RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 SLURP2P0DP57 97 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 ADORA1P30542 326 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 TIMM10P62072 90 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 GSTO1P78417 241 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 RASGRF1Q13972 1273 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 ALDH1L2Q3SY69 923 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 ERICH6Q7L0X2 663 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 CCDC84Q86UT8 332 aaPredicted RBP9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 DEFB123Q8N688 67 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 DIS3LQ8TF46 1054 aaKnown RBP9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 ASCC2Q9H1I8 757 aaPredicted RBP9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 COPRSQ9NQ92 184 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 GJD2Q9UKL4 321 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 ZMYND8Q9ULU4 1186 aaPredicted RBP9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 AKAP2Q9Y2D5 859 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 MROH7-TTC4A0A0A0MT08 1334 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 USP17L5A8MUK1 530 aa9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 CAP2P40123 477 aa9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 HMGCS2P54868 508 aa9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 RHBDL3P58872 404 aa9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 MECOMQ03112 1051 aa9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 MVPQ14764 893 aaKnown RBP9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 LRIT3Q3SXY7 679 aa9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 C11orf49Q9H6J7 331 aa9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 AS3MTQ9HBK9 375 aa9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 SMC4Q9NTJ3 1288 aa9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 OGDHLQ9ULD0 1010 aa9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 PA2G4Q9UQ80 394 aaKnown RBP9.73□□□□□ -0.85
HLA-DPA1-241ENST00000417724 A0A1B0GUL7 405 aa9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 FAM196BA6NMK8 535 aa9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 MAGEA10P43363 369 aaPredicted RBP9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 IRX3P78415 501 aaPredicted RBP9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 SH3D19Q5HYK7 790 aa9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 TRMT44Q8IYL2 757 aaKnown RBP9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 TDHQ8IZJ6 230 aa9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 XAGE2Q96GT9 111 aa9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 UBE2OQ9C0C9 1292 aaKnown RBP9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 MORF4L1Q9UBU8 362 aa9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 HERC5Q9UII4 1024 aaKnown RBP9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 STXBP5LQ9Y2K9 1186 aa9.72□□□□□ -0.85
HLA-DPA1-241ENST00000417724 LOC285556D6RIA3 1793 aa9.71□□□□□ -0.85
HLA-DPA1-241ENST00000417724 ATAD5Q96QE3 1844 aa9.71□□□□□ -0.85
HLA-DPA1-241ENST00000417724 XRCC5P13010 732 aaKnown RBP9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 SYN1P17600 705 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 CYP2B6P20813 491 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 SLFN5Q08AF3 891 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 TRIM32Q13049 653 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 GORABQ5T7V8 394 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 CCAR1Q8IX12 1150 aaKnown RBP9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 GPRC5AQ8NFJ5 357 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 NEUROD6Q96NK8 337 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 NUDT12Q9BQG2 462 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 NOL10Q9BSC4 688 aaKnown RBP9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 WDR18Q9BV38 432 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 MTMR10Q9NXD2 777 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 TMOD4Q9NZQ9 345 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 RAI14Q9P0K7 980 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 PI4KBQ9UBF8 816 aa9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 COL2A1P02458 1487 aaPredicted RBP9.71□□□□□ -0.86
HLA-DPA1-241ENST00000417724 DDX60LQ5H9U9 1706 aaKnown RBP9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 C19orf81C9J6K1 198 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 ASNSP08243 561 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 PRKAR2AP13861 404 aaKnown RBP9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 MAPK4P31152 587 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 HOXA7P31268 230 aaPredicted RBP9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 BACE1P56817 501 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 TFCP2Q12800 502 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 PDE3AQ14432 1141 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 MAP3K21Q5TCX8 1036 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 Q7L0L9 218 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 TEX11Q8IYF3 940 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 SPATA5Q8NB90 893 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 ZNF384Q8TF68 577 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 SOCS4Q8WXH5 440 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 TRIB2Q92519 343 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 NSUN4Q96CB9 384 aaKnown RBP9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 P2RX7Q99572 595 aaKnown RBP9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 API5Q9BZZ5 524 aaKnown RBP9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 DHX36Q9H2U1 1008 aaKnown RBP9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 HMG20BQ9P0W2 317 aa9.7□□□□□ -0.86
HLA-DPA1-241ENST00000417724 PLXNB2O15031 1838 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 SRGAP3O43295 1099 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 BAG3O95817 575 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 GNAI3P08754 354 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 PLCG2P16885 1265 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 HERVK_113P62684 666 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 MTMR2Q13614 643 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 RRP1BQ14684 758 aaKnown RBP9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 TBC1D9Q6ZT07 1266 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 FOXP4Q8IVH2 680 aaPredicted RBP9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 TRIM34Q9BYJ4 488 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 GINM1Q9NU53 330 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 LRP2BPQ9P2M1 347 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 NOB1Q9ULX3 412 aaKnown RBP9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 COL6A3P12111 3177 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 A0A0C4DFX4 3053 aa9.69□□□□□ -0.86
HLA-DPA1-241ENST00000417724 PFASO15067 1338 aa9.68□□□□□ -0.86
HLA-DPA1-241ENST00000417724 USP17L10C9JJH3 530 aa9.68□□□□□ -0.86
HLA-DPA1-241ENST00000417724 CT47B1P0C2W7 299 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms