RNA–Protein interactions for RNA: ENST00000421049.1

PAXBP1-203, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 3

Gene PAXBP1, Length 339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-203ENST00000421049 F13A1P00488 732 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 FAM87AP0C7U9 286 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 GRK4P32298 578 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 NTF4P34130 210 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 FANCCQ00597 558 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 RPL6Q02878 288 aaKnown RBP6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 ZNF765Q7L2R6 523 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 CYFIP1Q7L576 1253 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 TOP6BLQ8N6T0 577 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 KCT2Q8NC54 265 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 ZNF507Q8TCN5 953 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 LRRC4CQ9HCJ2 640 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 C1GALT1Q9NS00 363 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 RNF112Q9ULX5 631 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 LEMD3Q9Y2U8 911 aa6.32□□□□□ -1.4
PAXBP1-203ENST00000421049 TLR3O15455 904 aaKnown RBP6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 VAMP1P23763 118 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 SSTR4P31391 388 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 GRIK1P39086 918 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 CYP27A1Q02318 531 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 LDLRAD1Q5T700 205 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 DUSP27Q5VZP5 1158 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 SEZ6L2Q6UXD5 910 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 CCDC84Q86UT8 332 aaPredicted RBP6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 GATAD2BQ8WXI9 593 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 GATA6Q92908 595 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 WNT10AQ9GZT5 417 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 FBRSQ9HAH7 460 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 PIM2Q9P1W9 311 aa6.31□□□□□ -1.4
PAXBP1-203ENST00000421049 SCAMP3O14828 347 aaKnown RBP6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 PGRP06401 933 aa6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 EIF4A3P38919 411 aaKnown RBP6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 RBM25P49756 843 aaKnown RBP6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 RING1Q06587 406 aa6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 PDE4BQ07343 736 aa6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 CPSF6Q16630 551 aaKnown RBP eCLIP6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 ARHGAP27Q6ZUM4 889 aa6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 USP48Q86UV5 1035 aa6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 RNF34Q969K3 372 aa6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 METTL5Q9NRN9 209 aaKnown RBP6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 KIAA1522Q9P206 1035 aaPredicted RBP6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 SUPT16HQ9Y5B9 1047 aaKnown RBP6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 PCDHGB7Q9Y5F8 929 aa6.3□□□□□ -1.4
PAXBP1-203ENST00000421049 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 PRR19A6NJB7 356 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 CYP26A1O43174 497 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 GRIN3BO60391 1043 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 COBLO75128 1261 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 CILPO75339 1184 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 LEFTY1O75610 366 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 LRP8Q14114 963 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 CYP27C1Q4G0S4 372 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 ZNF394Q53GI3 561 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 FBXO27Q8NI29 283 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 ZNF428Q96B54 188 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 DPH2Q9BQC3 489 aaPredicted RBP6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 PCMTD2Q9NV79 361 aa6.29□□□□□ -1.4
PAXBP1-203ENST00000421049 FAM221AA4D161 298 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 GFRA2O00451 464 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 MPP2Q14168 576 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 NKG7Q16617 165 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 CWF19L2Q2TBE0 894 aaKnown RBP6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 FBXL19Q6PCT2 694 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 FAM196AQ6ZSG2 479 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 KIAA0825Q8IV33 1275 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 HID1Q8IV36 788 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 XAGE3Q8WTP9 111 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 MIPEPQ99797 713 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 DUSP23Q9BVJ7 150 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 PRDM10Q9NQV6 1147 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 ADAMTS1Q9UHI8 967 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 CORINQ9Y5Q5 1042 aa6.28□□□□□ -1.4
PAXBP1-203ENST00000421049 LRIG2O94898 1065 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 FOSL1P15407 271 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 PLCG1P19174 1290 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 GARTP22102 1010 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 HOXA10P31260 410 aaPredicted RBP6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 APOBRQ0VD83 1088 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 PRAMEF13Q5VWM6 474 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 OGFOD3Q6PK18 319 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 REC114Q7Z4M0 266 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 ZNF296Q8WUU4 475 aaPredicted RBP6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 SPON2Q9BUD6 331 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 FOXQ1Q9C009 403 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 KLHL3Q9UH77 587 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 TACC3Q9Y6A5 838 aa6.27□□□□□ -1.41
PAXBP1-203ENST00000421049 ITIH2P19823 946 aa6.26□□□□□ -1.41
PAXBP1-203ENST00000421049 CD97P48960 835 aa6.26□□□□□ -1.41
PAXBP1-203ENST00000421049 SLBPQ14493 270 aaKnown RBP eCLIP6.26□□□□□ -1.41
PAXBP1-203ENST00000421049 INTS5Q6P9B9 1019 aaKnown RBP6.26□□□□□ -1.41
PAXBP1-203ENST00000421049 FAM181AQ8N9Y4 354 aa6.26□□□□□ -1.41
PAXBP1-203ENST00000421049 FAM13CQ8NE31 585 aa6.26□□□□□ -1.41
PAXBP1-203ENST00000421049 TMEM87BQ96K49 555 aa6.26□□□□□ -1.41
PAXBP1-203ENST00000421049 UBP1Q9NZI7 540 aa6.26□□□□□ -1.41
PAXBP1-203ENST00000421049 TTBK1Q5TCY1 1321 aaPredicted RBP6.25□□□□□ -1.41
PAXBP1-203ENST00000421049 CRKP46108 304 aa6.25□□□□□ -1.41
PAXBP1-203ENST00000421049 HDLBPQ00341 1268 aaKnown RBP6.25□□□□□ -1.41
PAXBP1-203ENST00000421049 SEZ6Q53EL9 994 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms