RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 SLC44A5Q8NCS7 719 aa15.6■□□□□ 0.09
CNOT4-204ENST00000414802 ZC3H15Q8WU90 426 aaKnown RBP15.6■□□□□ 0.09
CNOT4-204ENST00000414802 PGAP2Q9UHJ9 254 aa15.6■□□□□ 0.09
CNOT4-204ENST00000414802 CTNNA3Q9UI47 895 aa15.6■□□□□ 0.09
CNOT4-204ENST00000414802 ROBO3Q96MS0 1386 aa15.6■□□□□ 0.09
CNOT4-204ENST00000414802 GREB1LQ9C091 1923 aaPredicted RBP15.6■□□□□ 0.09
CNOT4-204ENST00000414802 HLA-DOAP06340 250 aa15.6■□□□□ 0.09
CNOT4-204ENST00000414802 HSPA4P34932 840 aa15.6■□□□□ 0.09
CNOT4-204ENST00000414802 NBPF12Q5TAG4 269 aaPredicted RBP15.6■□□□□ 0.09
CNOT4-204ENST00000414802 RASEFQ8IZ41 740 aa15.6■□□□□ 0.09
CNOT4-204ENST00000414802 INCENPQ9NQS7 918 aa15.6■□□□□ 0.09
CNOT4-204ENST00000414802 ZNF213O14771 459 aa15.59■□□□□ 0.09
CNOT4-204ENST00000414802 KIF3CO14782 793 aa15.59■□□□□ 0.09
CNOT4-204ENST00000414802 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
CNOT4-204ENST00000414802 STOX1Q6ZVD7 989 aa15.59■□□□□ 0.09
CNOT4-204ENST00000414802 TRAF5O00463 557 aa15.58■□□□□ 0.08
CNOT4-204ENST00000414802 PRDM1O75626 825 aa15.58■□□□□ 0.08
CNOT4-204ENST00000414802 MCCP23508 829 aa15.58■□□□□ 0.08
CNOT4-204ENST00000414802 FMR1Q06787 632 aaKnown RBP eCLIP15.58■□□□□ 0.08
CNOT4-204ENST00000414802 TTC6Q86TZ1 520 aa15.58■□□□□ 0.08
CNOT4-204ENST00000414802 ZNF784Q8NCA9 323 aaPredicted RBP15.58■□□□□ 0.08
CNOT4-204ENST00000414802 C22orf23Q9BZE7 217 aa15.58■□□□□ 0.08
CNOT4-204ENST00000414802 DHX36Q9H2U1 1008 aaKnown RBP15.58■□□□□ 0.08
CNOT4-204ENST00000414802 DNAJC18Q9H819 358 aa15.58■□□□□ 0.08
CNOT4-204ENST00000414802 UPF2Q9HAU5 1272 aaKnown RBP15.58■□□□□ 0.08
CNOT4-204ENST00000414802 FZD1Q9UP38 647 aa15.58■□□□□ 0.08
CNOT4-204ENST00000414802 SNX14Q9Y5W7 946 aa15.58■□□□□ 0.08
CNOT4-204ENST00000414802 NEDD4P46934 1319 aa15.58■□□□□ 0.08
CNOT4-204ENST00000414802 MIGA2Q7L4E1 593 aa15.57■□□□□ 0.08
CNOT4-204ENST00000414802 CRACR2BQ8N4Y2 399 aaPredicted RBP15.57■□□□□ 0.08
CNOT4-204ENST00000414802 NKX2-3Q8TAU0 364 aa15.57■□□□□ 0.08
CNOT4-204ENST00000414802 CDCA5Q96FF9 252 aa15.57■□□□□ 0.08
CNOT4-204ENST00000414802 ANAPC4Q9UJX5 808 aa15.57■□□□□ 0.08
CNOT4-204ENST00000414802 PPP2R3BQ9Y5P8 575 aa15.57■□□□□ 0.08
CNOT4-204ENST00000414802 EPB41L2O43491 1005 aaKnown RBP15.57■□□□□ 0.08
CNOT4-204ENST00000414802 COL9A3Q14050 684 aaPredicted RBP15.57■□□□□ 0.08
CNOT4-204ENST00000414802 TRIM34Q9BYJ4 488 aa15.57■□□□□ 0.08
CNOT4-204ENST00000414802 TOMM22Q9NS69 142 aa15.57■□□□□ 0.08
CNOT4-204ENST00000414802 PI4KBQ9UBF8 816 aa15.57■□□□□ 0.08
CNOT4-204ENST00000414802 SERPINB13Q9UIV8 391 aa15.57■□□□□ 0.08
CNOT4-204ENST00000414802 PHIPQ8WWQ0 1821 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 E7EWF7 191 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 GABPAQ06546 454 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 PRKG1Q13976 671 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 ADCK5Q3MIX3 580 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 RRP12Q5JTH9 1297 aaKnown RBP15.56■□□□□ 0.08
CNOT4-204ENST00000414802 AKNAD1Q5T1N1 836 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 RNF20Q5VTR2 975 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 CHADLQ6NUI6 762 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 C16orf86Q6ZW13 317 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 CDC37L1Q7L3B6 337 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 STAG1Q8WVM7 1258 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 KCNB2Q92953 911 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 EHD4Q9H223 541 aa15.56■□□□□ 0.08
CNOT4-204ENST00000414802 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.56■□□□□ 0.08
CNOT4-204ENST00000414802 SHMT1P34896 483 aa15.55■□□□□ 0.08
CNOT4-204ENST00000414802 CDK8P49336 464 aa15.55■□□□□ 0.08
CNOT4-204ENST00000414802 TBC1D32Q96NH3 1257 aa15.55■□□□□ 0.08
CNOT4-204ENST00000414802 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.55■□□□□ 0.08
CNOT4-204ENST00000414802 SLC3A2P08195 630 aaKnown RBP15.54■□□□□ 0.08
CNOT4-204ENST00000414802 ZKSCAN1P17029 563 aaPredicted RBP15.54■□□□□ 0.08
CNOT4-204ENST00000414802 SHROOM1Q2M3G4 852 aaPredicted RBP15.54■□□□□ 0.08
CNOT4-204ENST00000414802 MFSD6Q6ZSS7 791 aa15.54■□□□□ 0.08
CNOT4-204ENST00000414802 ZNF408Q9H9D4 720 aa15.54■□□□□ 0.08
CNOT4-204ENST00000414802 B4E1Z4 1266 aa15.54■□□□□ 0.08
CNOT4-204ENST00000414802 GDF11O95390 407 aa15.54■□□□□ 0.08
CNOT4-204ENST00000414802 CPA1P15085 419 aa15.54■□□□□ 0.08
CNOT4-204ENST00000414802 PDE4BQ07343 736 aa15.54■□□□□ 0.08
CNOT4-204ENST00000414802 JAKMIP1Q96N16 626 aaKnown RBP15.54■□□□□ 0.08
CNOT4-204ENST00000414802 MKNK2Q9HBH9 465 aa15.54■□□□□ 0.08
CNOT4-204ENST00000414802 PTPRFP10586 1907 aa15.53■□□□□ 0.08
CNOT4-204ENST00000414802 RASA1P20936 1047 aa15.53■□□□□ 0.08
CNOT4-204ENST00000414802 RBM25P49756 843 aaKnown RBP15.53■□□□□ 0.08
CNOT4-204ENST00000414802 RRP1BQ14684 758 aaKnown RBP15.53■□□□□ 0.08
CNOT4-204ENST00000414802 FAM47AQ5JRC9 791 aa15.53■□□□□ 0.08
CNOT4-204ENST00000414802 METTL16Q86W50 562 aaKnown RBP15.53■□□□□ 0.08
CNOT4-204ENST00000414802 FOXP4Q8IVH2 680 aaPredicted RBP15.53■□□□□ 0.08
CNOT4-204ENST00000414802 RNF41Q9H4P4 317 aaPredicted RBP15.53■□□□□ 0.08
CNOT4-204ENST00000414802 SWAP70Q9UH65 585 aa15.53■□□□□ 0.08
CNOT4-204ENST00000414802 HERC5Q9UII4 1024 aaKnown RBP15.53■□□□□ 0.08
CNOT4-204ENST00000414802 ORC4O43929 436 aa15.52■□□□□ 0.08
CNOT4-204ENST00000414802 RANBP6O60518 1105 aaKnown RBP15.52■□□□□ 0.08
CNOT4-204ENST00000414802 SUPT20HL1Q3ZLR7 823 aa15.52■□□□□ 0.08
CNOT4-204ENST00000414802 DCAF15Q66K64 600 aa15.52■□□□□ 0.08
CNOT4-204ENST00000414802 MOB2Q70IA6 237 aa15.52■□□□□ 0.08
CNOT4-204ENST00000414802 KDM4AO75164 1064 aa15.51■□□□□ 0.07
CNOT4-204ENST00000414802 AKR1B1P15121 316 aa15.51■□□□□ 0.07
CNOT4-204ENST00000414802 CASTP20810 708 aaKnown RBP15.51■□□□□ 0.07
CNOT4-204ENST00000414802 TSGA10IPQ3SY00 556 aa15.51■□□□□ 0.07
CNOT4-204ENST00000414802 CHST3Q7LGC8 479 aa15.51■□□□□ 0.07
CNOT4-204ENST00000414802 RALYLQ86SE5 291 aaKnown RBP15.51■□□□□ 0.07
CNOT4-204ENST00000414802 TCEANC2Q96MN5 208 aa15.51■□□□□ 0.07
CNOT4-204ENST00000414802 ZNF341Q9BYN7 854 aa15.51■□□□□ 0.07
CNOT4-204ENST00000414802 UPF3BQ9BZI7 483 aaKnown RBP15.51■□□□□ 0.07
CNOT4-204ENST00000414802 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.51■□□□□ 0.07
CNOT4-204ENST00000414802 TBC1D12O60347 775 aa15.51■□□□□ 0.07
CNOT4-204ENST00000414802 ITGBL1O95965 494 aaPredicted RBP15.51■□□□□ 0.07
CNOT4-204ENST00000414802 FGRP09769 529 aa15.51■□□□□ 0.07
CNOT4-204ENST00000414802 NF2P35240 595 aa15.51■□□□□ 0.07
CNOT4-204ENST00000414802 ANAPC15P60006 121 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms