RNA–Protein interactions for RNA: ENST00000415452.5

RUBCN-204, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 1 (best)

Gene RUBCN, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-204ENST00000415452 KRT40Q6A162 431 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 CTR9Q6PD62 1173 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 CCDC73Q6ZRK6 1079 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 C15orf52Q6ZUT6 534 aaKnown RBP13.22□□□□□ -0.29
RUBCN-204ENST00000415452 LINC00301Q8NCQ3 95 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 WDR66Q8TBY9 1149 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 AIFM3Q96NN9 605 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 ARID3AQ99856 593 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 DUOX1Q9NRD9 1551 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 KIAA1551Q9HCM1 1747 aa13.21□□□□□ -0.29
RUBCN-204ENST00000415452 KIF28PB7ZC32 967 aa13.21□□□□□ -0.29
RUBCN-204ENST00000415452 TRIM37O94972 964 aa13.21□□□□□ -0.29
RUBCN-204ENST00000415452 TYRO3Q06418 890 aa13.21□□□□□ -0.29
RUBCN-204ENST00000415452 TRIM29Q14134 588 aa13.21□□□□□ -0.29
RUBCN-204ENST00000415452 STK38Q15208 465 aa13.21□□□□□ -0.29
RUBCN-204ENST00000415452 RTN1Q16799 776 aa13.21□□□□□ -0.29
RUBCN-204ENST00000415452 ZSCAN30Q86W11 494 aa13.21□□□□□ -0.29
RUBCN-204ENST00000415452 KCNG4Q8TDN1 519 aa13.21□□□□□ -0.29
RUBCN-204ENST00000415452 ATP8A2Q9NTI2 1148 aa13.21□□□□□ -0.29
RUBCN-204ENST00000415452 AATFQ9NY61 560 aaKnown RBP eCLIP13.21□□□□□ -0.29
RUBCN-204ENST00000415452 PPP2R5BQ15173 497 aa13.21□□□□□ -0.3
RUBCN-204ENST00000415452 SEC23AQ15436 765 aa13.21□□□□□ -0.3
RUBCN-204ENST00000415452 ADALQ6DHV7 355 aa13.21□□□□□ -0.3
RUBCN-204ENST00000415452 ZNF804AQ7Z570 1209 aa13.21□□□□□ -0.3
RUBCN-204ENST00000415452 CKAP2LQ8IYA6 745 aa13.21□□□□□ -0.3
RUBCN-204ENST00000415452 TDRD7Q8NHU6 1098 aaKnown RBP13.21□□□□□ -0.3
RUBCN-204ENST00000415452 RBM17Q96I25 401 aaKnown RBP13.21□□□□□ -0.3
RUBCN-204ENST00000415452 SLC26A6Q9BXS9 759 aa13.21□□□□□ -0.3
RUBCN-204ENST00000415452 PCDHA7Q9UN72 937 aa13.21□□□□□ -0.3
RUBCN-204ENST00000415452 MYH2Q9UKX2 1941 aa13.21□□□□□ -0.3
RUBCN-204ENST00000415452 TNKSO95271 1327 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 USP17L12C9JPN9 530 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 USP17L21D6R901 530 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 CTAGE5O15320 804 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
RUBCN-204ENST00000415452 DZIP1Q86YF9 867 aaKnown RBP13.2□□□□□ -0.3
RUBCN-204ENST00000415452 TRIM22Q8IYM9 498 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 ZNF654Q8IZM8 581 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 CLIC4Q9Y696 253 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 MRVI1Q9Y6F6 885 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 CYP2D7A0A087X1C5 515 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 A0A1W2PQ27 194 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 A0A1W2PQ64 194 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 A0A1W2PQD8 194 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 FAM160A1Q05DH4 1040 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 SASS6Q6UVJ0 657 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 ZSCAN10Q96SZ4 725 aaPredicted RBP13.2□□□□□ -0.3
RUBCN-204ENST00000415452 GOLPH3LQ9H4A5 285 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 DCP1AQ9NPI6 582 aaPredicted RBP13.2□□□□□ -0.3
RUBCN-204ENST00000415452 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 LAMB1P07942 1786 aa13.2□□□□□ -0.3
RUBCN-204ENST00000415452 SMIM22K7EJ46 135 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 SPTLC2O15270 562 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 LDHBP07195 334 aaKnown RBP13.19□□□□□ -0.3
RUBCN-204ENST00000415452 SNW1Q13573 536 aaKnown RBP13.19□□□□□ -0.3
RUBCN-204ENST00000415452 SBK1Q52WX2 424 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 ANO1Q5XXA6 986 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 ENGASEQ8NFI3 743 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 FAM200AQ8TCP9 573 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 ARPP21Q9UBL0 812 aaPredicted RBP13.19□□□□□ -0.3
RUBCN-204ENST00000415452 USP25Q9UHP3 1055 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 BBOX1O75936 387 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
RUBCN-204ENST00000415452 ATP2B4P23634 1241 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 GPSM2P81274 684 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 GNL2Q13823 731 aaKnown RBP13.19□□□□□ -0.3
RUBCN-204ENST00000415452 IQCA1Q86XH1 822 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 MRPS27Q92552 414 aaKnown RBP13.19□□□□□ -0.3
RUBCN-204ENST00000415452 JAG2Q9Y219 1238 aa13.19□□□□□ -0.3
RUBCN-204ENST00000415452 ORC4O43929 436 aa13.18□□□□□ -0.3
RUBCN-204ENST00000415452 KINO60870 393 aaKnown RBP13.18□□□□□ -0.3
RUBCN-204ENST00000415452 U2AF2P26368 475 aaKnown RBP eCLIP13.18□□□□□ -0.3
RUBCN-204ENST00000415452 GSTO1P78417 241 aa13.18□□□□□ -0.3
RUBCN-204ENST00000415452 DMTNQ08495 405 aa13.18□□□□□ -0.3
RUBCN-204ENST00000415452 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
RUBCN-204ENST00000415452 TXNRD1Q16881 649 aa13.18□□□□□ -0.3
RUBCN-204ENST00000415452 CRACR2BQ8N4Y2 399 aaPredicted RBP13.18□□□□□ -0.3
RUBCN-204ENST00000415452 ENAHQ8N8S7 591 aaPredicted RBP13.18□□□□□ -0.3
RUBCN-204ENST00000415452 NUP133Q8WUM0 1156 aa13.18□□□□□ -0.3
RUBCN-204ENST00000415452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
RUBCN-204ENST00000415452 DLEC1Q9Y238 1755 aa13.18□□□□□ -0.3
RUBCN-204ENST00000415452 DEXIO95424 95 aa13.18□□□□□ -0.3
RUBCN-204ENST00000415452 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
RUBCN-204ENST00000415452 NBPF11Q86T75 865 aa13.18□□□□□ -0.3
RUBCN-204ENST00000415452 NOL7Q9UMY1 257 aaKnown RBP13.18□□□□□ -0.3
RUBCN-204ENST00000415452 POLRMTO00411 1230 aaKnown RBP13.17□□□□□ -0.3
RUBCN-204ENST00000415452 ADCY5O95622 1261 aa13.17□□□□□ -0.3
RUBCN-204ENST00000415452 CAVIN2O95810 425 aa13.17□□□□□ -0.3
RUBCN-204ENST00000415452 MSNP26038 577 aaKnown RBP13.17□□□□□ -0.3
RUBCN-204ENST00000415452 DDR1Q08345 913 aa13.17□□□□□ -0.3
RUBCN-204ENST00000415452 IFIT1BQ5T764 474 aaKnown RBP13.17□□□□□ -0.3
RUBCN-204ENST00000415452 UTP14CQ5TAP6 766 aaKnown RBP13.17□□□□□ -0.3
RUBCN-204ENST00000415452 SLC51AQ86UW1 340 aa13.17□□□□□ -0.3
RUBCN-204ENST00000415452 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.17□□□□□ -0.3
RUBCN-204ENST00000415452 PRDM1O75626 825 aa13.17□□□□□ -0.3
RUBCN-204ENST00000415452 SLC39A14Q15043 492 aa13.17□□□□□ -0.3
RUBCN-204ENST00000415452 ANO6Q4KMQ2 910 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms