RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 GOLGA6DP0CG33 693 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 MLKLQ8NB16 471 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 JPH2Q9BR39 696 aaPredicted RBP9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 DSCC1Q9BVC3 393 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 GOLGA6AQ9NYA3 693 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 HOOK1Q9UJC3 728 aaKnown RBP9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 FECHP22830 423 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 FNTAP49354 379 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 AKAP17AQ02040 695 aaKnown RBP9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 RBL2Q08999 1139 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 NCAPH2Q6IBW4 605 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 PPFIBP1Q86W92 1011 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 XAGE2Q96GT9 111 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 CRACR2AQ9BSW2 395 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 DACH1Q9UI36 760 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 DBNLQ9UJU6 430 aaKnown RBP9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 TARSL2A2RTX5 802 aaKnown RBP9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 MDM2Q00987 491 aaPredicted RBP9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 PTPAQ15257 358 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 KSR2Q6VAB6 950 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 CHST3Q7LGC8 479 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 CAPS2Q9BXY5 557 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 GJB4Q9NTQ9 266 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 KCNG1Q9UIX4 513 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 MAN1B1Q9UKM7 699 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 MFAP3LO75121 409 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 FSBPO95073 299 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 KCNA6P17658 529 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 AMOTL1Q8IY63 956 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 CEP120Q8N960 986 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 DBF4Q9UBU7 674 aaPredicted RBP9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 NDUFB9Q9Y6M9 179 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 GLI3P10071 1580 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 KIF1AQ12756 1690 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 ABL1P00519 1130 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 ARHGAP25P42331 645 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 NEDD9Q14511 834 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 CPLX2Q6PUV4 134 aaKnown RBP9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 APTXQ7Z2E3 356 aaKnown RBP9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 TRMT44Q8IYL2 757 aaKnown RBP9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 GIMAP7Q8NHV1 300 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 MED15Q96RN5 788 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 SAMSN1Q9NSI8 373 aaKnown RBP9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 KCNH3Q9ULD8 1083 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 AMOTL2Q9Y2J4 779 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 CAPN7Q9Y6W3 813 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 PBX1P40424 430 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 NT5DC1Q5TFE4 455 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 HAUS7Q99871 368 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 EHD4Q9H223 541 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 DDX60Q8IY21 1712 aaKnown RBP9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 TEX33O43247 280 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 ACRBPQ8NEB7 543 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 LINS1Q8NG48 757 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 KLHDC4Q8TBB5 520 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 FAM212AQ96EL1 285 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 CCDC51Q96ER9 411 aa9.09□□□□□ -0.95
HMGXB4-202ENST00000418170 A0A0G2JLW4 131 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 FOXN1O15353 648 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 TRAPPC11Q7Z392 1133 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 MAP3K14Q99558 947 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 SH3GL2Q99962 352 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 MCM8Q9UJA3 840 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 MAP3K15Q6ZN16 1313 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 GOLGA6BA6NDN3 693 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 CHUKO15111 745 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 C4AP0C0L4 1744 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 C4BP0C0L5 1744 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 ELF1P32519 619 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 MORC3Q14149 939 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 B4GALNT4Q76KP1 1039 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 CNGA4Q8IV77 575 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 KBTBD3Q8NAB2 608 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 CPLX3Q8WVH0 158 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 SELENOOQ9BVL4 669 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 PALLDQ8WX93 1383 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 MYO1FO00160 1098 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 SARSP49591 514 aaKnown RBP9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 GNGT1P63211 74 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 SF3B2Q13435 895 aaKnown RBP9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 POSTNQ15063 836 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 TNNI3KQ59H18 835 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 DDX46Q7L014 1031 aaKnown RBP9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 TRIML1Q8N9V2 468 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 ZKSCAN4Q969J2 545 aaPredicted RBP9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 HELLSQ9NRZ9 838 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 WWC3Q9ULE0 1092 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 HPS5Q9UPZ3 1129 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 FPGT-TNNI3KV9GXZ4 949 aa9.08□□□□□ -0.96
HMGXB4-202ENST00000418170 SPATS2Q86XZ4 545 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 TMTC1Q8IUR5 882 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 MIEF2Q96C03 454 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 GPHNQ9NQX3 736 aaPredicted RBP9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 OVOS2A0A0G2JMS6 1433 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 H0YHG0 523 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 SCP2P22307 547 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 ERCC5P28715 1186 aaPredicted RBP9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 PREPLQ4J6C6 727 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms