RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 NOL10Q9BSC4 688 aaKnown RBP25.05■■□□□ 1.6
PKNOX1-202ENST00000418336 MYH7P12883 1935 aa25.05■■□□□ 1.6
PKNOX1-202ENST00000418336 MYH1P12882 1939 aa25.04■■□□□ 1.6
PKNOX1-202ENST00000418336 CTNND1O60716 968 aaKnown RBP25.04■■□□□ 1.6
PKNOX1-202ENST00000418336 CAP1Q01518 475 aa25.04■■□□□ 1.6
PKNOX1-202ENST00000418336 CRHR2Q13324 411 aa25.04■■□□□ 1.6
PKNOX1-202ENST00000418336 DHX36Q9H2U1 1008 aaKnown RBP25.04■■□□□ 1.6
PKNOX1-202ENST00000418336 PALD1Q9ULE6 856 aa25.04■■□□□ 1.6
PKNOX1-202ENST00000418336 ATAD5Q96QE3 1844 aa25.04■■□□□ 1.6
PKNOX1-202ENST00000418336 HTTP42858 3142 aa25.03■■□□□ 1.6
PKNOX1-202ENST00000418336 BTBD19C9JJ37 291 aa25.03■■□□□ 1.6
PKNOX1-202ENST00000418336 JAG1P78504 1218 aa25.03■■□□□ 1.6
PKNOX1-202ENST00000418336 SNAPC2Q13487 334 aa25.03■■□□□ 1.6
PKNOX1-202ENST00000418336 EXOC6Q8TAG9 804 aa25.03■■□□□ 1.6
PKNOX1-202ENST00000418336 PI4K2BQ8TCG2 481 aa25.03■■□□□ 1.6
PKNOX1-202ENST00000418336 MCOLN1Q9GZU1 580 aa25.03■■□□□ 1.6
PKNOX1-202ENST00000418336 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.03■■□□□ 1.6
PKNOX1-202ENST00000418336 PI4KBQ9UBF8 816 aa25.03■■□□□ 1.6
PKNOX1-202ENST00000418336 AFG3L2Q9Y4W6 797 aa25.03■■□□□ 1.6
PKNOX1-202ENST00000418336 CAPN15O75808 1086 aa25.02■■□□□ 1.6
PKNOX1-202ENST00000418336 CETPP11597 493 aa25.02■■□□□ 1.6
PKNOX1-202ENST00000418336 AAMPQ13685 434 aa25.02■■□□□ 1.6
PKNOX1-202ENST00000418336 CERS3Q8IU89 383 aa25.02■■□□□ 1.6
PKNOX1-202ENST00000418336 HERC5Q9UII4 1024 aaKnown RBP25.02■■□□□ 1.6
PKNOX1-202ENST00000418336 SUPT16HQ9Y5B9 1047 aaKnown RBP25.02■■□□□ 1.6
PKNOX1-202ENST00000418336 CCDC84Q86UT8 332 aaPredicted RBP25.01■■□□□ 1.59
PKNOX1-202ENST00000418336 LCORLQ8N3X6 602 aa25.01■■□□□ 1.59
PKNOX1-202ENST00000418336 NAV1Q8NEY1 1877 aa25■■□□□ 1.59
PKNOX1-202ENST00000418336 MAGEB6P1A0A0J9YX57 407 aa25■■□□□ 1.59
PKNOX1-202ENST00000418336 SHROOM1Q2M3G4 852 aaPredicted RBP25■■□□□ 1.59
PKNOX1-202ENST00000418336 GPAT2Q6NUI2 795 aa25■■□□□ 1.59
PKNOX1-202ENST00000418336 ABHD8Q96I13 439 aa25■■□□□ 1.59
PKNOX1-202ENST00000418336 SAP30BPQ9UHR5 308 aaKnown RBP25■■□□□ 1.59
PKNOX1-202ENST00000418336 CXCL11O14625 94 aa24.99■■□□□ 1.59
PKNOX1-202ENST00000418336 CAP2P40123 477 aa24.99■■□□□ 1.59
PKNOX1-202ENST00000418336 EVX2Q03828 476 aa24.99■■□□□ 1.59
PKNOX1-202ENST00000418336 UBE3CQ15386 1083 aa24.99■■□□□ 1.59
PKNOX1-202ENST00000418336 ZCCHC17Q9NP64 241 aaKnown RBP24.99■■□□□ 1.59
PKNOX1-202ENST00000418336 ZHX2Q9Y6X8 837 aa24.99■■□□□ 1.59
PKNOX1-202ENST00000418336 TTC41PQ6P2S7 1318 aa24.98■■□□□ 1.59
PKNOX1-202ENST00000418336 ADGRA2Q96PE1 1338 aa24.98■■□□□ 1.59
PKNOX1-202ENST00000418336 A0A0G2JLL6 359 aaPredicted RBP24.98■■□□□ 1.59
PKNOX1-202ENST00000418336 DGKZQ13574 1117 aa24.98■■□□□ 1.59
PKNOX1-202ENST00000418336 OTUD7BQ6GQQ9 843 aa24.98■■□□□ 1.59
PKNOX1-202ENST00000418336 PRRT2Q7Z6L0 340 aaPredicted RBP24.98■■□□□ 1.59
PKNOX1-202ENST00000418336 FOXP4Q8IVH2 680 aaPredicted RBP24.98■■□□□ 1.59
PKNOX1-202ENST00000418336 FKTNO75072 461 aa24.97■■□□□ 1.59
PKNOX1-202ENST00000418336 IGHDP01880 384 aa24.97■■□□□ 1.59
PKNOX1-202ENST00000418336 CTU1Q7Z7A3 348 aaKnown RBP24.97■■□□□ 1.59
PKNOX1-202ENST00000418336 ANKRD23Q86SG2 305 aa24.97■■□□□ 1.59
PKNOX1-202ENST00000418336 GCC1Q96CN9 775 aa24.97■■□□□ 1.59
PKNOX1-202ENST00000418336 EHD4Q9H223 541 aa24.97■■□□□ 1.59
PKNOX1-202ENST00000418336 LOC285556D6RIA3 1793 aa24.96■■□□□ 1.59
PKNOX1-202ENST00000418336 PLCD1P51178 756 aa24.96■■□□□ 1.59
PKNOX1-202ENST00000418336 TATDN1Q6P1N9 297 aa24.96■■□□□ 1.59
PKNOX1-202ENST00000418336 SMC5Q8IY18 1101 aa24.96■■□□□ 1.59
PKNOX1-202ENST00000418336 ARMT1Q9H993 441 aa24.96■■□□□ 1.59
PKNOX1-202ENST00000418336 PICK1Q9NRD5 415 aa24.96■■□□□ 1.59
PKNOX1-202ENST00000418336 PRKAB2O43741 272 aa24.95■■□□□ 1.58
PKNOX1-202ENST00000418336 USP5P45974 858 aa24.95■■□□□ 1.58
PKNOX1-202ENST00000418336 GABPAQ06546 454 aa24.95■■□□□ 1.58
PKNOX1-202ENST00000418336 TAF1CQ15572 869 aaPredicted RBP24.95■■□□□ 1.58
PKNOX1-202ENST00000418336 SLC4A8Q2Y0W8 1093 aa24.95■■□□□ 1.58
PKNOX1-202ENST00000418336 KBTBD3Q8NAB2 608 aa24.95■■□□□ 1.58
PKNOX1-202ENST00000418336 SDR42E1Q8WUS8 393 aa24.95■■□□□ 1.58
PKNOX1-202ENST00000418336 PUS7LQ9H0K6 701 aaKnown RBP24.95■■□□□ 1.58
PKNOX1-202ENST00000418336 DCP1AQ9NPI6 582 aaPredicted RBP24.95■■□□□ 1.58
PKNOX1-202ENST00000418336 TLR2O60603 784 aa24.93■■□□□ 1.58
PKNOX1-202ENST00000418336 MBD4O95243 580 aa24.93■■□□□ 1.58
PKNOX1-202ENST00000418336 ANKRD45Q5TZF3 282 aa24.93■■□□□ 1.58
PKNOX1-202ENST00000418336 CRNKL1Q9BZJ0 848 aaKnown RBP24.93■■□□□ 1.58
PKNOX1-202ENST00000418336 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.93■■□□□ 1.58
PKNOX1-202ENST00000418336 STAP2Q9UGK3 403 aa24.93■■□□□ 1.58
PKNOX1-202ENST00000418336 ZSWIM8A7E2V4 1837 aa24.93■■□□□ 1.58
PKNOX1-202ENST00000418336 SMIM22K7EJ46 135 aa24.92■■□□□ 1.58
PKNOX1-202ENST00000418336 PDHXO00330 501 aa24.92■■□□□ 1.58
PKNOX1-202ENST00000418336 MX1P20591 662 aa24.92■■□□□ 1.58
PKNOX1-202ENST00000418336 GPATCH3Q96I76 525 aa24.92■■□□□ 1.58
PKNOX1-202ENST00000418336 ZFYVE28Q9HCC9 887 aa24.92■■□□□ 1.58
PKNOX1-202ENST00000418336 BAZ2AQ9UIF9 1905 aaKnown RBP24.91■■□□□ 1.58
PKNOX1-202ENST00000418336 HLA-DOAP06340 250 aa24.91■■□□□ 1.58
PKNOX1-202ENST00000418336 SHMT1P34896 483 aa24.91■■□□□ 1.58
PKNOX1-202ENST00000418336 C17orf99Q6UX52 265 aa24.91■■□□□ 1.58
PKNOX1-202ENST00000418336 OSBP2Q969R2 916 aa24.91■■□□□ 1.58
PKNOX1-202ENST00000418336 SERPINB13Q9UIV8 391 aa24.91■■□□□ 1.58
PKNOX1-202ENST00000418336 TRIM75PA6NK02 468 aa24.9■■□□□ 1.58
PKNOX1-202ENST00000418336 GLRX3O76003 335 aaKnown RBP24.9■■□□□ 1.58
PKNOX1-202ENST00000418336 GDF11O95390 407 aa24.9■■□□□ 1.58
PKNOX1-202ENST00000418336 CYP2D6P10635 497 aa24.9■■□□□ 1.58
PKNOX1-202ENST00000418336 CD99L2Q8TCZ2 262 aa24.9■■□□□ 1.58
PKNOX1-202ENST00000418336 WDR18Q9BV38 432 aa24.9■■□□□ 1.58
PKNOX1-202ENST00000418336 ZBTB21Q9ULJ3 1066 aa24.9■■□□□ 1.58
PKNOX1-202ENST00000418336 CENPFP49454 3210 aa24.89■■□□□ 1.58
PKNOX1-202ENST00000418336 USP17L5A8MUK1 530 aa24.89■■□□□ 1.58
PKNOX1-202ENST00000418336 SP3Q02447 781 aa24.89■■□□□ 1.58
PKNOX1-202ENST00000418336 SH3D19Q5HYK7 790 aa24.89■■□□□ 1.58
PKNOX1-202ENST00000418336 TTC6Q86TZ1 520 aa24.89■■□□□ 1.58
PKNOX1-202ENST00000418336 ZNF280CQ8ND82 737 aa24.89■■□□□ 1.58
PKNOX1-202ENST00000418336 SLC45A1Q9Y2W3 748 aa24.89■■□□□ 1.58
PKNOX1-202ENST00000418336 RNF113AO15541 343 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms