RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 PDILTQ8N807 584 aa14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 NKX2-3Q8TAU0 364 aa14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 PHKBQ93100 1093 aa14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 SEC31BQ9NQW1 1179 aa14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 ATP8B1O43520 1251 aa14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 CRKLP46109 303 aaKnown RBP14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 GNG11P61952 73 aa14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 PTPN21Q16825 1174 aa14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 LONRF3Q496Y0 759 aa14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 TMEM139Q8IV31 216 aa14.68□□□□□ -0.06
LRRTM1-205ENST00000417012 IARSP41252 1262 aaKnown RBP14.67□□□□□ -0.06
LRRTM1-205ENST00000417012 ERVV-1B6SEH8 477 aa14.67□□□□□ -0.06
LRRTM1-205ENST00000417012 ZBTB43O43298 467 aa14.67□□□□□ -0.06
LRRTM1-205ENST00000417012 APPP05067 770 aa14.67□□□□□ -0.06
LRRTM1-205ENST00000417012 NFXL1Q6ZNB6 911 aa14.67□□□□□ -0.06
LRRTM1-205ENST00000417012 CYB5R4Q7L1T6 521 aa14.67□□□□□ -0.06
LRRTM1-205ENST00000417012 TBC1D10CQ8IV04 446 aa14.67□□□□□ -0.06
LRRTM1-205ENST00000417012 KRI1Q8N9T8 703 aaKnown RBP14.67□□□□□ -0.06
LRRTM1-205ENST00000417012 MARCH10Q8NA82 808 aaPredicted RBP14.67□□□□□ -0.06
LRRTM1-205ENST00000417012 INTS13Q9NVM9 706 aa14.67□□□□□ -0.06
LRRTM1-205ENST00000417012 STX10O60499 249 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 CDK11BP21127 795 aaKnown RBP14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 EIF5P55010 431 aaKnown RBP14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 NBPF3Q9H094 633 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 DACH1Q9UI36 760 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 GOLGA8AA7E2F4 631 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 SEC31AO94979 1220 aaKnown RBP14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 CDC27P30260 824 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 ADD2P35612 726 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 ITPK1Q13572 414 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 HSP90AA4PQ58FG1 418 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 SPECC1LQ69YQ0 1117 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 GPR161Q8N6U8 529 aaKnown RBP14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 TMEM87BQ96K49 555 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 WWC3Q9ULE0 1092 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 SPATA31A1Q5TZJ5 1347 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 POLR3GO15318 223 aaPredicted RBP14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 PPP2R3AQ06190 1150 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 PDE4BQ07343 736 aa14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 FOXP4Q8IVH2 680 aaPredicted RBP14.66□□□□□ -0.06
LRRTM1-205ENST00000417012 PLCH1Q4KWH8 1693 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 B4E1Z4 1266 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 KCNQ2O43526 872 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 KCNQ4P56696 695 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 TBX2Q13207 712 aaPredicted RBP14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 CCDC87Q9NVE4 849 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 MYH14Q7Z406 1995 aaKnown RBP14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 ZNF532Q9HCE3 1301 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 LOC102724428A0A0B4J2F2 783 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 SIK1P57059 783 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 MAP3K9P80192 1104 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 ELOA2Q8IYF1 753 aaPredicted RBP14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 WDR24Q96S15 920 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 NFE2L3Q9Y4A8 694 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 MRFAP1Q9Y605 127 aa14.65□□□□□ -0.06
LRRTM1-205ENST00000417012 WNK3Q9BYP7 1800 aa14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 BMP6P22004 513 aa14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 POSTNQ15063 836 aa14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 CC2D1AQ6P1N0 951 aaPredicted RBP14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 MLKLQ8NB16 471 aa14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 INCENPQ9NQS7 918 aa14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 MAN1B1Q9UKM7 699 aa14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 PUM3Q15397 648 aaKnown RBP14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 SAFBQ15424 915 aaKnown RBP eCLIP14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 SMIM5Q71RC9 77 aa14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 TC2NQ8N9U0 490 aa14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 SLC26A6Q9BXS9 759 aa14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 ARFGAP3Q9NP61 516 aa14.64□□□□□ -0.07
LRRTM1-205ENST00000417012 FOXN1O15353 648 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 RANBP6O60518 1105 aaKnown RBP14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 ADKP55263 362 aaKnown RBP14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 SSRP1Q08945 709 aaKnown RBP14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 TTF1Q15361 905 aaPredicted RBP14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 TMEM67Q5HYA8 995 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 TOGARAM2Q6ZUX3 1019 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 NOSTRINQ8IVI9 506 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 IPO4Q8TEX9 1081 aaKnown RBP14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 SMARCE1Q969G3 411 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 SENP2Q9HC62 589 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 STK36Q9NRP7 1315 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 ATRNO75882 1429 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 ECM29Q5VYK3 1845 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 TBC1D8O95759 1140 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 PDE6AP16499 860 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 NTRK3Q16288 839 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 SPECC1Q5M775 1068 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 ENOX1Q8TC92 643 aaKnown RBP14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 WASF1Q92558 559 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 MYL10Q9BUA6 226 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 EPC1Q9H2F5 836 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 ZNF18P17022 549 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 MDM2Q00987 491 aaPredicted RBP14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 LPIN2Q92539 896 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 RABGGTAQ92696 567 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 GOLGA1Q92805 767 aa14.63□□□□□ -0.07
LRRTM1-205ENST00000417012 NIP7Q9Y221 180 aaKnown RBP eCLIP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms