RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 TAF6LQ9Y6J9 622 aa7.84□□□□□ -1.15
HDAC8-211ENST00000415409 LAMB2P55268 1798 aa7.84□□□□□ -1.15
HDAC8-211ENST00000415409 SALL1Q9NSC2 1324 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 TUBGCP6Q96RT7 1819 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 GSG1L2A8MUP6 293 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 GOLGA6L22H0YM25 854 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 FOXP2O15409 715 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 LDHBP07195 334 aaKnown RBP7.83□□□□□ -1.16
HDAC8-211ENST00000415409 LDHCP07864 332 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 PDIA4P13667 645 aaKnown RBP7.83□□□□□ -1.16
HDAC8-211ENST00000415409 IL1R1P14778 569 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 MCM5P33992 734 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 HAND2P61296 217 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 EXOSC10Q01780 885 aaKnown RBP7.83□□□□□ -1.16
HDAC8-211ENST00000415409 MECOMQ03112 1051 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 STOX1Q6ZVD7 989 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 LCORLQ8N3X6 602 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 MPNDQ8N594 471 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 NKX2-3Q8TAU0 364 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
HDAC8-211ENST00000415409 SLC16A10Q8TF71 515 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 TBC1D22AQ8WUA7 517 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 TNPO1Q92973 898 aaKnown RBP7.83□□□□□ -1.16
HDAC8-211ENST00000415409 CNKSR1Q969H4 720 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 NSUN4Q96CB9 384 aaKnown RBP7.83□□□□□ -1.16
HDAC8-211ENST00000415409 EYA3Q99504 573 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 NOL10Q9BSC4 688 aaKnown RBP7.83□□□□□ -1.16
HDAC8-211ENST00000415409 ZC3H12CQ9C0D7 883 aaKnown RBP7.83□□□□□ -1.16
HDAC8-211ENST00000415409 COA1Q9GZY4 146 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 CD209Q9NNX6 404 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 POLLQ9UGP5 575 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 TPCN1Q9ULQ1 816 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 PCDHB3Q9Y5E6 796 aa7.83□□□□□ -1.16
HDAC8-211ENST00000415409 TAF1LQ8IZX4 1826 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 WDR19Q8NEZ3 1342 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 DDX11L8A8MPP1 907 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 PRKAB2O43741 272 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 BAG3O95817 575 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 DNAJB2P25686 324 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 MCM4P33991 863 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 TOB2Q14106 344 aaPredicted RBP7.82□□□□□ -1.16
HDAC8-211ENST00000415409 ME3Q16798 604 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 GIMAP6Q6P9H5 292 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 CERS3Q8IU89 383 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 CCDC83Q8IWF9 413 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 BRF1Q92994 677 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 TCEANC2Q96MN5 208 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 CRNKL1Q9BZJ0 848 aaKnown RBP7.82□□□□□ -1.16
HDAC8-211ENST00000415409 RNF41Q9H4P4 317 aaPredicted RBP7.82□□□□□ -1.16
HDAC8-211ENST00000415409 CNNM2Q9H8M5 875 aa7.82□□□□□ -1.16
HDAC8-211ENST00000415409 V9GY48 417 aaPredicted RBP7.82□□□□□ -1.16
HDAC8-211ENST00000415409 COL1A1P02452 1464 aaPredicted RBP7.81□□□□□ -1.16
HDAC8-211ENST00000415409 WDR33Q9C0J8 1336 aaKnown RBP7.81□□□□□ -1.16
HDAC8-211ENST00000415409 C4AP0C0L4 1744 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 PRC1O43663 620 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 LARGE1O95461 756 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 PDCP20941 246 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 PRDX5P30044 214 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 PTGDRQ13258 359 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 CC2D2BQ6DHV5 1058 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 MFSD6Q6ZSS7 791 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 MB21D2Q8IYB1 491 aaPredicted RBP7.81□□□□□ -1.16
HDAC8-211ENST00000415409 FBXL16Q8N461 479 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 NECAB1Q8N987 351 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 GPR101Q96P66 508 aaPredicted RBP7.81□□□□□ -1.16
HDAC8-211ENST00000415409 RIOK1Q9BRS2 568 aaKnown RBP7.81□□□□□ -1.16
HDAC8-211ENST00000415409 KRT23Q9C075 422 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 EPB41L4AQ9HCS5 686 aaPredicted RBP7.81□□□□□ -1.16
HDAC8-211ENST00000415409 PPP1R1BQ9UD71 204 aaPredicted RBP7.81□□□□□ -1.16
HDAC8-211ENST00000415409 JAG2Q9Y219 1238 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 COL4A1P02462 1669 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 UBR3Q6ZT12 1888 aa7.81□□□□□ -1.16
HDAC8-211ENST00000415409 A0A0G2JLW4 131 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 PFKFB2O60825 505 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 BRD1O95696 1058 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 SLC3A2P08195 630 aaKnown RBP7.8□□□□□ -1.16
HDAC8-211ENST00000415409 PCP11498 1178 aaKnown RBP7.8□□□□□ -1.16
HDAC8-211ENST00000415409 GJB2P29033 226 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 DYNLL1P63167 89 aaKnown RBP7.8□□□□□ -1.16
HDAC8-211ENST00000415409 STK3Q13188 491 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 SART3Q15020 963 aaKnown RBP7.8□□□□□ -1.16
HDAC8-211ENST00000415409 GRIPAP1Q4V328 841 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 AKNAD1Q5T1N1 836 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 CLEC17AQ6ZS10 378 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 ADGRA1Q86SQ6 560 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 SLC51AQ86UW1 340 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 TBC1D10CQ8IV04 446 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 AMOTL1Q8IY63 956 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 SUPT20HQ8NEM7 779 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 STAG1Q8WVM7 1258 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 GTF3C6Q969F1 213 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 ZNF274Q96GC6 653 aaPredicted RBP7.8□□□□□ -1.16
HDAC8-211ENST00000415409 TMEM87BQ96K49 555 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 LLPHQ9BRT6 129 aaKnown RBP7.8□□□□□ -1.16
HDAC8-211ENST00000415409 LRRC2Q9BYS8 371 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 AGXT2Q9BYV1 514 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 TOMM22Q9NS69 142 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 ATP8A2Q9NTI2 1148 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 AATFQ9NY61 560 aaKnown RBP eCLIP7.8□□□□□ -1.16
HDAC8-211ENST00000415409 NAP1L2Q9ULW6 460 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms