RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 TNNI2P48788 182 aa30.79■■■□□ 2.52
RHBDD3-203ENST00000413137 ANAPC15P60006 121 aa30.79■■■□□ 2.52
RHBDD3-203ENST00000413137 TNFAIP1Q13829 316 aa30.79■■■□□ 2.52
RHBDD3-203ENST00000413137 AKNAD1Q5T1N1 836 aa30.79■■■□□ 2.52
RHBDD3-203ENST00000413137 AMOTL1Q8IY63 956 aa30.79■■■□□ 2.52
RHBDD3-203ENST00000413137 STAG1Q8WVM7 1258 aa30.79■■■□□ 2.52
RHBDD3-203ENST00000413137 PRDM1O75626 825 aa30.78■■■□□ 2.52
RHBDD3-203ENST00000413137 CPA1P15085 419 aa30.78■■■□□ 2.52
RHBDD3-203ENST00000413137 JAKMIP1Q96N16 626 aaKnown RBP30.78■■■□□ 2.52
RHBDD3-203ENST00000413137 CSRNP1Q96S65 589 aa30.78■■■□□ 2.52
RHBDD3-203ENST00000413137 ROBO3Q96MS0 1386 aa30.78■■■□□ 2.52
RHBDD3-203ENST00000413137 POLR2AP24928 1970 aaKnown RBP30.78■■■□□ 2.52
RHBDD3-203ENST00000413137 LAMB1P07942 1786 aa30.77■■■□□ 2.52
RHBDD3-203ENST00000413137 FAM196BA6NMK8 535 aa30.77■■■□□ 2.52
RHBDD3-203ENST00000413137 GABPAQ06546 454 aa30.77■■■□□ 2.52
RHBDD3-203ENST00000413137 DCPSQ96C86 337 aaKnown RBP30.77■■■□□ 2.52
RHBDD3-203ENST00000413137 DNAJC18Q9H819 358 aa30.77■■■□□ 2.52
RHBDD3-203ENST00000413137 PITPNM2Q9BZ72 1349 aa30.77■■■□□ 2.52
RHBDD3-203ENST00000413137 COL2A1P02458 1487 aaPredicted RBP30.77■■■□□ 2.52
RHBDD3-203ENST00000413137 ADM5C9JUS6 153 aa30.76■■■□□ 2.52
RHBDD3-203ENST00000413137 MFSD6Q6ZSS7 791 aa30.76■■■□□ 2.52
RHBDD3-203ENST00000413137 ZC3H15Q8WU90 426 aaKnown RBP30.76■■■□□ 2.52
RHBDD3-203ENST00000413137 PI4KBQ9UBF8 816 aa30.76■■■□□ 2.52
RHBDD3-203ENST00000413137 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.76■■■□□ 2.52
RHBDD3-203ENST00000413137 SIPA1L1O43166 1804 aa30.76■■■□□ 2.51
RHBDD3-203ENST00000413137 HLA-DOAP06340 250 aa30.75■■■□□ 2.51
RHBDD3-203ENST00000413137 FGRP09769 529 aa30.75■■■□□ 2.51
RHBDD3-203ENST00000413137 C16orf86Q6ZW13 317 aa30.75■■■□□ 2.51
RHBDD3-203ENST00000413137 SERPINB13Q9UIV8 391 aa30.75■■■□□ 2.51
RHBDD3-203ENST00000413137 CDK8P49336 464 aa30.75■■■□□ 2.51
RHBDD3-203ENST00000413137 NBPF12Q5TAG4 269 aaPredicted RBP30.74■■■□□ 2.51
RHBDD3-203ENST00000413137 UPF3BQ9BZI7 483 aaKnown RBP30.74■■■□□ 2.51
RHBDD3-203ENST00000413137 EHD4Q9H223 541 aa30.74■■■□□ 2.51
RHBDD3-203ENST00000413137 CLEC11AQ9Y240 323 aa30.74■■■□□ 2.51
RHBDD3-203ENST00000413137 B4E1Z4 1266 aa30.73■■■□□ 2.51
RHBDD3-203ENST00000413137 CASTP20810 708 aaKnown RBP30.73■■■□□ 2.51
RHBDD3-203ENST00000413137 KRT32Q14532 448 aa30.73■■■□□ 2.51
RHBDD3-203ENST00000413137 RRP12Q5JTH9 1297 aaKnown RBP30.73■■■□□ 2.51
RHBDD3-203ENST00000413137 KRT26Q7Z3Y9 468 aa30.73■■■□□ 2.51
RHBDD3-203ENST00000413137 METTL16Q86W50 562 aaKnown RBP30.73■■■□□ 2.51
RHBDD3-203ENST00000413137 NEK1Q96PY6 1258 aa30.73■■■□□ 2.51
RHBDD3-203ENST00000413137 SLC3A2P08195 630 aaKnown RBP30.72■■■□□ 2.51
RHBDD3-203ENST00000413137 MIGA2Q7L4E1 593 aa30.72■■■□□ 2.51
RHBDD3-203ENST00000413137 USP48Q86UV5 1035 aa30.72■■■□□ 2.51
RHBDD3-203ENST00000413137 TOMM22Q9NS69 142 aa30.72■■■□□ 2.51
RHBDD3-203ENST00000413137 SHMT1P34896 483 aa30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 FOXP4Q8IVH2 680 aaPredicted RBP30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 SULF1Q8IWU6 871 aa30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 GLIS2Q9BZE0 524 aaPredicted RBP30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 RNF41Q9H4P4 317 aaPredicted RBP30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 ZSWIM6Q9HCJ5 1215 aa30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 PDE4BQ07343 736 aa30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 MAP1SQ66K74 1059 aaPredicted RBP30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 CHST3Q7LGC8 479 aa30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 MB21D2Q8IYB1 491 aaPredicted RBP30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 CRACR2BQ8N4Y2 399 aaPredicted RBP30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 NCOA7Q8NI08 942 aa30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 TCEANC2Q96MN5 208 aa30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 TM6SF1Q9BZW5 370 aa30.71■■■□□ 2.51
RHBDD3-203ENST00000413137 ORC4O43929 436 aa30.7■■■□□ 2.5
RHBDD3-203ENST00000413137 CYB5R4Q7L1T6 521 aa30.7■■■□□ 2.5
RHBDD3-203ENST00000413137 MKNK2Q9HBH9 465 aa30.7■■■□□ 2.5
RHBDD3-203ENST00000413137 KDM4AO75164 1064 aa30.69■■■□□ 2.5
RHBDD3-203ENST00000413137 RASA1P20936 1047 aa30.69■■■□□ 2.5
RHBDD3-203ENST00000413137 FAM47AQ5JRC9 791 aa30.69■■■□□ 2.5
RHBDD3-203ENST00000413137 ANTXR2P58335 489 aa30.68■■■□□ 2.5
RHBDD3-203ENST00000413137 RRP1BQ14684 758 aaKnown RBP30.68■■■□□ 2.5
RHBDD3-203ENST00000413137 ZSWIM5Q9P217 1185 aa30.68■■■□□ 2.5
RHBDD3-203ENST00000413137 PPP2R3BQ9Y5P8 575 aa30.68■■■□□ 2.5
RHBDD3-203ENST00000413137 RANBP6O60518 1105 aaKnown RBP30.67■■■□□ 2.5
RHBDD3-203ENST00000413137 PSMA5P28066 241 aa30.67■■■□□ 2.5
RHBDD3-203ENST00000413137 TRDNQ13061 729 aa30.67■■■□□ 2.5
RHBDD3-203ENST00000413137 RUFY3Q7L099 469 aa30.67■■■□□ 2.5
RHBDD3-203ENST00000413137 RALYLQ86SE5 291 aaKnown RBP30.67■■■□□ 2.5
RHBDD3-203ENST00000413137 KRT23Q9C075 422 aa30.67■■■□□ 2.5
RHBDD3-203ENST00000413137 CNNM2Q9H8M5 875 aa30.67■■■□□ 2.5
RHBDD3-203ENST00000413137 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.67■■■□□ 2.55e-6■■■□□ 17
RHBDD3-203ENST00000413137 SWAP70Q9UH65 585 aa30.67■■■□□ 2.5
RHBDD3-203ENST00000413137 FZD1Q9UP38 647 aa30.67■■■□□ 2.5
RHBDD3-203ENST00000413137 PCP11498 1178 aaKnown RBP30.66■■■□□ 2.5
RHBDD3-203ENST00000413137 RPS6KB1P23443 525 aa30.66■■■□□ 2.5
RHBDD3-203ENST00000413137 MAP3K10Q02779 954 aa30.66■■■□□ 2.5
RHBDD3-203ENST00000413137 SHROOM1Q2M3G4 852 aaPredicted RBP30.66■■■□□ 2.5
RHBDD3-203ENST00000413137 BLOC1S2Q6QNY1 142 aa30.66■■■□□ 2.5
RHBDD3-203ENST00000413137 LDHDQ86WU2 507 aa30.66■■■□□ 2.5
RHBDD3-203ENST00000413137 LRRC2Q9BYS8 371 aa30.66■■■□□ 2.5
RHBDD3-203ENST00000413137 SSC5DA1L4H1 1573 aa30.66■■■□□ 2.5
RHBDD3-203ENST00000413137 EXOSC10Q01780 885 aaKnown RBP30.66■■■□□ 2.5
RHBDD3-203ENST00000413137 TATDN1Q6P1N9 297 aa30.66■■■□□ 2.5
RHBDD3-203ENST00000413137 GPBP1L1Q9HC44 474 aaPredicted RBP30.66■■■□□ 2.5
RHBDD3-203ENST00000413137 TBC1D12O60347 775 aa30.65■■■□□ 2.5
RHBDD3-203ENST00000413137 NEK4P51957 841 aa30.65■■■□□ 2.5
RHBDD3-203ENST00000413137 FMR1Q06787 632 aaKnown RBP eCLIP30.65■■■□□ 2.5
RHBDD3-203ENST00000413137 RABEP1Q15276 862 aa30.65■■■□□ 2.5
RHBDD3-203ENST00000413137 CDC37L1Q7L3B6 337 aa30.65■■■□□ 2.5
RHBDD3-203ENST00000413137 DHX32Q7L7V1 743 aaKnown RBP30.65■■■□□ 2.5
RHBDD3-203ENST00000413137 ESR2Q92731 530 aa30.65■■■□□ 2.5
RHBDD3-203ENST00000413137 TRIM34Q9BYJ4 488 aa30.65■■■□□ 2.5
RHBDD3-203ENST00000413137 HERC5Q9UII4 1024 aaKnown RBP30.65■■■□□ 2.5
RHBDD3-203ENST00000413137 CYP46A1Q9Y6A2 500 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms