RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 FMNL1O95466 1100 aaPredicted RBP21.29■■□□□ 1
MSH6-203ENST00000420813 BAG3O95817 575 aa21.29■■□□□ 1
MSH6-203ENST00000420813 PLCG2P16885 1265 aa21.29■■□□□ 1
MSH6-203ENST00000420813 SLC4A8Q2Y0W8 1093 aa21.29■■□□□ 1
MSH6-203ENST00000420813 TBC1D2Q9BYX2 928 aa21.29■■□□□ 1
MSH6-203ENST00000420813 SNRKQ9NRH2 765 aa21.29■■□□□ 1
MSH6-203ENST00000420813 HERC5Q9UII4 1024 aaKnown RBP21.29■■□□□ 1
MSH6-203ENST00000420813 DOCK3Q8IZD9 2030 aa21.29■■□□□ 1
MSH6-203ENST00000420813 TRIM75PA6NK02 468 aa21.28■■□□□ 1
MSH6-203ENST00000420813 CYP2E1P05181 493 aaPredicted RBP21.28■■□□□ 1
MSH6-203ENST00000420813 FCGRTP55899 365 aa21.28■■□□□ 1
MSH6-203ENST00000420813 PPP4CP60510 307 aa21.28■■□□□ 1
MSH6-203ENST00000420813 SH3RF3Q8TEJ3 882 aaPredicted RBP21.28■■□□□ 1
MSH6-203ENST00000420813 MYPNQ86TC9 1320 aa21.28■■□□□ 1
MSH6-203ENST00000420813 FAM196BA6NMK8 535 aa21.27■■□□□ 1
MSH6-203ENST00000420813 RAET1EQ8TD07 263 aa21.27■■□□□ 1
MSH6-203ENST00000420813 DHX36Q9H2U1 1008 aaKnown RBP21.27■■□□□ 1
MSH6-203ENST00000420813 PI4KBQ9UBF8 816 aa21.27■■□□□ 1
MSH6-203ENST00000420813 DBNLQ9UJU6 430 aaKnown RBP21.27■■□□□ 1
MSH6-203ENST00000420813 AGTPBP1Q9UPW5 1226 aa21.27■■□□□ 1
MSH6-203ENST00000420813 MYH1P12882 1939 aa21.27■■□□□ 1
MSH6-203ENST00000420813 ECM2O94769 699 aaPredicted RBP21.26■□□□□ 0.99
MSH6-203ENST00000420813 CAP2P40123 477 aa21.26■□□□□ 0.99
MSH6-203ENST00000420813 PROCA1Q8NCQ7 364 aaPredicted RBP21.26■□□□□ 0.99
MSH6-203ENST00000420813 GCC1Q96CN9 775 aa21.26■□□□□ 0.99
MSH6-203ENST00000420813 AATFQ9NY61 560 aaKnown RBP eCLIP21.26■□□□□ 0.99
MSH6-203ENST00000420813 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.26■□□□□ 0.99
MSH6-203ENST00000420813 GRK4P32298 578 aa21.25■□□□□ 0.99
MSH6-203ENST00000420813 CEP85Q6P2H3 762 aa21.25■□□□□ 0.99
MSH6-203ENST00000420813 CCDC84Q86UT8 332 aaPredicted RBP21.25■□□□□ 0.99
MSH6-203ENST00000420813 ZNF280CQ8ND82 737 aa21.25■□□□□ 0.99
MSH6-203ENST00000420813 SMCR8Q8TEV9 937 aaPredicted RBP21.25■□□□□ 0.99
MSH6-203ENST00000420813 PNMA3Q9UL41 463 aa21.25■□□□□ 0.99
MSH6-203ENST00000420813 ZAP70P43403 619 aa21.24■□□□□ 0.99
MSH6-203ENST00000420813 ADGRA1Q86SQ6 560 aa21.24■□□□□ 0.99
MSH6-203ENST00000420813 EAF2Q96CJ1 260 aaPredicted RBP21.24■□□□□ 0.99
MSH6-203ENST00000420813 USP17L5A8MUK1 530 aa21.23■□□□□ 0.99
MSH6-203ENST00000420813 MYCP01106 439 aaPredicted RBP21.23■□□□□ 0.99
MSH6-203ENST00000420813 PRKCZQ05513 592 aa21.23■□□□□ 0.99
MSH6-203ENST00000420813 SPP2Q13103 211 aa21.23■□□□□ 0.99
MSH6-203ENST00000420813 ERC1Q8IUD2 1116 aa21.23■□□□□ 0.99
MSH6-203ENST00000420813 AS3MTQ9HBK9 375 aa21.23■□□□□ 0.99
MSH6-203ENST00000420813 PIH1D3Q9NQM4 214 aaKnown RBP21.23■□□□□ 0.99
MSH6-203ENST00000420813 TLR7Q9NYK1 1049 aaKnown RBP21.23■□□□□ 0.99
MSH6-203ENST00000420813 FLT1P17948 1338 aa21.23■□□□□ 0.99
MSH6-203ENST00000420813 RRP1BQ14684 758 aaKnown RBP21.22■□□□□ 0.99
MSH6-203ENST00000420813 TREML2Q5T2D2 321 aa21.22■□□□□ 0.99
MSH6-203ENST00000420813 METTL16Q86W50 562 aaKnown RBP21.22■□□□□ 0.99
MSH6-203ENST00000420813 SLAIN1Q8ND83 568 aa21.22■□□□□ 0.99
MSH6-203ENST00000420813 TGFBRAP1Q8WUH2 860 aa21.22■□□□□ 0.99
MSH6-203ENST00000420813 CCDC8Q9H0W5 538 aaPredicted RBP21.22■□□□□ 0.99
MSH6-203ENST00000420813 MS4A1P11836 297 aa21.21■□□□□ 0.99
MSH6-203ENST00000420813 PABPC4Q13310 644 aaKnown RBP eCLIP21.21■□□□□ 0.99
MSH6-203ENST00000420813 MTFR1Q15390 333 aa21.21■□□□□ 0.99
MSH6-203ENST00000420813 FAM110CQ1W6H9 321 aa21.21■□□□□ 0.99
MSH6-203ENST00000420813 SH3D19Q5HYK7 790 aa21.21■□□□□ 0.99
MSH6-203ENST00000420813 TMED8Q6PL24 325 aaPredicted RBP21.21■□□□□ 0.99
MSH6-203ENST00000420813 CERS3Q8IU89 383 aa21.21■□□□□ 0.99
MSH6-203ENST00000420813 FOXP4Q8IVH2 680 aaPredicted RBP21.21■□□□□ 0.99
MSH6-203ENST00000420813 MAPKAPK5Q8IW41 473 aa21.21■□□□□ 0.99
MSH6-203ENST00000420813 NKX2-3Q8TAU0 364 aa21.21■□□□□ 0.99
MSH6-203ENST00000420813 GINM1Q9NU53 330 aa21.21■□□□□ 0.99
MSH6-203ENST00000420813 CEP290O15078 2479 aa21.2■□□□□ 0.98
MSH6-203ENST00000420813 ASNSP08243 561 aa21.2■□□□□ 0.98
MSH6-203ENST00000420813 UBXN2AP68543 259 aa21.2■□□□□ 0.98
MSH6-203ENST00000420813 PANK1Q8TE04 598 aa21.2■□□□□ 0.98
MSH6-203ENST00000420813 WDR18Q9BV38 432 aa21.2■□□□□ 0.98
MSH6-203ENST00000420813 GABRQQ9UN88 632 aa21.2■□□□□ 0.98
MSH6-203ENST00000420813 TNPO2O14787 897 aaKnown RBP21.19■□□□□ 0.98
MSH6-203ENST00000420813 GJB1P08034 283 aa21.19■□□□□ 0.98
MSH6-203ENST00000420813 CYP7A1P22680 504 aa21.19■□□□□ 0.98
MSH6-203ENST00000420813 GCLCP48506 637 aaPredicted RBP21.19■□□□□ 0.98
MSH6-203ENST00000420813 HMGCS2P54868 508 aa21.19■□□□□ 0.98
MSH6-203ENST00000420813 IRF5Q13568 498 aa21.19■□□□□ 0.98
MSH6-203ENST00000420813 HSP90AB4PQ58FF6 505 aa21.19■□□□□ 0.98
MSH6-203ENST00000420813 ANKRD13CQ8N6S4 541 aa21.19■□□□□ 0.98
MSH6-203ENST00000420813 DNAJC18Q9H819 358 aa21.19■□□□□ 0.98
MSH6-203ENST00000420813 EXOC6BQ9Y2D4 811 aa21.19■□□□□ 0.98
MSH6-203ENST00000420813 IDH1O75874 414 aaKnown RBP21.18■□□□□ 0.98
MSH6-203ENST00000420813 CCL5P13501 91 aa21.18■□□□□ 0.98
MSH6-203ENST00000420813 GJA8P48165 433 aa21.18■□□□□ 0.98
MSH6-203ENST00000420813 FLT3LGP49771 235 aa21.18■□□□□ 0.98
MSH6-203ENST00000420813 CRACR2BQ8N4Y2 399 aaPredicted RBP21.18■□□□□ 0.98
MSH6-203ENST00000420813 PXYLP1Q8TE99 480 aa21.18■□□□□ 0.98
MSH6-203ENST00000420813 SHISA4Q96DD7 197 aa21.18■□□□□ 0.98
MSH6-203ENST00000420813 TRIM34Q9BYJ4 488 aa21.18■□□□□ 0.98
MSH6-203ENST00000420813 BIN2Q9UBW5 565 aaPredicted RBP21.18■□□□□ 0.98
MSH6-203ENST00000420813 PALD1Q9ULE6 856 aa21.18■□□□□ 0.98
MSH6-203ENST00000420813 ADCY3O60266 1144 aa21.17■□□□□ 0.98
MSH6-203ENST00000420813 HLA-DOAP06340 250 aa21.17■□□□□ 0.98
MSH6-203ENST00000420813 AACSQ86V21 672 aa21.17■□□□□ 0.98
MSH6-203ENST00000420813 COA7Q96BR5 231 aa21.17■□□□□ 0.98
MSH6-203ENST00000420813 BACE1P56817 501 aa21.16■□□□□ 0.98
MSH6-203ENST00000420813 DYNLL1P63167 89 aaKnown RBP21.16■□□□□ 0.98
MSH6-203ENST00000420813 MAP3K12Q12852 859 aa21.16■□□□□ 0.98
MSH6-203ENST00000420813 RNF208Q9H0X6 261 aa21.16■□□□□ 0.98
MSH6-203ENST00000420813 ASCC2Q9H1I8 757 aaPredicted RBP21.16■□□□□ 0.98
MSH6-203ENST00000420813 PCDH10Q9P2E7 1040 aa21.16■□□□□ 0.98
MSH6-203ENST00000420813 DDX60LQ5H9U9 1706 aaKnown RBP21.15■□□□□ 0.98
MSH6-203ENST00000420813 C19orf81C9J6K1 198 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms