aa9.37□□□□□ -0.91
AC012560.1-202ENST00000421324 FAM205AQ6ZU69 1335 aa9.36□□□□□ -0.91
AC012560.1-202ENST00000421324 MAGEB6P1A0A0J9YX57 407 aa9.36□□□□□ -0.91
AC012560.1-202ENST00000421324 F8W031 263 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms