RNA–Protein interactions for RNA: ENST00000413013.6

SMIM29-203, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-203ENST00000413013 NEUROD6Q96NK8 337 aa21.62■■□□□ 1.05
SMIM29-203ENST00000413013 TFRCP02786 760 aaKnown RBP21.61■■□□□ 1.05
SMIM29-203ENST00000413013 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.61■■□□□ 1.05
SMIM29-203ENST00000413013 EVI5O60447 810 aa21.6■■□□□ 1.05
SMIM29-203ENST00000413013 RHBDL3P58872 404 aa21.6■■□□□ 1.05
SMIM29-203ENST00000413013 TRMT2AQ8IZ69 625 aaKnown RBP21.6■■□□□ 1.05
SMIM29-203ENST00000413013 SPATA5Q8NB90 893 aa21.6■■□□□ 1.05
SMIM29-203ENST00000413013 DEFB118Q96PH6 123 aa21.6■■□□□ 1.05
SMIM29-203ENST00000413013 NOL10Q9BSC4 688 aaKnown RBP21.6■■□□□ 1.05
SMIM29-203ENST00000413013 ZBTB7BO15156 539 aaPredicted RBP21.59■■□□□ 1.05
SMIM29-203ENST00000413013 GCLCP48506 637 aaPredicted RBP21.59■■□□□ 1.05
SMIM29-203ENST00000413013 MTX1Q13505 466 aa21.59■■□□□ 1.05
SMIM29-203ENST00000413013 TREML2Q5T2D2 321 aa21.59■■□□□ 1.05
SMIM29-203ENST00000413013 CCDC84Q86UT8 332 aaPredicted RBP21.59■■□□□ 1.05
SMIM29-203ENST00000413013 ZNF280CQ8ND82 737 aa21.59■■□□□ 1.05
SMIM29-203ENST00000413013 ARHGAP45Q92619 1136 aa21.59■■□□□ 1.05
SMIM29-203ENST00000413013 RAI14Q9P0K7 980 aa21.59■■□□□ 1.05
SMIM29-203ENST00000413013 MAST2Q6P0Q8 1798 aa21.59■■□□□ 1.05
SMIM29-203ENST00000413013 FAM196BA6NMK8 535 aa21.58■■□□□ 1.05
SMIM29-203ENST00000413013 SLURP2P0DP57 97 aa21.58■■□□□ 1.05
SMIM29-203ENST00000413013 NSUN4Q96CB9 384 aaKnown RBP21.58■■□□□ 1.05
SMIM29-203ENST00000413013 AS3MTQ9HBK9 375 aa21.58■■□□□ 1.05
SMIM29-203ENST00000413013 PAK6Q9NQU5 681 aaPredicted RBP21.58■■□□□ 1.05
SMIM29-203ENST00000413013 HMG20BQ9P0W2 317 aa21.58■■□□□ 1.05
SMIM29-203ENST00000413013 SPP2Q13103 211 aa21.57■■□□□ 1.04
SMIM29-203ENST00000413013 TEX11Q8IYF3 940 aa21.57■■□□□ 1.04
SMIM29-203ENST00000413013 HERC5Q9UII4 1024 aaKnown RBP21.57■■□□□ 1.04
SMIM29-203ENST00000413013 A0A1W2PPC1 479 aa21.56■■□□□ 1.04
SMIM29-203ENST00000413013 USP17L5A8MUK1 530 aa21.56■■□□□ 1.04
SMIM29-203ENST00000413013 HMGCRP04035 888 aa21.56■■□□□ 1.04
SMIM29-203ENST00000413013 ARID4AP29374 1257 aaPredicted RBP21.56■■□□□ 1.04
SMIM29-203ENST00000413013 RARSP54136 660 aaKnown RBP21.56■■□□□ 1.04
SMIM29-203ENST00000413013 HMGCS2P54868 508 aa21.56■■□□□ 1.04
SMIM29-203ENST00000413013 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.56■■□□□ 1.04
SMIM29-203ENST00000413013 LRP2BPQ9P2M1 347 aa21.56■■□□□ 1.04
SMIM29-203ENST00000413013 RANBP2P49792 3224 aaKnown RBP21.55■■□□□ 1.04
SMIM29-203ENST00000413013 UQCRFS1P1P0C7P4 283 aa21.55■■□□□ 1.04
SMIM29-203ENST00000413013 CAP2P40123 477 aa21.55■■□□□ 1.04
SMIM29-203ENST00000413013 PI16Q6UXB8 463 aa21.55■■□□□ 1.04
SMIM29-203ENST00000413013 ZNF384Q8TF68 577 aa21.55■■□□□ 1.04
SMIM29-203ENST00000413013 IPO8O15397 1037 aaKnown RBP21.54■■□□□ 1.04
SMIM29-203ENST00000413013 GNAI2P04899 355 aa21.54■■□□□ 1.04
SMIM29-203ENST00000413013 PLCG2P16885 1265 aa21.54■■□□□ 1.04
SMIM29-203ENST00000413013 G3BP1Q13283 466 aaKnown RBP eCLIP21.54■■□□□ 1.04
SMIM29-203ENST00000413013 TBC1D9Q6ZT07 1266 aa21.54■■□□□ 1.04
SMIM29-203ENST00000413013 NECAB2Q7Z6G3 386 aa21.54■■□□□ 1.04
SMIM29-203ENST00000413013 TRIM34Q9BYJ4 488 aa21.54■■□□□ 1.04
SMIM29-203ENST00000413013 CRISPLD2Q9H0B8 497 aa21.54■■□□□ 1.04
SMIM29-203ENST00000413013 PRO3102Q9H379 93 aa21.54■■□□□ 1.04
SMIM29-203ENST00000413013 BAG3O95817 575 aa21.53■■□□□ 1.04
SMIM29-203ENST00000413013 IRX3P78415 501 aaPredicted RBP21.53■■□□□ 1.04
SMIM29-203ENST00000413013 ANKLE1Q8NAG6 615 aa21.53■■□□□ 1.04
SMIM29-203ENST00000413013 ASCC2Q9H1I8 757 aaPredicted RBP21.53■■□□□ 1.04
SMIM29-203ENST00000413013 DHX36Q9H2U1 1008 aaKnown RBP21.53■■□□□ 1.04
SMIM29-203ENST00000413013 TMOD4Q9NZQ9 345 aa21.53■■□□□ 1.04
SMIM29-203ENST00000413013 SZT2Q5T011 3432 aa21.52■■□□□ 1.04
SMIM29-203ENST00000413013 MCAMP43121 646 aa21.52■■□□□ 1.04
SMIM29-203ENST00000413013 SH3D19Q5HYK7 790 aa21.52■■□□□ 1.04
SMIM29-203ENST00000413013 PAWRQ96IZ0 340 aaKnown RBP21.52■■□□□ 1.04
SMIM29-203ENST00000413013 PI4KBQ9UBF8 816 aa21.52■■□□□ 1.04
SMIM29-203ENST00000413013 DOCK3Q8IZD9 2030 aa21.51■■□□□ 1.03
SMIM29-203ENST00000413013 ASNSP08243 561 aa21.51■■□□□ 1.03
SMIM29-203ENST00000413013 NAA16Q6N069 864 aaPredicted RBP21.51■■□□□ 1.03
SMIM29-203ENST00000413013 SH3RF3Q8TEJ3 882 aaPredicted RBP21.51■■□□□ 1.03
SMIM29-203ENST00000413013 HMX1Q9NP08 348 aaPredicted RBP21.51■■□□□ 1.03
SMIM29-203ENST00000413013 CENPBP07199 599 aaPredicted RBP21.5■■□□□ 1.03
SMIM29-203ENST00000413013 MTMR2Q13614 643 aa21.5■■□□□ 1.03
SMIM29-203ENST00000413013 TTC39AQ5SRH9 613 aa21.5■■□□□ 1.03
SMIM29-203ENST00000413013 CRACR2BQ8N4Y2 399 aaPredicted RBP21.5■■□□□ 1.03
SMIM29-203ENST00000413013 AATFQ9NY61 560 aaKnown RBP eCLIP21.5■■□□□ 1.03
SMIM29-203ENST00000413013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.5■■□□□ 1.03
SMIM29-203ENST00000413013 RPTORQ8N122 1335 aa21.5■■□□□ 1.03
SMIM29-203ENST00000413013 CCDC158Q5M9N0 1113 aa21.49■■□□□ 1.03
SMIM29-203ENST00000413013 SOCS4Q8WXH5 440 aa21.49■■□□□ 1.03
SMIM29-203ENST00000413013 WDR18Q9BV38 432 aa21.49■■□□□ 1.03
SMIM29-203ENST00000413013 MORF4L1Q9UBU8 362 aa21.49■■□□□ 1.03
SMIM29-203ENST00000413013 SIPA1L1O43166 1804 aa21.49■■□□□ 1.03
SMIM29-203ENST00000413013 FOCADQ5VW36 1801 aa21.49■■□□□ 1.03
SMIM29-203ENST00000413013 ALPK3Q96L96 1907 aa21.49■■□□□ 1.03
SMIM29-203ENST00000413013 TRIM27P14373 513 aa21.48■■□□□ 1.03
SMIM29-203ENST00000413013 BACE1P56817 501 aa21.48■■□□□ 1.03
SMIM29-203ENST00000413013 OS9Q13438 667 aaPredicted RBP21.48■■□□□ 1.03
SMIM29-203ENST00000413013 PDE3AQ14432 1141 aa21.48■■□□□ 1.03
SMIM29-203ENST00000413013 ATF7IPQ6VMQ6 1270 aa21.48■■□□□ 1.03
SMIM29-203ENST00000413013 C7orf61Q8IZ16 206 aa21.48■■□□□ 1.03
SMIM29-203ENST00000413013 DIS3LQ8TF46 1054 aaKnown RBP21.48■■□□□ 1.03
SMIM29-203ENST00000413013 FRAT1Q92837 279 aaPredicted RBP21.48■■□□□ 1.03
SMIM29-203ENST00000413013 GINM1Q9NU53 330 aa21.48■■□□□ 1.03
SMIM29-203ENST00000413013 DDX60LQ5H9U9 1706 aaKnown RBP21.48■■□□□ 1.03
SMIM29-203ENST00000413013 FLT1P17948 1338 aa21.48■■□□□ 1.03
SMIM29-203ENST00000413013 PNMA6EA0A0J9YXQ4 647 aa21.47■■□□□ 1.03
SMIM29-203ENST00000413013 HLA-DOAP06340 250 aa21.47■■□□□ 1.03
SMIM29-203ENST00000413013 RRP1BQ14684 758 aaKnown RBP21.47■■□□□ 1.03
SMIM29-203ENST00000413013 MAPKAPK5Q8IW41 473 aa21.47■■□□□ 1.03
SMIM29-203ENST00000413013 CCAR1Q8IX12 1150 aaKnown RBP21.47■■□□□ 1.03
SMIM29-203ENST00000413013 GTF3C2Q8WUA4 911 aaPredicted RBP21.47■■□□□ 1.03
SMIM29-203ENST00000413013 NBPF3Q9H094 633 aa21.47■■□□□ 1.03
SMIM29-203ENST00000413013 CDK5RAP2Q96SN8 1893 aa21.47■■□□□ 1.03
SMIM29-203ENST00000413013 C19orf81C9J6K1 198 aa21.46■■□□□ 1.03
SMIM29-203ENST00000413013 IGSF3O75054 1194 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms