RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 FBXL16Q8N461 479 aa23.58■■□□□ 1.37
RUFY3-203ENST00000417478 NCOA7Q8NI08 942 aa23.58■■□□□ 1.37
RUFY3-203ENST00000417478 BRF1Q92994 677 aa23.58■■□□□ 1.37
RUFY3-203ENST00000417478 ANAPC4Q9UJX5 808 aa23.58■■□□□ 1.37
RUFY3-203ENST00000417478 GJA3Q9Y6H8 435 aa23.58■■□□□ 1.37
RUFY3-203ENST00000417478 DDX49Q9Y6V7 483 aaKnown RBP23.58■■□□□ 1.37
RUFY3-203ENST00000417478 B4E1Z4 1266 aa23.57■■□□□ 1.36
RUFY3-203ENST00000417478 NFIAQ12857 509 aa23.57■■□□□ 1.36
RUFY3-203ENST00000417478 OGFOD1Q8N543 542 aa23.57■■□□□ 1.36
RUFY3-203ENST00000417478 ARPP21Q9UBL0 812 aaPredicted RBP23.57■■□□□ 1.36
RUFY3-203ENST00000417478 PDCP20941 246 aa23.57■■□□□ 1.36
RUFY3-203ENST00000417478 SBK1Q52WX2 424 aa23.57■■□□□ 1.36
RUFY3-203ENST00000417478 MFSD6Q6ZSS7 791 aa23.57■■□□□ 1.36
RUFY3-203ENST00000417478 RALYLQ86SE5 291 aaKnown RBP23.57■■□□□ 1.36
RUFY3-203ENST00000417478 STAG1Q8WVM7 1258 aa23.57■■□□□ 1.36
RUFY3-203ENST00000417478 TDRD3Q9H7E2 651 aaKnown RBP23.56■■□□□ 1.36
RUFY3-203ENST00000417478 HDAC9Q9UKV0 1011 aa23.56■■□□□ 1.36
RUFY3-203ENST00000417478 ATP6V1DQ9Y5K8 247 aa23.56■■□□□ 1.36
RUFY3-203ENST00000417478 PRPF40AO75400 957 aaKnown RBP23.56■■□□□ 1.36
RUFY3-203ENST00000417478 PLCD1P51178 756 aa23.56■■□□□ 1.36
RUFY3-203ENST00000417478 ANTXR2P58335 489 aa23.56■■□□□ 1.36
RUFY3-203ENST00000417478 TRDNQ13061 729 aa23.56■■□□□ 1.36
RUFY3-203ENST00000417478 RRP12Q5JTH9 1297 aaKnown RBP23.56■■□□□ 1.36
RUFY3-203ENST00000417478 C12orf60Q5U649 245 aa23.56■■□□□ 1.36
RUFY3-203ENST00000417478 CYB5R4Q7L1T6 521 aa23.56■■□□□ 1.36
RUFY3-203ENST00000417478 TOMM22Q9NS69 142 aa23.56■■□□□ 1.36
RUFY3-203ENST00000417478 PRDM1O75626 825 aa23.55■■□□□ 1.36
RUFY3-203ENST00000417478 F13A1P00488 732 aa23.55■■□□□ 1.36
RUFY3-203ENST00000417478 GMPSP49915 693 aaPredicted RBP23.55■■□□□ 1.36
RUFY3-203ENST00000417478 STK3Q13188 491 aa23.55■■□□□ 1.36
RUFY3-203ENST00000417478 GPHNQ9NQX3 736 aaPredicted RBP23.55■■□□□ 1.36
RUFY3-203ENST00000417478 PFKFB2O60825 505 aa23.54■■□□□ 1.36
RUFY3-203ENST00000417478 GPR162Q16538 588 aa23.54■■□□□ 1.36
RUFY3-203ENST00000417478 MTMR6Q9Y217 621 aa23.54■■□□□ 1.36
RUFY3-203ENST00000417478 WDR19Q8NEZ3 1342 aa23.54■■□□□ 1.36
RUFY3-203ENST00000417478 SPDYE2BA6NHP3 402 aa23.54■■□□□ 1.36
RUFY3-203ENST00000417478 PRC1O43663 620 aa23.54■■□□□ 1.36
RUFY3-203ENST00000417478 KDM4AO75164 1064 aa23.54■■□□□ 1.36
RUFY3-203ENST00000417478 POLR3DP05423 398 aaPredicted RBP23.54■■□□□ 1.36
RUFY3-203ENST00000417478 SPDYE6P0CI01 402 aa23.54■■□□□ 1.36
RUFY3-203ENST00000417478 ZFPM1Q8IX07 1006 aa23.54■■□□□ 1.36
RUFY3-203ENST00000417478 DYNLL2Q96FJ2 89 aa23.54■■□□□ 1.36
RUFY3-203ENST00000417478 RNF181Q9P0P0 153 aa23.54■■□□□ 1.36
RUFY3-203ENST00000417478 MCM5P33992 734 aa23.53■■□□□ 1.36
RUFY3-203ENST00000417478 DLGAP5Q15398 846 aa23.53■■□□□ 1.36
RUFY3-203ENST00000417478 CHMP4CQ96CF2 233 aa23.53■■□□□ 1.36
RUFY3-203ENST00000417478 LARP1BQ659C4 914 aaKnown RBP23.53■■□□□ 1.36
RUFY3-203ENST00000417478 LLPHQ9BRT6 129 aaKnown RBP23.53■■□□□ 1.36
RUFY3-203ENST00000417478 RNF41Q9H4P4 317 aaPredicted RBP23.53■■□□□ 1.36
RUFY3-203ENST00000417478 ZSWIM5Q9P217 1185 aa23.53■■□□□ 1.36
RUFY3-203ENST00000417478 EGFRP00533 1210 aa23.52■■□□□ 1.36
RUFY3-203ENST00000417478 TCP10Q12799 353 aa23.52■■□□□ 1.36
RUFY3-203ENST00000417478 ZNF274Q96GC6 653 aaPredicted RBP23.52■■□□□ 1.36
RUFY3-203ENST00000417478 CHAMP1Q96JM3 812 aa23.52■■□□□ 1.36
RUFY3-203ENST00000417478 CNNM2Q9H8M5 875 aa23.52■■□□□ 1.36
RUFY3-203ENST00000417478 ISY1Q9ULR0 285 aaKnown RBP23.52■■□□□ 1.36
RUFY3-203ENST00000417478 L1TD1Q5T7N2 865 aaKnown RBP23.51■■□□□ 1.35
RUFY3-203ENST00000417478 KRT23Q9C075 422 aa23.51■■□□□ 1.35
RUFY3-203ENST00000417478 FAM198AQ9UFP1 575 aa23.51■■□□□ 1.35
RUFY3-203ENST00000417478 CLRN2A0PK11 232 aa23.51■■□□□ 1.35
RUFY3-203ENST00000417478 RPS12P25398 132 aaKnown RBP23.51■■□□□ 1.35
RUFY3-203ENST00000417478 EVCP57679 992 aa23.51■■□□□ 1.35
RUFY3-203ENST00000417478 APOBRQ0VD83 1088 aa23.51■■□□□ 1.35
RUFY3-203ENST00000417478 AMOTL1Q8IY63 956 aa23.51■■□□□ 1.35
RUFY3-203ENST00000417478 SLC44A5Q8NCS7 719 aa23.51■■□□□ 1.35
RUFY3-203ENST00000417478 OSBPL5Q9H0X9 879 aaPredicted RBP23.51■■□□□ 1.35
RUFY3-203ENST00000417478 MYOZ2Q9NPC6 264 aa23.51■■□□□ 1.35
RUFY3-203ENST00000417478 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.51■■□□□ 1.35
RUFY3-203ENST00000417478 FSD2A1L4K1 749 aa23.5■■□□□ 1.35
RUFY3-203ENST00000417478 FGRP09769 529 aa23.5■■□□□ 1.35
RUFY3-203ENST00000417478 SCRN1Q12765 414 aa23.5■■□□□ 1.35
RUFY3-203ENST00000417478 C9orf131Q5VYM1 1079 aa23.5■■□□□ 1.35
RUFY3-203ENST00000417478 MICALL2Q8IY33 904 aa23.5■■□□□ 1.35
RUFY3-203ENST00000417478 IDI2Q9BXS1 227 aa23.5■■□□□ 1.35
RUFY3-203ENST00000417478 GOLGA6L3A6NEY3 463 aa23.5■■□□□ 1.35
RUFY3-203ENST00000417478 MBD3O95983 291 aa23.5■■□□□ 1.35
RUFY3-203ENST00000417478 NBPF9Q3BBW0 867 aa23.5■■□□□ 1.35
RUFY3-203ENST00000417478 RBM26Q5T8P6 1007 aaKnown RBP23.5■■□□□ 1.35
RUFY3-203ENST00000417478 CNOT7Q9UIV1 285 aaKnown RBP23.5■■□□□ 1.35
RUFY3-203ENST00000417478 VPS37CA5D8V6 355 aaPredicted RBP23.49■■□□□ 1.35
RUFY3-203ENST00000417478 SLC3A2P08195 630 aaKnown RBP23.49■■□□□ 1.35
RUFY3-203ENST00000417478 ZNF280AP59817 542 aaPredicted RBP23.49■■□□□ 1.35
RUFY3-203ENST00000417478 TMEM87AQ8NBN3 555 aa23.49■■□□□ 1.35
RUFY3-203ENST00000417478 ZKSCAN3Q9BRR0 538 aa23.49■■□□□ 1.35
RUFY3-203ENST00000417478 ROBO3Q96MS0 1386 aa23.49■■□□□ 1.35
RUFY3-203ENST00000417478 RANBP6O60518 1105 aaKnown RBP23.48■■□□□ 1.35
RUFY3-203ENST00000417478 SAMD7Q7Z3H4 446 aa23.48■■□□□ 1.35
RUFY3-203ENST00000417478 MTMR14Q8NCE2 650 aa23.48■■□□□ 1.35
RUFY3-203ENST00000417478 SMARCC2Q8TAQ2 1214 aa23.48■■□□□ 1.35
RUFY3-203ENST00000417478 DPF2Q92785 391 aa23.48■■□□□ 1.35
RUFY3-203ENST00000417478 ZBED3Q96IU2 234 aaPredicted RBP23.48■■□□□ 1.35
RUFY3-203ENST00000417478 ZNF70Q9UC06 446 aaPredicted RBP23.48■■□□□ 1.35
RUFY3-203ENST00000417478 WNT10BO00744 389 aa23.48■■□□□ 1.35
RUFY3-203ENST00000417478 SENP2Q9HC62 589 aa23.48■■□□□ 1.35
RUFY3-203ENST00000417478 MYH8P13535 1937 aa23.47■■□□□ 1.35
RUFY3-203ENST00000417478 SIPA1L1O43166 1804 aa23.47■■□□□ 1.35
RUFY3-203ENST00000417478 SLURP2P0DP57 97 aa23.47■■□□□ 1.35
RUFY3-203ENST00000417478 PDIA3P30101 505 aaKnown RBP23.47■■□□□ 1.35
RUFY3-203ENST00000417478 PDE4BQ07343 736 aa23.47■■□□□ 1.35
RUFY3-203ENST00000417478 GPT2Q8TD30 523 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms