RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 ZNF428Q96B54 188 aa6.54□□□□□ -1.36
PTPRK-210ENST00000415055 IFT43Q96FT9 208 aa6.54□□□□□ -1.36
PTPRK-210ENST00000415055 BCL11AQ9H165 835 aa6.54□□□□□ -1.36
PTPRK-210ENST00000415055 CXXC1Q9P0U4 656 aaPredicted RBP6.54□□□□□ -1.36
PTPRK-210ENST00000415055 TUBGCP6Q96RT7 1819 aa6.54□□□□□ -1.36
PTPRK-210ENST00000415055 SASH3O75995 380 aa6.53□□□□□ -1.36
PTPRK-210ENST00000415055 YBX3P16989 372 aaKnown RBP eCLIP6.53□□□□□ -1.36
PTPRK-210ENST00000415055 TARSP26639 723 aaKnown RBP6.53□□□□□ -1.36
PTPRK-210ENST00000415055 WEE1P30291 646 aa6.53□□□□□ -1.36
PTPRK-210ENST00000415055 FKBP5Q13451 457 aaPredicted RBP6.53□□□□□ -1.36
PTPRK-210ENST00000415055 MYO19Q96H55 970 aa6.53□□□□□ -1.36
PTPRK-210ENST00000415055 MPHOSPH9Q99550 1183 aa6.53□□□□□ -1.36
PTPRK-210ENST00000415055 CDK19Q9BWU1 502 aa6.53□□□□□ -1.36
PTPRK-210ENST00000415055 ARHGEF28Q8N1W1 1705 aaKnown RBP6.53□□□□□ -1.36
PTPRK-210ENST00000415055 NHSQ6T4R5 1651 aa6.52□□□□□ -1.37
PTPRK-210ENST00000415055 SERPINB4P48594 390 aa6.52□□□□□ -1.37
PTPRK-210ENST00000415055 MLLT1Q03111 559 aaPredicted RBP6.52□□□□□ -1.37
PTPRK-210ENST00000415055 LRP8Q14114 963 aa6.52□□□□□ -1.37
PTPRK-210ENST00000415055 ZNF827Q17R98 1081 aa6.52□□□□□ -1.37
PTPRK-210ENST00000415055 IGF2-ASQ6U949 168 aa6.52□□□□□ -1.37
PTPRK-210ENST00000415055 WFDC12Q8WWY7 111 aa6.52□□□□□ -1.37
PTPRK-210ENST00000415055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTPRK-210ENST00000415055 TFCP2L1Q9NZI6 479 aa6.52□□□□□ -1.37
PTPRK-210ENST00000415055 PCNTO95613 3336 aa6.51□□□□□ -1.37
PTPRK-210ENST00000415055 USP19O94966 1318 aa6.51□□□□□ -1.37
PTPRK-210ENST00000415055 WDR17Q8IZU2 1322 aa6.51□□□□□ -1.37
PTPRK-210ENST00000415055 QSER1Q2KHR3 1735 aa6.51□□□□□ -1.37
PTPRK-210ENST00000415055 PTCD1O75127 700 aaKnown RBP6.51□□□□□ -1.37
PTPRK-210ENST00000415055 IREB2P48200 963 aaKnown RBP6.51□□□□□ -1.37
PTPRK-210ENST00000415055 NRLP54845 237 aa6.51□□□□□ -1.37
PTPRK-210ENST00000415055 PLAURQ03405 335 aa6.51□□□□□ -1.37
PTPRK-210ENST00000415055 COL19A1Q14993 1142 aa6.51□□□□□ -1.37
PTPRK-210ENST00000415055 SMG9Q9H0W8 520 aaKnown RBP6.51□□□□□ -1.37
PTPRK-210ENST00000415055 ANO2Q9NQ90 1003 aa6.51□□□□□ -1.37
PTPRK-210ENST00000415055 SEPT3Q9UH03 358 aa6.51□□□□□ -1.37
PTPRK-210ENST00000415055 WWC3Q9ULE0 1092 aa6.51□□□□□ -1.37
PTPRK-210ENST00000415055 POLR3AO14802 1390 aaPredicted RBP6.51□□□□□ -1.37
PTPRK-210ENST00000415055 BRD4O60885 1362 aaPredicted RBP6.51□□□□□ -1.37
PTPRK-210ENST00000415055 AATKQ6ZMQ8 1374 aa6.51□□□□□ -1.37
PTPRK-210ENST00000415055 USP6P35125 1406 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 PAPPAQ13219 1627 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 COL18A1P39060 1754 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 ADGRB1O14514 1584 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 OPLAHO14841 1288 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 ABL1P00519 1130 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 EGFRP00533 1210 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 NOS3P29474 1203 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 NAA30Q147X3 362 aaPredicted RBP6.5□□□□□ -1.37
PTPRK-210ENST00000415055 HFE2Q6ZVN8 426 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 COL26A1Q96A83 441 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 KRTAP9-2Q9BYQ4 174 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 TLR7Q9NYK1 1049 aaKnown RBP6.5□□□□□ -1.37
PTPRK-210ENST00000415055 RTCBQ9Y3I0 505 aaKnown RBP6.5□□□□□ -1.37
PTPRK-210ENST00000415055 BCL9O00512 1426 aa6.5□□□□□ -1.37
PTPRK-210ENST00000415055 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.49□□□□□ -1.37
PTPRK-210ENST00000415055 HYAL3O43820 417 aaPredicted RBP6.49□□□□□ -1.37
PTPRK-210ENST00000415055 EIF2AK2P19525 551 aaKnown RBP6.49□□□□□ -1.37
PTPRK-210ENST00000415055 VAMP1P23763 118 aa6.49□□□□□ -1.37
PTPRK-210ENST00000415055 ZNF211Q13398 564 aaPredicted RBP6.49□□□□□ -1.37
PTPRK-210ENST00000415055 COL13A1Q5TAT6 717 aaPredicted RBP6.49□□□□□ -1.37
PTPRK-210ENST00000415055 DCAF11Q8TEB1 546 aa6.49□□□□□ -1.37
PTPRK-210ENST00000415055 SYTL4Q96C24 671 aaPredicted RBP6.49□□□□□ -1.37
PTPRK-210ENST00000415055 CARD10Q9BWT7 1032 aa6.49□□□□□ -1.37
PTPRK-210ENST00000415055 IGSF5Q9NSI5 407 aa6.49□□□□□ -1.37
PTPRK-210ENST00000415055 TNS2Q63HR2 1409 aa6.49□□□□□ -1.37
PTPRK-210ENST00000415055 PPIP5K1Q6PFW1 1433 aa6.49□□□□□ -1.37
PTPRK-210ENST00000415055 PNPLA7Q6ZV29 1317 aa6.49□□□□□ -1.37
PTPRK-210ENST00000415055 COL24A1Q17RW2 1714 aa6.48□□□□□ -1.37
PTPRK-210ENST00000415055 XYLBO75191 536 aa6.48□□□□□ -1.37
PTPRK-210ENST00000415055 DEAF1O75398 565 aaPredicted RBP6.48□□□□□ -1.37
PTPRK-210ENST00000415055 MTMR3Q13615 1198 aa6.48□□□□□ -1.37
PTPRK-210ENST00000415055 CMTR1Q8N1G2 835 aaKnown RBP6.48□□□□□ -1.37
PTPRK-210ENST00000415055 NLRP2Q9NX02 1062 aa6.48□□□□□ -1.37
PTPRK-210ENST00000415055 BIN2Q9UBW5 565 aaPredicted RBP6.48□□□□□ -1.37
PTPRK-210ENST00000415055 LRFN2Q9ULH4 789 aa6.48□□□□□ -1.37
PTPRK-210ENST00000415055 USP20Q9Y2K6 914 aa6.48□□□□□ -1.37
PTPRK-210ENST00000415055 WDR90Q96KV7 1748 aa6.47□□□□□ -1.37
PTPRK-210ENST00000415055 PIK3C2AO00443 1686 aa6.47□□□□□ -1.37
PTPRK-210ENST00000415055 DLL1O00548 723 aa6.47□□□□□ -1.37
PTPRK-210ENST00000415055 ICMTO60725 284 aa6.47□□□□□ -1.37
PTPRK-210ENST00000415055 PSAPP07602 524 aa6.47□□□□□ -1.37
PTPRK-210ENST00000415055 ZNF16P17020 682 aaPredicted RBP6.47□□□□□ -1.37
PTPRK-210ENST00000415055 TREML1Q86YW5 311 aa6.47□□□□□ -1.37
PTPRK-210ENST00000415055 RGL4Q8IZJ4 473 aa6.47□□□□□ -1.37
PTPRK-210ENST00000415055 GTF3C2Q8WUA4 911 aaPredicted RBP6.47□□□□□ -1.37
PTPRK-210ENST00000415055 PLD4Q96BZ4 506 aa6.47□□□□□ -1.37
PTPRK-210ENST00000415055 MEGF10Q96KG7 1140 aa6.47□□□□□ -1.37
PTPRK-210ENST00000415055 BCL2L13Q9BXK5 485 aa6.47□□□□□ -1.37
PTPRK-210ENST00000415055 CPSF1Q10570 1443 aaKnown RBP6.47□□□□□ -1.37
PTPRK-210ENST00000415055 CCDC7Q96M83 1385 aa6.46□□□□□ -1.37
PTPRK-210ENST00000415055 SLIT3O75094 1523 aa6.46□□□□□ -1.37
PTPRK-210ENST00000415055 QRICH2Q9H0J4 1663 aa6.46□□□□□ -1.37
PTPRK-210ENST00000415055 LOC102724428A0A0B4J2F2 783 aa6.46□□□□□ -1.38
PTPRK-210ENST00000415055 KRTAP9-6A0A140TA67 174 aa6.46□□□□□ -1.38
PTPRK-210ENST00000415055 J3QW42 95 aa6.46□□□□□ -1.38
PTPRK-210ENST00000415055 GHRHP01286 108 aa6.46□□□□□ -1.38
PTPRK-210ENST00000415055 PRELPP51888 382 aa6.46□□□□□ -1.38
PTPRK-210ENST00000415055 SIK1P57059 783 aa6.46□□□□□ -1.38
PTPRK-210ENST00000415055 ZSCAN29Q8IWY8 852 aaPredicted RBP6.46□□□□□ -1.38
PTPRK-210ENST00000415055 DDX54Q8TDD1 881 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms