RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 FAM110CQ1W6H9 321 aa16.39■□□□□ 0.21
LINC01398-201ENST00000416581 TTC39AQ5SRH9 613 aa16.39■□□□□ 0.21
LINC01398-201ENST00000416581 FTSJ3Q8IY81 847 aaKnown RBP16.39■□□□□ 0.21
LINC01398-201ENST00000416581 TEX11Q8IYF3 940 aa16.39■□□□□ 0.21
LINC01398-201ENST00000416581 ZNF280CQ8ND82 737 aa16.39■□□□□ 0.21
LINC01398-201ENST00000416581 COA7Q96BR5 231 aa16.39■□□□□ 0.21
LINC01398-201ENST00000416581 PI4KBQ9UBF8 816 aa16.39■□□□□ 0.21
LINC01398-201ENST00000416581 CCL5P13501 91 aa16.38■□□□□ 0.21
LINC01398-201ENST00000416581 NAA16Q6N069 864 aaPredicted RBP16.38■□□□□ 0.21
LINC01398-201ENST00000416581 TRIM34Q9BYJ4 488 aa16.38■□□□□ 0.21
LINC01398-201ENST00000416581 RNF208Q9H0X6 261 aa16.38■□□□□ 0.21
LINC01398-201ENST00000416581 PNMA6EA0A0J9YXQ4 647 aa16.37■□□□□ 0.21
LINC01398-201ENST00000416581 USP17L5A8MUK1 530 aa16.37■□□□□ 0.21
LINC01398-201ENST00000416581 ADCY3O60266 1144 aa16.37■□□□□ 0.21
LINC01398-201ENST00000416581 MYCP01106 439 aaPredicted RBP16.37■□□□□ 0.21
LINC01398-201ENST00000416581 ASNSP08243 561 aa16.37■□□□□ 0.21
LINC01398-201ENST00000416581 CTGFP29279 349 aa16.37■□□□□ 0.21
LINC01398-201ENST00000416581 CAP2P40123 477 aa16.37■□□□□ 0.21
LINC01398-201ENST00000416581 MCAMP43121 646 aa16.37■□□□□ 0.21
LINC01398-201ENST00000416581 TNNI3KQ59H18 835 aa16.37■□□□□ 0.21
LINC01398-201ENST00000416581 SSH3Q8TE77 659 aa16.37■□□□□ 0.21
LINC01398-201ENST00000416581 FPGT-TNNI3KV9GXZ4 949 aa16.37■□□□□ 0.21
LINC01398-201ENST00000416581 FOCADQ5VW36 1801 aa16.36■□□□□ 0.21
LINC01398-201ENST00000416581 FLT3LGP49771 235 aa16.36■□□□□ 0.21
LINC01398-201ENST00000416581 PPP4CP60510 307 aa16.36■□□□□ 0.21
LINC01398-201ENST00000416581 POLA2Q14181 598 aa16.36■□□□□ 0.21
LINC01398-201ENST00000416581 MTFR1Q15390 333 aa16.36■□□□□ 0.21
LINC01398-201ENST00000416581 FOXP4Q8IVH2 680 aaPredicted RBP16.36■□□□□ 0.21
LINC01398-201ENST00000416581 CLUAP1Q96AJ1 413 aa16.36■□□□□ 0.21
LINC01398-201ENST00000416581 NR2E3Q9Y5X4 410 aa16.36■□□□□ 0.21
LINC01398-201ENST00000416581 BCAR3O75815 825 aa16.35■□□□□ 0.21
LINC01398-201ENST00000416581 HLA-DOAP06340 250 aa16.35■□□□□ 0.21
LINC01398-201ENST00000416581 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
LINC01398-201ENST00000416581 SPP2Q13103 211 aa16.35■□□□□ 0.21
LINC01398-201ENST00000416581 SH3D19Q5HYK7 790 aa16.35■□□□□ 0.21
LINC01398-201ENST00000416581 TBC1D9Q6ZT07 1266 aa16.35■□□□□ 0.21
LINC01398-201ENST00000416581 TMEM57Q8N5G2 664 aa16.35■□□□□ 0.21
LINC01398-201ENST00000416581 ZNF384Q8TF68 577 aa16.35■□□□□ 0.21
LINC01398-201ENST00000416581 GTF3C2Q8WUA4 911 aaPredicted RBP16.35■□□□□ 0.21
LINC01398-201ENST00000416581 SHISA4Q96DD7 197 aa16.35■□□□□ 0.21
LINC01398-201ENST00000416581 TMOD4Q9NZQ9 345 aa16.35■□□□□ 0.21
LINC01398-201ENST00000416581 C19orf81C9J6K1 198 aa16.34■□□□□ 0.21
LINC01398-201ENST00000416581 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
LINC01398-201ENST00000416581 PI16Q6UXB8 463 aa16.34■□□□□ 0.21
LINC01398-201ENST00000416581 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
LINC01398-201ENST00000416581 CRACR2BQ8N4Y2 399 aaPredicted RBP16.34■□□□□ 0.21
LINC01398-201ENST00000416581 U2AF1L4Q8WU68 220 aaKnown RBP16.34■□□□□ 0.21
LINC01398-201ENST00000416581 DPF3Q92784 378 aa16.34■□□□□ 0.21
LINC01398-201ENST00000416581 WDR18Q9BV38 432 aa16.34■□□□□ 0.21
LINC01398-201ENST00000416581 NOP58Q9Y2X3 529 aaKnown RBP16.34■□□□□ 0.21
LINC01398-201ENST00000416581 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.2
LINC01398-201ENST00000416581 FARP2O94887 1054 aaPredicted RBP16.33■□□□□ 0.2
LINC01398-201ENST00000416581 SGPL1O95470 568 aa16.33■□□□□ 0.2
LINC01398-201ENST00000416581 IRX3P78415 501 aaPredicted RBP16.33■□□□□ 0.2
LINC01398-201ENST00000416581 ANKRD13CQ8N6S4 541 aa16.33■□□□□ 0.2
LINC01398-201ENST00000416581 AATFQ9NY61 560 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC01398-201ENST00000416581 INHAP05111 366 aa16.32■□□□□ 0.2
LINC01398-201ENST00000416581 MS4A1P11836 297 aa16.32■□□□□ 0.2
LINC01398-201ENST00000416581 HMGCS2P54868 508 aa16.32■□□□□ 0.2
LINC01398-201ENST00000416581 HSP90AB4PQ58FF6 505 aa16.32■□□□□ 0.2
LINC01398-201ENST00000416581 UBE2Q1Q7Z7E8 422 aa16.32■□□□□ 0.2
LINC01398-201ENST00000416581 METTL16Q86W50 562 aaKnown RBP16.32■□□□□ 0.2
LINC01398-201ENST00000416581 ITPRIPQ8IWB1 547 aa16.32■□□□□ 0.2
LINC01398-201ENST00000416581 SH3RF3Q8TEJ3 882 aaPredicted RBP16.32■□□□□ 0.2
LINC01398-201ENST00000416581 CDK5RAP2Q96SN8 1893 aa16.32■□□□□ 0.2
LINC01398-201ENST00000416581 DBNDD2Q9BQY9 259 aa16.32■□□□□ 0.2
LINC01398-201ENST00000416581 GABRQQ9UN88 632 aa16.32■□□□□ 0.2
LINC01398-201ENST00000416581 FLT1P17948 1338 aa16.31■□□□□ 0.2
LINC01398-201ENST00000416581 H0YGN5 161 aa16.31■□□□□ 0.2
LINC01398-201ENST00000416581 HMGCRP04035 888 aa16.31■□□□□ 0.2
LINC01398-201ENST00000416581 BACE1P56817 501 aa16.31■□□□□ 0.2
LINC01398-201ENST00000416581 TREML2Q5T2D2 321 aa16.31■□□□□ 0.2
LINC01398-201ENST00000416581 ANKLE1Q8NAG6 615 aa16.31■□□□□ 0.2
LINC01398-201ENST00000416581 SOCS4Q8WXH5 440 aa16.31■□□□□ 0.2
LINC01398-201ENST00000416581 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
LINC01398-201ENST00000416581 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.31■□□□□ 0.2
LINC01398-201ENST00000416581 CENPFP49454 3210 aa16.3■□□□□ 0.2
LINC01398-201ENST00000416581 FAM196BA6NMK8 535 aa16.3■□□□□ 0.2
LINC01398-201ENST00000416581 HOXA7P31268 230 aaPredicted RBP16.3■□□□□ 0.2
LINC01398-201ENST00000416581 FXR1P51114 621 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC01398-201ENST00000416581 TRMT44Q8IYL2 757 aaKnown RBP16.3■□□□□ 0.2
LINC01398-201ENST00000416581 TGFBRAP1Q8WUH2 860 aa16.3■□□□□ 0.2
LINC01398-201ENST00000416581 UNC93B1Q9H1C4 597 aa16.3■□□□□ 0.2
LINC01398-201ENST00000416581 ASCC2Q9H1I8 757 aaPredicted RBP16.3■□□□□ 0.2
LINC01398-201ENST00000416581 PAK6Q9NQU5 681 aaPredicted RBP16.3■□□□□ 0.2
LINC01398-201ENST00000416581 COLQQ9Y215 455 aaPredicted RBP16.3■□□□□ 0.2
LINC01398-201ENST00000416581 SIPA1L1O43166 1804 aa16.3■□□□□ 0.2
LINC01398-201ENST00000416581 A0A1W2PPC1 479 aa16.29■□□□□ 0.2
LINC01398-201ENST00000416581 USP17L10C9JJH3 530 aa16.29■□□□□ 0.2
LINC01398-201ENST00000416581 CYP2E1P05181 493 aaPredicted RBP16.29■□□□□ 0.2
LINC01398-201ENST00000416581 HNRNPUQ00839 825 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC01398-201ENST00000416581 MAP3K12Q12852 859 aa16.29■□□□□ 0.2
LINC01398-201ENST00000416581 MAPKAPK5Q8IW41 473 aa16.29■□□□□ 0.2
LINC01398-201ENST00000416581 SNRKQ9NRH2 765 aa16.29■□□□□ 0.2
LINC01398-201ENST00000416581 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
LINC01398-201ENST00000416581 CEP290O15078 2479 aa16.29■□□□□ 0.2
LINC01398-201ENST00000416581 TFRCP02786 760 aaKnown RBP16.28■□□□□ 0.2
LINC01398-201ENST00000416581 ELNP15502 786 aa16.28■□□□□ 0.2
LINC01398-201ENST00000416581 MTMR2Q13614 643 aa16.28■□□□□ 0.2
LINC01398-201ENST00000416581 PDE3AQ14432 1141 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms