RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 ATP5JP18859 108 aa31.98■■■□□ 2.71
VEGFA-207ENST00000413642 SLC9C2Q5TAH2 1124 aa31.98■■■□□ 2.71
VEGFA-207ENST00000413642 SLFNL1Q499Z3 407 aa31.97■■■□□ 2.71
VEGFA-207ENST00000413642 DHX36Q9H2U1 1008 aaKnown RBP31.97■■■□□ 2.71
VEGFA-207ENST00000413642 PI4KBQ9UBF8 816 aa31.97■■■□□ 2.71
VEGFA-207ENST00000413642 AFG3L2Q9Y4W6 797 aa31.97■■■□□ 2.71
VEGFA-207ENST00000413642 CXCL11O14625 94 aa31.96■■■□□ 2.71
VEGFA-207ENST00000413642 SP3Q02447 781 aa31.96■■■□□ 2.71
VEGFA-207ENST00000413642 RIOK1Q9BRS2 568 aaKnown RBP31.96■■■□□ 2.71
VEGFA-207ENST00000413642 PAG1Q9NWQ8 432 aa31.96■■■□□ 2.71
VEGFA-207ENST00000413642 ANKRD23Q86SG2 305 aa31.95■■■□□ 2.71
VEGFA-207ENST00000413642 DNAJC18Q9H819 358 aa31.95■■■□□ 2.71
VEGFA-207ENST00000413642 HPS5Q9UPZ3 1129 aa31.95■■■□□ 2.71
VEGFA-207ENST00000413642 TRIM17Q9Y577 477 aa31.95■■■□□ 2.71
VEGFA-207ENST00000413642 ZNF532Q9HCE3 1301 aa31.95■■■□□ 2.7
VEGFA-207ENST00000413642 PDHXO00330 501 aa31.94■■■□□ 2.7
VEGFA-207ENST00000413642 USP5P45974 858 aa31.94■■■□□ 2.7
VEGFA-207ENST00000413642 PKN2Q16513 984 aaKnown RBP31.94■■■□□ 2.7
VEGFA-207ENST00000413642 GPAT2Q6NUI2 795 aa31.94■■■□□ 2.7
VEGFA-207ENST00000413642 HAUS7Q99871 368 aa31.94■■■□□ 2.7
VEGFA-207ENST00000413642 HERC5Q9UII4 1024 aaKnown RBP31.94■■■□□ 2.7
VEGFA-207ENST00000413642 MAGEB6P1A0A0J9YX57 407 aa31.93■■■□□ 2.7
VEGFA-207ENST00000413642 TCRBV5S4A2TA0A5A2 114 aa31.93■■■□□ 2.7
VEGFA-207ENST00000413642 TRIM75PA6NK02 468 aa31.93■■■□□ 2.7
VEGFA-207ENST00000413642 CHGBP05060 677 aa31.93■■■□□ 2.7
VEGFA-207ENST00000413642 CAP2P40123 477 aa31.93■■■□□ 2.7
VEGFA-207ENST00000413642 JAG1P78504 1218 aa31.93■■■□□ 2.7
VEGFA-207ENST00000413642 OTOP1Q7RTM1 612 aa31.93■■■□□ 2.7
VEGFA-207ENST00000413642 ERO1AQ96HE7 468 aa31.93■■■□□ 2.7
VEGFA-207ENST00000413642 ZCCHC17Q9NP64 241 aaKnown RBP31.93■■■□□ 2.7
VEGFA-207ENST00000413642 TLR2O60603 784 aa31.92■■■□□ 2.7
VEGFA-207ENST00000413642 A0A0G2JLL6 359 aaPredicted RBP31.91■■■□□ 2.7
VEGFA-207ENST00000413642 SHROOM1Q2M3G4 852 aaPredicted RBP31.91■■■□□ 2.7
VEGFA-207ENST00000413642 TSHZ3Q63HK5 1081 aa31.91■■■□□ 2.7
VEGFA-207ENST00000413642 FBXO46Q6PJ61 603 aaPredicted RBP31.91■■■□□ 2.7
VEGFA-207ENST00000413642 PRRT2Q7Z6L0 340 aaPredicted RBP31.91■■■□□ 2.7
VEGFA-207ENST00000413642 FOXP4Q8IVH2 680 aaPredicted RBP31.91■■■□□ 2.7
VEGFA-207ENST00000413642 TMED8Q6PL24 325 aaPredicted RBP31.9■■■□□ 2.7
VEGFA-207ENST00000413642 GADL1Q6ZQY3 521 aa31.9■■■□□ 2.7
VEGFA-207ENST00000413642 METTL16Q86W50 562 aaKnown RBP31.9■■■□□ 2.7
VEGFA-207ENST00000413642 CRACR2BQ8N4Y2 399 aaPredicted RBP31.9■■■□□ 2.7
VEGFA-207ENST00000413642 ECHDC1Q9NTX5 307 aa31.9■■■□□ 2.7
VEGFA-207ENST00000413642 CPA4Q9UI42 421 aa31.9■■■□□ 2.7
VEGFA-207ENST00000413642 CERS3Q8IU89 383 aa31.89■■■□□ 2.7
VEGFA-207ENST00000413642 ECM2O94769 699 aaPredicted RBP31.88■■■□□ 2.69
VEGFA-207ENST00000413642 SPP2Q13103 211 aa31.88■■■□□ 2.69
VEGFA-207ENST00000413642 LCORLQ8N3X6 602 aa31.88■■■□□ 2.69
VEGFA-207ENST00000413642 EFCC1Q9HA90 598 aa31.88■■■□□ 2.69
VEGFA-207ENST00000413642 SIPA1L1O43166 1804 aa31.88■■■□□ 2.69
VEGFA-207ENST00000413642 GDF11O95390 407 aa31.87■■■□□ 2.69
VEGFA-207ENST00000413642 HLA-DOAP06340 250 aa31.87■■■□□ 2.69
VEGFA-207ENST00000413642 CYP2C8P10632 490 aa31.87■■■□□ 2.69
VEGFA-207ENST00000413642 ADD2P35612 726 aa31.87■■■□□ 2.69
VEGFA-207ENST00000413642 TRIM34Q9BYJ4 488 aa31.87■■■□□ 2.69
VEGFA-207ENST00000413642 ARHGAP39Q9C0H5 1083 aa31.87■■■□□ 2.69
VEGFA-207ENST00000413642 ARMT1Q9H993 441 aa31.87■■■□□ 2.69
VEGFA-207ENST00000413642 ADGRA2Q96PE1 1338 aa31.86■■■□□ 2.69
VEGFA-207ENST00000413642 C17orf99Q6UX52 265 aa31.86■■■□□ 2.69
VEGFA-207ENST00000413642 FASTKD5Q7L8L6 764 aaKnown RBP31.86■■■□□ 2.69
VEGFA-207ENST00000413642 DOCK1Q14185 1865 aa31.86■■■□□ 2.69
VEGFA-207ENST00000413642 CDK5RAP2Q96SN8 1893 aa31.85■■■□□ 2.69
VEGFA-207ENST00000413642 SOX10P56693 466 aa31.85■■■□□ 2.69
VEGFA-207ENST00000413642 EVX2Q03828 476 aa31.85■■■□□ 2.69
VEGFA-207ENST00000413642 OTUD7AQ8TE49 926 aaPredicted RBP31.85■■■□□ 2.69
VEGFA-207ENST00000413642 USP17L5A8MUK1 530 aa31.84■■■□□ 2.69
VEGFA-207ENST00000413642 ZNF280CQ8ND82 737 aa31.84■■■□□ 2.69
VEGFA-207ENST00000413642 SDR42E1Q8WUS8 393 aa31.84■■■□□ 2.69
VEGFA-207ENST00000413642 CRNKL1Q9BZJ0 848 aaKnown RBP31.84■■■□□ 2.69
VEGFA-207ENST00000413642 PTPN22Q9Y2R2 807 aa31.84■■■□□ 2.69
VEGFA-207ENST00000413642 PRKAB2O43741 272 aa31.83■■■□□ 2.69
VEGFA-207ENST00000413642 PLCD1P51178 756 aa31.83■■■□□ 2.69
VEGFA-207ENST00000413642 FOCADQ5VW36 1801 aa31.82■■■□□ 2.68
VEGFA-207ENST00000413642 MBD4O95243 580 aa31.82■■■□□ 2.68
VEGFA-207ENST00000413642 TREML2Q5T2D2 321 aa31.82■■■□□ 2.68
VEGFA-207ENST00000413642 PARK7Q99497 189 aaKnown RBP31.82■■■□□ 2.68
VEGFA-207ENST00000413642 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.82■■■□□ 2.681e-12■■■□□ 17.3
VEGFA-207ENST00000413642 CTGFP29279 349 aa31.81■■■□□ 2.68
VEGFA-207ENST00000413642 HMGCS2P54868 508 aa31.81■■■□□ 2.68
VEGFA-207ENST00000413642 LACTBP83111 547 aaPredicted RBP31.81■■■□□ 2.68
VEGFA-207ENST00000413642 TTC6Q86TZ1 520 aa31.81■■■□□ 2.68
VEGFA-207ENST00000413642 SERPINB13Q9UIV8 391 aa31.81■■■□□ 2.68
VEGFA-207ENST00000413642 POLR3DP05423 398 aaPredicted RBP31.8■■■□□ 2.68
VEGFA-207ENST00000413642 MCM9Q9NXL9 1143 aa31.8■■■□□ 2.68
VEGFA-207ENST00000413642 ZBTB21Q9ULJ3 1066 aa31.8■■■□□ 2.68
VEGFA-207ENST00000413642 PHIPQ8WWQ0 1821 aa31.79■■■□□ 2.68
VEGFA-207ENST00000413642 ASNSP08243 561 aa31.79■■■□□ 2.68
VEGFA-207ENST00000413642 CYP2D6P10635 497 aa31.79■■■□□ 2.68
VEGFA-207ENST00000413642 UBE3CQ15386 1083 aa31.79■■■□□ 2.68
VEGFA-207ENST00000413642 TATDN1Q6P1N9 297 aa31.79■■■□□ 2.68
VEGFA-207ENST00000413642 GPATCH3Q96I76 525 aa31.79■■■□□ 2.68
VEGFA-207ENST00000413642 EHD4Q9H223 541 aa31.79■■■□□ 2.68
VEGFA-207ENST00000413642 DCP1AQ9NPI6 582 aaPredicted RBP31.79■■■□□ 2.68
VEGFA-207ENST00000413642 AGTPBP1Q9UPW5 1226 aa31.79■■■□□ 2.68
VEGFA-207ENST00000413642 WDR18Q9BV38 432 aa31.78■■■□□ 2.68
VEGFA-207ENST00000413642 AS3MTQ9HBK9 375 aa31.78■■■□□ 2.68
VEGFA-207ENST00000413642 GH2P01242 217 aa31.77■■■□□ 2.68
VEGFA-207ENST00000413642 BCRP11274 1271 aa31.77■■■□□ 2.68
VEGFA-207ENST00000413642 RGS19P49795 217 aa31.77■■■□□ 2.68
VEGFA-207ENST00000413642 MTMR2Q13614 643 aa31.77■■■□□ 2.68
VEGFA-207ENST00000413642 TBC1D2Q9BYX2 928 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms