RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SNED1Q8TER0 1413 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 TNKSO95271 1327 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 CYP2D7A0A087X1C5 515 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 GPR75-ASB3A0A0A6YYF3 556 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 SMIM22K7EJ46 135 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 DDAH1O94760 285 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 SLC3A2P08195 630 aaKnown RBP10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 LIG1P18858 919 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 ALDH1B1P30837 517 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 IARSP41252 1262 aaKnown RBP10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 CCDC173Q0VFZ6 552 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 GRIK5Q16478 980 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 RRP12Q5JTH9 1297 aaKnown RBP10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 C12orf60Q5U649 245 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 C10orf71Q711Q0 1435 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 NBPF11Q86T75 865 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 RAB11FIP4Q86YS3 637 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 ENAHQ8N8S7 591 aaPredicted RBP10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 WASF1Q92558 559 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 MASTLQ96GX5 879 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 PDLIM2Q96JY6 352 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 GPR101Q96P66 508 aaPredicted RBP10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 USP28Q96RU2 1077 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 ZSCAN10Q96SZ4 725 aaPredicted RBP10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 ALG1Q9BT22 464 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 COA1Q9GZY4 146 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 TFIP11Q9UBB9 837 aaKnown RBP10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 RGS17Q9UGC6 210 aaPredicted RBP10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 PARP3Q9Y6F1 533 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 SIPA1L1O43166 1804 aa10.54□□□□□ -0.72
LINCMD1-201ENST00000418518 KIF28PB7ZC32 967 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 BAG3O95817 575 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 MMP10P09238 476 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 CALM1P0DP23 149 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 CALM2P0DP24 149 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 CALM3P0DP25 149 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 PLCG2P16885 1265 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 U2AF2P26368 475 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 GUCY1B3Q02153 619 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 SSRP1Q08945 709 aaKnown RBP10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 FUT2Q10981 343 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 UVSSAQ2YD98 709 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 KRT40Q6A162 431 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 IQCA1Q86XH1 822 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 SLF2Q8IX21 1173 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 ANKS1AQ92625 1134 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 MYL10Q9BUA6 226 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 RNF26Q9BY78 433 aaPredicted RBP10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 NUP62CLQ9H1M0 184 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 CLSTN2Q9H4D0 955 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 TOMM22Q9NS69 142 aa10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 RBM28Q9NW13 759 aaKnown RBP10.53□□□□□ -0.72
LINCMD1-201ENST00000418518 A0A1W2PQ27 194 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 A0A1W2PQ64 194 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 A0A1W2PQD8 194 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 DEXIO95424 95 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 RXRAP19793 462 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 FOSBP53539 338 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 PDE4BQ07343 736 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 TROAPQ12815 778 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 DIXDC1Q155Q3 683 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 CCDC178Q5BJE1 867 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 OTUD7BQ6GQQ9 843 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 STYK1Q6J9G0 422 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 CRACR2BQ8N4Y2 399 aaPredicted RBP10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 FANCBQ8NB91 859 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 LINC00301Q8NCQ3 95 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 KCNG4Q8TDN1 519 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 SH3RF3Q8TEJ3 882 aaPredicted RBP10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 PHKBQ93100 1093 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 CAMKK2Q96RR4 588 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 MAP3K14Q99558 947 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 NOL10Q9BSC4 688 aaKnown RBP10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 TCP11L1Q9NUJ3 509 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 MORC2Q9Y6X9 1032 aaPredicted RBP10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 BAZ2BQ9UIF8 2168 aaKnown RBP10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 PLIN4Q96Q06 1357 aa10.52□□□□□ -0.73
LINCMD1-201ENST00000418518 GOLGA6L4A6NEF3 574 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 PPFIA3O75145 1194 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 CYP2D6P10635 497 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 RHBDL3P58872 404 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 MAP3K11Q16584 847 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 MFSD14BQ5SR56 506 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 IFIT1BQ5T764 474 aaKnown RBP10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 POTEAQ6S8J7 498 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 TRIM22Q8IYM9 498 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 ENGASEQ8NFI3 743 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 AIFM3Q96NN9 605 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 ZKSCAN3Q9BRR0 538 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 FTOQ9C0B1 505 aaKnown RBP eCLIP10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 MCM9Q9NXL9 1143 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 DACT1Q9NYF0 836 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 JAG2Q9Y219 1238 aa10.51□□□□□ -0.73
LINCMD1-201ENST00000418518 MYH4Q9Y623 1939 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 C6orf229H3BNL8 230 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 PRPF3O43395 683 aaKnown RBP10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 MMP1P03956 469 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 USP17L8P0C7I0 530 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms