RNA–Protein interactions for RNA: ENST00000416426.6

MSI2-203, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-203ENST00000416426 DDX19AQ9NUU7 478 aaKnown RBP21.24■□□□□ 0.99
MSI2-203ENST00000416426 LDHCP07864 332 aa21.23■□□□□ 0.99
MSI2-203ENST00000416426 NT5C2P49902 561 aa21.23■□□□□ 0.99
MSI2-203ENST00000416426 PPP2R5BQ15173 497 aa21.23■□□□□ 0.99
MSI2-203ENST00000416426 GRIK5Q16478 980 aa21.23■□□□□ 0.99
MSI2-203ENST00000416426 PHKBQ93100 1093 aa21.23■□□□□ 0.99
MSI2-203ENST00000416426 ZSCAN10Q96SZ4 725 aaPredicted RBP21.23■□□□□ 0.99
MSI2-203ENST00000416426 ATP6V0A2Q9Y487 856 aa21.23■□□□□ 0.99
MSI2-203ENST00000416426 CCDC196A0A1B0GTZ2 297 aa21.22■□□□□ 0.99
MSI2-203ENST00000416426 SRGNP10124 158 aa21.22■□□□□ 0.99
MSI2-203ENST00000416426 SSRP1Q08945 709 aaKnown RBP21.22■□□□□ 0.99
MSI2-203ENST00000416426 CERS3Q8IU89 383 aa21.22■□□□□ 0.99
MSI2-203ENST00000416426 ANP32BQ92688 251 aaKnown RBP21.22■□□□□ 0.99
MSI2-203ENST00000416426 GJB4Q9NTQ9 266 aa21.22■□□□□ 0.99
MSI2-203ENST00000416426 COL11A2P13942 1736 aaPredicted RBP21.22■□□□□ 0.99
MSI2-203ENST00000416426 MROH7-TTC4A0A0A0MT08 1334 aa21.22■□□□□ 0.99
MSI2-203ENST00000416426 SLC3A2P08195 630 aaKnown RBP21.21■□□□□ 0.99
MSI2-203ENST00000416426 NPR1P16066 1061 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 ENAHQ8N8S7 591 aaPredicted RBP21.21■□□□□ 0.99
MSI2-203ENST00000416426 WASF1Q92558 559 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 AIFM3Q96NN9 605 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 FTOQ9C0B1 505 aaKnown RBP eCLIP21.21■□□□□ 0.991e-11■□□□□ 9.5
MSI2-203ENST00000416426 NUP62CLQ9H1M0 184 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 NAV1Q8NEY1 1877 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 FAM205AQ6ZU69 1335 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 KIF28PB7ZC32 967 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 BAG3O95817 575 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 MYSM1Q5VVJ2 828 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 KRT40Q6A162 431 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 RBM43Q6ZSC3 357 aaKnown RBP21.21■□□□□ 0.99
MSI2-203ENST00000416426 NBPF11Q86T75 865 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 FANCBQ8NB91 859 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 POLR3EQ9NVU0 708 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 DACT1Q9NYF0 836 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 CDK5RAP2Q96SN8 1893 aa21.21■□□□□ 0.99
MSI2-203ENST00000416426 ROBO3Q96MS0 1386 aa21.2■□□□□ 0.98
MSI2-203ENST00000416426 YEATS4O95619 227 aa21.2■□□□□ 0.98
MSI2-203ENST00000416426 UVSSAQ2YD98 709 aa21.2■□□□□ 0.98
MSI2-203ENST00000416426 IQCA1Q86XH1 822 aa21.2■□□□□ 0.98
MSI2-203ENST00000416426 BICD2Q8TD16 824 aa21.2■□□□□ 0.98
MSI2-203ENST00000416426 CAMKK2Q96RR4 588 aa21.2■□□□□ 0.98
MSI2-203ENST00000416426 CLSTN2Q9H4D0 955 aa21.2■□□□□ 0.98
MSI2-203ENST00000416426 CYP2D6P10635 497 aa21.19■□□□□ 0.98
MSI2-203ENST00000416426 CEBPZQ03701 1054 aaKnown RBP21.19■□□□□ 0.98
MSI2-203ENST00000416426 EVX2Q03828 476 aa21.19■□□□□ 0.98
MSI2-203ENST00000416426 C12orf60Q5U649 245 aa21.19■□□□□ 0.98
MSI2-203ENST00000416426 CRACR2BQ8N4Y2 399 aaPredicted RBP21.19■□□□□ 0.98
MSI2-203ENST00000416426 SH3RF3Q8TEJ3 882 aaPredicted RBP21.19■□□□□ 0.98
MSI2-203ENST00000416426 TBC1D22AQ8WUA7 517 aa21.19■□□□□ 0.98
MSI2-203ENST00000416426 FAM163AQ96GL9 167 aaPredicted RBP21.19■□□□□ 0.98
MSI2-203ENST00000416426 PDLIM2Q96JY6 352 aa21.19■□□□□ 0.98
MSI2-203ENST00000416426 SLC26A6Q9BXS9 759 aa21.19■□□□□ 0.98
MSI2-203ENST00000416426 RTFDC1Q9BY42 306 aaPredicted RBP21.19■□□□□ 0.98
MSI2-203ENST00000416426 PDE6BP35913 854 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 DIXDC1Q155Q3 683 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 LINC00301Q8NCQ3 95 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 PARP3Q9Y6F1 533 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 DDX60LQ5H9U9 1706 aaKnown RBP21.18■□□□□ 0.98
MSI2-203ENST00000416426 C6orf229H3BNL8 230 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 NR1I2O75469 434 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 PRDM1O75626 825 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 MMP10P09238 476 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 U2AF2P26368 475 aaKnown RBP eCLIP21.18■□□□□ 0.983e-7■□□□□ 11
MSI2-203ENST00000416426 PDE4BQ07343 736 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 MAP3K11Q16584 847 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 TRIM22Q8IYM9 498 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 NOL10Q9BSC4 688 aaKnown RBP21.18■□□□□ 0.98
MSI2-203ENST00000416426 MCM9Q9NXL9 1143 aa21.18■□□□□ 0.98
MSI2-203ENST00000416426 GPR75-ASB3A0A0A6YYF3 556 aa21.17■□□□□ 0.98
MSI2-203ENST00000416426 POLR3DP05423 398 aaPredicted RBP21.17■□□□□ 0.98
MSI2-203ENST00000416426 ALDH1B1P30837 517 aa21.17■□□□□ 0.98
MSI2-203ENST00000416426 USP5P45974 858 aa21.17■□□□□ 0.98
MSI2-203ENST00000416426 TRIM29Q14134 588 aa21.17■□□□□ 0.98
MSI2-203ENST00000416426 IFIT1BQ5T764 474 aaKnown RBP21.17■□□□□ 0.98
MSI2-203ENST00000416426 RNF214Q8ND24 703 aa21.17■□□□□ 0.98
MSI2-203ENST00000416426 A0A1W2PQ27 194 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 A0A1W2PQ64 194 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 A0A1W2PQD8 194 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 DDAH1O94760 285 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 DEXIO95424 95 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 USP17L8P0C7I0 530 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 CALM1P0DP23 149 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 CALM2P0DP24 149 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 CALM3P0DP25 149 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 CATIPQ7Z7H3 387 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 CCAR1Q8IX12 1150 aaKnown RBP21.16■□□□□ 0.98
MSI2-203ENST00000416426 KCNG4Q8TDN1 519 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 COA1Q9GZY4 146 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 CLIC4Q9Y696 253 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 GAKO14976 1311 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 QSER1Q2KHR3 1735 aa21.16■□□□□ 0.98
MSI2-203ENST00000416426 SLF2Q8IX21 1173 aa21.15■□□□□ 0.98
MSI2-203ENST00000416426 FAM43AQ8N2R8 423 aa21.15■□□□□ 0.98
MSI2-203ENST00000416426 NUP133Q8WUM0 1156 aa21.15■□□□□ 0.98
MSI2-203ENST00000416426 MASTLQ96GX5 879 aa21.15■□□□□ 0.98
MSI2-203ENST00000416426 RNF26Q9BY78 433 aaPredicted RBP21.15■□□□□ 0.98
MSI2-203ENST00000416426 TNMDQ9H2S6 317 aa21.15■□□□□ 0.98
MSI2-203ENST00000416426 RBM28Q9NW13 759 aaKnown RBP21.15■□□□□ 0.98
MSI2-203ENST00000416426 MYH6P13533 1939 aa21.15■□□□□ 0.98
MSI2-203ENST00000416426 CCDC192P0DO97 292 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms