RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 MCCP23508 829 aa15.79■□□□□ 0.12
CNN3-203ENST00000415017 TCP10Q12799 353 aa15.79■□□□□ 0.12
CNN3-203ENST00000415017 AKNAD1Q5T1N1 836 aa15.79■□□□□ 0.12
CNN3-203ENST00000415017 TMEM39BQ9GZU3 492 aa15.79■□□□□ 0.12
CNN3-203ENST00000415017 DNAJC18Q9H819 358 aa15.79■□□□□ 0.12
CNN3-203ENST00000415017 UPF2Q9HAU5 1272 aaKnown RBP15.79■□□□□ 0.12
CNN3-203ENST00000415017 VEZTQ9HBM0 779 aa15.79■□□□□ 0.12
CNN3-203ENST00000415017 SAP30BPQ9UHR5 308 aaKnown RBP15.79■□□□□ 0.12
CNN3-203ENST00000415017 SSC5DA1L4H1 1573 aa15.79■□□□□ 0.12
CNN3-203ENST00000415017 POTEIP0CG38 1075 aa15.78■□□□□ 0.12
CNN3-203ENST00000415017 POTEJP0CG39 1038 aa15.78■□□□□ 0.12
CNN3-203ENST00000415017 HAND2P61296 217 aa15.78■□□□□ 0.12
CNN3-203ENST00000415017 CTDSPL2Q05D32 466 aa15.78■□□□□ 0.12
CNN3-203ENST00000415017 KRT32Q14532 448 aa15.78■□□□□ 0.12
CNN3-203ENST00000415017 ADCK5Q3MIX3 580 aa15.78■□□□□ 0.12
CNN3-203ENST00000415017 TATDN1Q6P1N9 297 aa15.78■□□□□ 0.12
CNN3-203ENST00000415017 CDAN1Q8IWY9 1227 aa15.78■□□□□ 0.12
CNN3-203ENST00000415017 NKX2-3Q8TAU0 364 aa15.78■□□□□ 0.12
CNN3-203ENST00000415017 ATAD5Q96QE3 1844 aa15.78■□□□□ 0.12
CNN3-203ENST00000415017 MINDY4BA8MYZ0 360 aa15.77■□□□□ 0.12
CNN3-203ENST00000415017 POLR3DP05423 398 aaPredicted RBP15.77■□□□□ 0.12
CNN3-203ENST00000415017 ZKSCAN1P17029 563 aaPredicted RBP15.77■□□□□ 0.12
CNN3-203ENST00000415017 COL9A3Q14050 684 aaPredicted RBP15.77■□□□□ 0.12
CNN3-203ENST00000415017 LDHDQ86WU2 507 aa15.77■□□□□ 0.12
CNN3-203ENST00000415017 DCPSQ96C86 337 aaKnown RBP15.77■□□□□ 0.12
CNN3-203ENST00000415017 ZSWIM6Q9HCJ5 1215 aa15.77■□□□□ 0.12
CNN3-203ENST00000415017 SWAP70Q9UH65 585 aa15.77■□□□□ 0.12
CNN3-203ENST00000415017 HERC5Q9UII4 1024 aaKnown RBP15.77■□□□□ 0.12
CNN3-203ENST00000415017 SERPINB13Q9UIV8 391 aa15.77■□□□□ 0.12
CNN3-203ENST00000415017 TRPM7Q96QT4 1865 aa15.76■□□□□ 0.11
CNN3-203ENST00000415017 HLA-DOAP06340 250 aa15.76■□□□□ 0.11
CNN3-203ENST00000415017 SHMT1P34896 483 aa15.76■□□□□ 0.11
CNN3-203ENST00000415017 CDK8P49336 464 aa15.76■□□□□ 0.11
CNN3-203ENST00000415017 EXOSC10Q01780 885 aaKnown RBP15.76■□□□□ 0.11
CNN3-203ENST00000415017 AMOTL1Q8IY63 956 aa15.76■□□□□ 0.11
CNN3-203ENST00000415017 MB21D2Q8IYB1 491 aaPredicted RBP15.76■□□□□ 0.11
CNN3-203ENST00000415017 FBXL16Q8N461 479 aa15.76■□□□□ 0.11
CNN3-203ENST00000415017 IL27Q8NEV9 243 aa15.76■□□□□ 0.11
CNN3-203ENST00000415017 DYNLL2Q96FJ2 89 aa15.76■□□□□ 0.11
CNN3-203ENST00000415017 CSRNP1Q96S65 589 aa15.76■□□□□ 0.11
CNN3-203ENST00000415017 RNF41Q9H4P4 317 aaPredicted RBP15.76■□□□□ 0.11
CNN3-203ENST00000415017 INCENPQ9NQS7 918 aa15.76■□□□□ 0.11
CNN3-203ENST00000415017 NEDD4P46934 1319 aa15.75■□□□□ 0.11
CNN3-203ENST00000415017 OTOFQ9HC10 1997 aa15.75■□□□□ 0.11
CNN3-203ENST00000415017 RASA1P20936 1047 aa15.75■□□□□ 0.11
CNN3-203ENST00000415017 MFSD6Q6ZSS7 791 aa15.75■□□□□ 0.11
CNN3-203ENST00000415017 CDC37L1Q7L3B6 337 aa15.75■□□□□ 0.11
CNN3-203ENST00000415017 ALDH8A1Q9H2A2 487 aaPredicted RBP15.75■□□□□ 0.11
CNN3-203ENST00000415017 CNNM2Q9H8M5 875 aa15.75■□□□□ 0.11
CNN3-203ENST00000415017 SCAF8Q9UPN6 1271 aaKnown RBP15.75■□□□□ 0.11
CNN3-203ENST00000415017 PLIN4Q96Q06 1357 aa15.75■□□□□ 0.11
CNN3-203ENST00000415017 WDR19Q8NEZ3 1342 aa15.74■□□□□ 0.11
CNN3-203ENST00000415017 PHIPQ8WWQ0 1821 aa15.74■□□□□ 0.11
CNN3-203ENST00000415017 KIF3CO14782 793 aa15.74■□□□□ 0.11
CNN3-203ENST00000415017 SLC3A2P08195 630 aaKnown RBP15.74■□□□□ 0.11
CNN3-203ENST00000415017 SLURP2P0DP57 97 aa15.74■□□□□ 0.11
CNN3-203ENST00000415017 NOVP48745 357 aa15.74■□□□□ 0.11
CNN3-203ENST00000415017 PDE4BQ07343 736 aa15.74■□□□□ 0.11
CNN3-203ENST00000415017 NBPF12Q5TAG4 269 aaPredicted RBP15.74■□□□□ 0.11
CNN3-203ENST00000415017 SULF1Q8IWU6 871 aa15.74■□□□□ 0.11
CNN3-203ENST00000415017 NEK1Q96PY6 1258 aa15.74■□□□□ 0.11
CNN3-203ENST00000415017 MTA3Q9BTC8 594 aa15.74■□□□□ 0.11
CNN3-203ENST00000415017 ZNF112Q9UJU3 913 aa15.74■□□□□ 0.11
CNN3-203ENST00000415017 DOCK1Q14185 1865 aa15.74■□□□□ 0.11
CNN3-203ENST00000415017 PHF20L1A8MW92 1017 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 ADM5C9JUS6 153 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 HMGB1P09429 215 aaKnown RBP15.73■□□□□ 0.11
CNN3-203ENST00000415017 PSMA5P28066 241 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 ANTXR2P58335 489 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 RRP1BQ14684 758 aaKnown RBP15.73■□□□□ 0.11
CNN3-203ENST00000415017 EAPPQ56P03 285 aaPredicted RBP15.73■□□□□ 0.11
CNN3-203ENST00000415017 KRT26Q7Z3Y9 468 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 SLC44A5Q8NCS7 719 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 NCOA7Q8NI08 942 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 HOOK2Q96ED9 719 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 TTC14Q96N46 770 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 AGXT2Q9BYV1 514 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 KRT23Q9C075 422 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 ZNF287Q9HBT7 754 aa15.73■□□□□ 0.11
CNN3-203ENST00000415017 IGKV6D-41A0A0C4DH26 115 aa15.72■□□□□ 0.11
CNN3-203ENST00000415017 ITGBL1O95965 494 aaPredicted RBP15.72■□□□□ 0.11
CNN3-203ENST00000415017 SLC4A8Q2Y0W8 1093 aa15.72■□□□□ 0.11
CNN3-203ENST00000415017 SUPT20HL1Q3ZLR7 823 aa15.72■□□□□ 0.11
CNN3-203ENST00000415017 RUFY3Q7L099 469 aa15.72■□□□□ 0.11
CNN3-203ENST00000415017 CYB5R4Q7L1T6 521 aa15.72■□□□□ 0.11
CNN3-203ENST00000415017 USP48Q86UV5 1035 aa15.72■□□□□ 0.11
CNN3-203ENST00000415017 ZSCAN29Q8IWY8 852 aaPredicted RBP15.72■□□□□ 0.11
CNN3-203ENST00000415017 JAKMIP1Q96N16 626 aaKnown RBP15.72■□□□□ 0.11
CNN3-203ENST00000415017 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.72■□□□□ 0.11
CNN3-203ENST00000415017 GLIS2Q9BZE0 524 aaPredicted RBP15.72■□□□□ 0.11
CNN3-203ENST00000415017 TCP11L1Q9NUJ3 509 aa15.72■□□□□ 0.11
CNN3-203ENST00000415017 ZSWIM5Q9P217 1185 aa15.72■□□□□ 0.11
CNN3-203ENST00000415017 MYH4Q9Y623 1939 aa15.71■□□□□ 0.11
CNN3-203ENST00000415017 RPS6KB1P23443 525 aa15.71■□□□□ 0.11
CNN3-203ENST00000415017 RABEP1Q15276 862 aa15.71■□□□□ 0.11
CNN3-203ENST00000415017 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
CNN3-203ENST00000415017 MAP1SQ66K74 1059 aaPredicted RBP15.71■□□□□ 0.11
CNN3-203ENST00000415017 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
CNN3-203ENST00000415017 DLK2Q6UY11 383 aa15.71■□□□□ 0.11
CNN3-203ENST00000415017 DHX32Q7L7V1 743 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms