RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 USP17L3A6NCW0 530 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 USP17L4A6NCW7 530 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 F8W031 263 aaPredicted RBP15.32■□□□□ 0.04
HNF4A-204ENST00000415691 ADD2P35612 726 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 IRX3P78415 501 aaPredicted RBP15.32■□□□□ 0.04
HNF4A-204ENST00000415691 MECOMQ03112 1051 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 DACT2Q5SW24 774 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 USP17L1Q7RTZ2 530 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 JDP2Q8WYK2 163 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 OSBP2Q969R2 916 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 TRIM34Q9BYJ4 488 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 TNMDQ9H2S6 317 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 YY1AP1Q9H869 796 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 SNX14Q9Y5W7 946 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 SALL1Q9NSC2 1324 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 MYO5AQ9Y4I1 1855 aaKnown RBP15.32■□□□□ 0.04
HNF4A-204ENST00000415691 TCRBV5S4A2TA0A5A2 114 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 TEX35Q5T0J7 233 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 STRIP1Q5VSL9 837 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 CCDC129Q6ZRS4 1044 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 ADGRA1Q86SQ6 560 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.32■□□□□ 0.04
HNF4A-204ENST00000415691 PUS7LQ9H0K6 701 aaKnown RBP15.32■□□□□ 0.04
HNF4A-204ENST00000415691 FHOD1Q9Y613 1164 aa15.32■□□□□ 0.04
HNF4A-204ENST00000415691 LDHBP07195 334 aaKnown RBP15.31■□□□□ 0.04
HNF4A-204ENST00000415691 RAD51AP2Q09MP3 1159 aa15.31■□□□□ 0.04
HNF4A-204ENST00000415691 ZMYM1Q5SVZ6 1142 aa15.31■□□□□ 0.04
HNF4A-204ENST00000415691 ZNF592Q92610 1267 aa15.31■□□□□ 0.04
HNF4A-204ENST00000415691 NSUN4Q96CB9 384 aaKnown RBP15.31■□□□□ 0.04
HNF4A-204ENST00000415691 CLSTN2Q9H4D0 955 aa15.31■□□□□ 0.04
HNF4A-204ENST00000415691 PSMD14O00487 310 aa15.31■□□□□ 0.04
HNF4A-204ENST00000415691 ATP8B1O43520 1251 aa15.31■□□□□ 0.04
HNF4A-204ENST00000415691 GJB2P29033 226 aa15.31■□□□□ 0.04
HNF4A-204ENST00000415691 CXCL9Q07325 125 aa15.31■□□□□ 0.04
HNF4A-204ENST00000415691 CCDC144BQ3MJ40 725 aa15.31■□□□□ 0.04
HNF4A-204ENST00000415691 TTC6Q86TZ1 520 aa15.31■□□□□ 0.04
HNF4A-204ENST00000415691 CCDC144CPQ8IYA2 1237 aa15.31■□□□□ 0.04
HNF4A-204ENST00000415691 ZBTB12Q9Y330 459 aaPredicted RBP15.31■□□□□ 0.04
HNF4A-204ENST00000415691 SCN9AQ15858 1988 aa15.3■□□□□ 0.04
HNF4A-204ENST00000415691 M0R2C6 588 aa15.3■□□□□ 0.04
HNF4A-204ENST00000415691 SGSM2O43147 1006 aa15.3■□□□□ 0.04
HNF4A-204ENST00000415691 CYP7A1P22680 504 aa15.3■□□□□ 0.04
HNF4A-204ENST00000415691 TPM4P67936 248 aa15.3■□□□□ 0.04
HNF4A-204ENST00000415691 DIXDC1Q155Q3 683 aa15.3■□□□□ 0.04
HNF4A-204ENST00000415691 SPTY2D1Q68D10 685 aaPredicted RBP15.3■□□□□ 0.04
HNF4A-204ENST00000415691 ZNF589Q86UQ0 364 aaPredicted RBP15.3■□□□□ 0.04
HNF4A-204ENST00000415691 TBC1D22AQ8WUA7 517 aa15.3■□□□□ 0.04
HNF4A-204ENST00000415691 SCAND2PQ9GZW5 306 aaPredicted RBP15.3■□□□□ 0.04
HNF4A-204ENST00000415691 HIP1O00291 1037 aa15.29■□□□□ 0.04
HNF4A-204ENST00000415691 LMNB1P20700 586 aa15.29■□□□□ 0.04
HNF4A-204ENST00000415691 ZNF165P49910 485 aa15.29■□□□□ 0.04
HNF4A-204ENST00000415691 VPS53Q5VIR6 699 aa15.29■□□□□ 0.04
HNF4A-204ENST00000415691 ZFYP08048 801 aaPredicted RBP15.29■□□□□ 0.04
HNF4A-204ENST00000415691 LIG1P18858 919 aa15.29■□□□□ 0.04
HNF4A-204ENST00000415691 UBE3CQ15386 1083 aa15.29■□□□□ 0.04
HNF4A-204ENST00000415691 NAA16Q6N069 864 aaPredicted RBP15.29■□□□□ 0.04
HNF4A-204ENST00000415691 KIAA0825Q8IV33 1275 aa15.29■□□□□ 0.04
HNF4A-204ENST00000415691 CCAR2Q8N163 923 aaKnown RBP15.29■□□□□ 0.04
HNF4A-204ENST00000415691 MIGA1Q8NAN2 632 aa15.29■□□□□ 0.04
HNF4A-204ENST00000415691 TM6SF1Q9BZW5 370 aa15.29■□□□□ 0.04
HNF4A-204ENST00000415691 VIL1P09327 827 aaKnown RBP15.28■□□□□ 0.04
HNF4A-204ENST00000415691 SKILP12757 684 aa15.28■□□□□ 0.04
HNF4A-204ENST00000415691 SCNN1DP51172 638 aa15.28■□□□□ 0.04
HNF4A-204ENST00000415691 MCMDC2Q4G0Z9 681 aa15.28■□□□□ 0.04
HNF4A-204ENST00000415691 CTR9Q6PD62 1173 aa15.28■□□□□ 0.04
HNF4A-204ENST00000415691 DZIP1Q86YF9 867 aaKnown RBP15.28■□□□□ 0.04
HNF4A-204ENST00000415691 APPBP2Q92624 585 aa15.28■□□□□ 0.04
HNF4A-204ENST00000415691 LSG1Q9H089 658 aaKnown RBP15.28■□□□□ 0.04
HNF4A-204ENST00000415691 ST7Q9NRC1 585 aa15.28■□□□□ 0.04
HNF4A-204ENST00000415691 MYH13Q9UKX3 1938 aa15.28■□□□□ 0.04
HNF4A-204ENST00000415691 FZD9O00144 591 aa15.28■□□□□ 0.04
HNF4A-204ENST00000415691 PNMA6AP0CW24 399 aaPredicted RBP15.28■□□□□ 0.04
HNF4A-204ENST00000415691 LRRFIP1Q32MZ4 808 aaKnown RBP15.28■□□□□ 0.04
HNF4A-204ENST00000415691 HELLSQ9NRZ9 838 aa15.28■□□□□ 0.04
HNF4A-204ENST00000415691 DACT1Q9NYF0 836 aa15.28■□□□□ 0.04
HNF4A-204ENST00000415691 TTF2Q9UNY4 1162 aaKnown RBP15.28■□□□□ 0.04
HNF4A-204ENST00000415691 MAST3O60307 1309 aa15.28■□□□□ 0.04
HNF4A-204ENST00000415691 USP27XA6NNY8 438 aa15.27■□□□□ 0.04
HNF4A-204ENST00000415691 ZRANB2O95218 330 aaKnown RBP eCLIP15.27■□□□□ 0.04
HNF4A-204ENST00000415691 PDCP20941 246 aa15.27■□□□□ 0.04
HNF4A-204ENST00000415691 KCNJ6P48051 423 aa15.27■□□□□ 0.04
HNF4A-204ENST00000415691 DYNLL1P63167 89 aaKnown RBP15.27■□□□□ 0.04
HNF4A-204ENST00000415691 CCZ1BP86790 482 aa15.27■□□□□ 0.04
HNF4A-204ENST00000415691 CCZ1P86791 482 aaPredicted RBP15.27■□□□□ 0.04
HNF4A-204ENST00000415691 RSBN1LQ6PCB5 846 aaPredicted RBP15.27■□□□□ 0.04
HNF4A-204ENST00000415691 RUFY2Q8WXA3 655 aa15.27■□□□□ 0.04
HNF4A-204ENST00000415691 RNF181Q9P0P0 153 aa15.27■□□□□ 0.04
HNF4A-204ENST00000415691 V9GYY5 206 aaPredicted RBP15.27■□□□□ 0.04
HNF4A-204ENST00000415691 RFX7Q2KHR2 1363 aa15.27■□□□□ 0.04
HNF4A-204ENST00000415691 PLA2G4AP47712 749 aa15.27■□□□□ 0.03
HNF4A-204ENST00000415691 DHX8Q14562 1220 aaKnown RBP15.27■□□□□ 0.03
HNF4A-204ENST00000415691 C9orf131Q5VYM1 1079 aa15.27■□□□□ 0.03
HNF4A-204ENST00000415691 CIAPIN1Q6FI81 312 aa15.27■□□□□ 0.03
HNF4A-204ENST00000415691 FILIP1Q7Z7B0 1213 aa15.27■□□□□ 0.03
HNF4A-204ENST00000415691 UBXN6Q9BZV1 441 aa15.27■□□□□ 0.03
HNF4A-204ENST00000415691 ARGLU1Q9NWB6 273 aaPredicted RBP15.27■□□□□ 0.03
HNF4A-204ENST00000415691 PCDHAC2Q9Y5I4 1007 aa15.27■□□□□ 0.03
HNF4A-204ENST00000415691 CLCN6P51797 869 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 GSDMDP57764 484 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms