RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 GPATCH3Q96I76 525 aa22.83■■□□□ 1.25
TRIM56-202ENST00000412507 RIOK1Q9BRS2 568 aaKnown RBP22.83■■□□□ 1.25
TRIM56-202ENST00000412507 DHX36Q9H2U1 1008 aaKnown RBP22.83■■□□□ 1.25
TRIM56-202ENST00000412507 PALD1Q9ULE6 856 aa22.83■■□□□ 1.25
TRIM56-202ENST00000412507 GPR25O00155 361 aa22.82■■□□□ 1.24
TRIM56-202ENST00000412507 CTNND1O60716 968 aaKnown RBP22.82■■□□□ 1.24
TRIM56-202ENST00000412507 CETPP11597 493 aa22.82■■□□□ 1.24
TRIM56-202ENST00000412507 SLFNL1Q499Z3 407 aa22.82■■□□□ 1.24
TRIM56-202ENST00000412507 ZNF296Q8WUU4 475 aaPredicted RBP22.82■■□□□ 1.24
TRIM56-202ENST00000412507 PICK1Q9NRD5 415 aa22.82■■□□□ 1.24
TRIM56-202ENST00000412507 PI4KBQ9UBF8 816 aa22.82■■□□□ 1.24
TRIM56-202ENST00000412507 ADD2P35612 726 aa22.81■■□□□ 1.24
TRIM56-202ENST00000412507 SLC4A8Q2Y0W8 1093 aa22.81■■□□□ 1.24
TRIM56-202ENST00000412507 OTUD7AQ8TE49 926 aaPredicted RBP22.81■■□□□ 1.24
TRIM56-202ENST00000412507 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.81■■□□□ 1.24
TRIM56-202ENST00000412507 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.81■■□□□ 1.24
TRIM56-202ENST00000412507 HERC5Q9UII4 1024 aaKnown RBP22.81■■□□□ 1.24
TRIM56-202ENST00000412507 KCNH4Q9UQ05 1017 aa22.81■■□□□ 1.24
TRIM56-202ENST00000412507 CHGBP05060 677 aa22.8■■□□□ 1.24
TRIM56-202ENST00000412507 PTPRAP18433 802 aa22.8■■□□□ 1.24
TRIM56-202ENST00000412507 CRHR2Q13324 411 aa22.8■■□□□ 1.24
TRIM56-202ENST00000412507 DGKZQ13574 1117 aa22.8■■□□□ 1.24
TRIM56-202ENST00000412507 ANKRD45Q5TZF3 282 aa22.8■■□□□ 1.24
TRIM56-202ENST00000412507 FAM43AQ8N2R8 423 aa22.8■■□□□ 1.24
TRIM56-202ENST00000412507 GCC1Q96CN9 775 aa22.8■■□□□ 1.24
TRIM56-202ENST00000412507 ZHX2Q9Y6X8 837 aa22.8■■□□□ 1.24
TRIM56-202ENST00000412507 RRP1BQ14684 758 aaKnown RBP22.79■■□□□ 1.24
TRIM56-202ENST00000412507 NOM1Q5C9Z4 860 aaKnown RBP22.79■■□□□ 1.24
TRIM56-202ENST00000412507 LCORLQ8N3X6 602 aa22.79■■□□□ 1.24
TRIM56-202ENST00000412507 MCOLN1Q9GZU1 580 aa22.79■■□□□ 1.24
TRIM56-202ENST00000412507 BTBD19C9JJ37 291 aa22.78■■□□□ 1.24
TRIM56-202ENST00000412507 HLA-DOAP06340 250 aa22.78■■□□□ 1.24
TRIM56-202ENST00000412507 TAF1CQ15572 869 aaPredicted RBP22.78■■□□□ 1.24
TRIM56-202ENST00000412507 CCDC84Q86UT8 332 aaPredicted RBP22.78■■□□□ 1.24
TRIM56-202ENST00000412507 FOXP4Q8IVH2 680 aaPredicted RBP22.78■■□□□ 1.24
TRIM56-202ENST00000412507 CRACR2BQ8N4Y2 399 aaPredicted RBP22.78■■□□□ 1.24
TRIM56-202ENST00000412507 CRNKL1Q9BZJ0 848 aaKnown RBP22.78■■□□□ 1.24
TRIM56-202ENST00000412507 DNAJC18Q9H819 358 aa22.78■■□□□ 1.24
TRIM56-202ENST00000412507 ZBTB47Q9UFB7 747 aaPredicted RBP22.78■■□□□ 1.24
TRIM56-202ENST00000412507 TTC41PQ6P2S7 1318 aa22.78■■□□□ 1.24
TRIM56-202ENST00000412507 FKTNO75072 461 aa22.77■■□□□ 1.24
TRIM56-202ENST00000412507 CAPN15O75808 1086 aa22.77■■□□□ 1.24
TRIM56-202ENST00000412507 CAP2P40123 477 aa22.77■■□□□ 1.24
TRIM56-202ENST00000412507 ZSCAN25Q6NSZ9 544 aa22.77■■□□□ 1.24
TRIM56-202ENST00000412507 TRIM34Q9BYJ4 488 aa22.77■■□□□ 1.24
TRIM56-202ENST00000412507 ARMT1Q9H993 441 aa22.77■■□□□ 1.24
TRIM56-202ENST00000412507 AFG3L2Q9Y4W6 797 aa22.77■■□□□ 1.24
TRIM56-202ENST00000412507 LOC285556D6RIA3 1793 aa22.76■■□□□ 1.23
TRIM56-202ENST00000412507 CXCL11O14625 94 aa22.76■■□□□ 1.23
TRIM56-202ENST00000412507 UBE3CQ15386 1083 aa22.76■■□□□ 1.23
TRIM56-202ENST00000412507 METTL16Q86W50 562 aaKnown RBP22.76■■□□□ 1.23
TRIM56-202ENST00000412507 RWDD1Q9H446 243 aaPredicted RBP22.76■■□□□ 1.23
TRIM56-202ENST00000412507 ZSWIM8A7E2V4 1837 aa22.75■■□□□ 1.23
TRIM56-202ENST00000412507 ERC2O15083 957 aa22.75■■□□□ 1.23
TRIM56-202ENST00000412507 MBD4O95243 580 aa22.75■■□□□ 1.23
TRIM56-202ENST00000412507 MX1P20591 662 aa22.75■■□□□ 1.23
TRIM56-202ENST00000412507 IRX6P78412 446 aaPredicted RBP22.75■■□□□ 1.23
TRIM56-202ENST00000412507 MOGSQ13724 837 aa22.75■■□□□ 1.23
TRIM56-202ENST00000412507 CTU1Q7Z7A3 348 aaKnown RBP22.75■■□□□ 1.23
TRIM56-202ENST00000412507 KBTBD3Q8NAB2 608 aa22.75■■□□□ 1.23
TRIM56-202ENST00000412507 PI4K2BQ8TCG2 481 aa22.75■■□□□ 1.23
TRIM56-202ENST00000412507 SDR42E1Q8WUS8 393 aa22.75■■□□□ 1.23
TRIM56-202ENST00000412507 ABHD8Q96I13 439 aa22.75■■□□□ 1.23
TRIM56-202ENST00000412507 ZFYVE28Q9HCC9 887 aa22.75■■□□□ 1.23
TRIM56-202ENST00000412507 TTC6Q86TZ1 520 aa22.74■■□□□ 1.23
TRIM56-202ENST00000412507 SALL3Q9BXA9 1300 aa22.74■■□□□ 1.23
TRIM56-202ENST00000412507 MGAMO43451 1857 aa22.73■■□□□ 1.23
TRIM56-202ENST00000412507 A0A0G2JLL6 359 aaPredicted RBP22.73■■□□□ 1.23
TRIM56-202ENST00000412507 TRIM75PA6NK02 468 aa22.73■■□□□ 1.23
TRIM56-202ENST00000412507 PRKAB2O43741 272 aa22.73■■□□□ 1.23
TRIM56-202ENST00000412507 GLRX3O76003 335 aaKnown RBP22.73■■□□□ 1.23
TRIM56-202ENST00000412507 IGHDP01880 384 aa22.73■■□□□ 1.23
TRIM56-202ENST00000412507 PRRT2Q7Z6L0 340 aaPredicted RBP22.73■■□□□ 1.23
TRIM56-202ENST00000412507 ANKRD23Q86SG2 305 aa22.73■■□□□ 1.23
TRIM56-202ENST00000412507 PUS7LQ9H0K6 701 aaKnown RBP22.73■■□□□ 1.23
TRIM56-202ENST00000412507 ZCCHC17Q9NP64 241 aaKnown RBP22.73■■□□□ 1.23
TRIM56-202ENST00000412507 MCM9Q9NXL9 1143 aa22.73■■□□□ 1.23
TRIM56-202ENST00000412507 GDF11O95390 407 aa22.72■■□□□ 1.23
TRIM56-202ENST00000412507 POLR3DP05423 398 aaPredicted RBP22.72■■□□□ 1.23
TRIM56-202ENST00000412507 PLCD1P51178 756 aa22.72■■□□□ 1.23
TRIM56-202ENST00000412507 JAG1P78504 1218 aa22.72■■□□□ 1.23
TRIM56-202ENST00000412507 GADL1Q6ZQY3 521 aa22.72■■□□□ 1.23
TRIM56-202ENST00000412507 SMC5Q8IY18 1101 aa22.72■■□□□ 1.23
TRIM56-202ENST00000412507 DCP1AQ9NPI6 582 aaPredicted RBP22.72■■□□□ 1.23
TRIM56-202ENST00000412507 SERPINB13Q9UIV8 391 aa22.72■■□□□ 1.23
TRIM56-202ENST00000412507 USP17L5A8MUK1 530 aa22.71■■□□□ 1.23
TRIM56-202ENST00000412507 PDHXO00330 501 aa22.71■■□□□ 1.23
TRIM56-202ENST00000412507 SHROOM1Q2M3G4 852 aaPredicted RBP22.71■■□□□ 1.23
TRIM56-202ENST00000412507 B4GALNT3Q6L9W6 998 aa22.71■■□□□ 1.23
TRIM56-202ENST00000412507 GPAT2Q6NUI2 795 aa22.71■■□□□ 1.23
TRIM56-202ENST00000412507 EHD4Q9H223 541 aa22.71■■□□□ 1.23
TRIM56-202ENST00000412507 RNF113AO15541 343 aaKnown RBP22.7■■□□□ 1.22
TRIM56-202ENST00000412507 SP3Q02447 781 aa22.7■■□□□ 1.22
TRIM56-202ENST00000412507 EVX2Q03828 476 aa22.7■■□□□ 1.22
TRIM56-202ENST00000412507 SPP2Q13103 211 aa22.7■■□□□ 1.22
TRIM56-202ENST00000412507 FASTKD5Q7L8L6 764 aaKnown RBP22.7■■□□□ 1.22
TRIM56-202ENST00000412507 CD99L2Q8TCZ2 262 aa22.7■■□□□ 1.22
TRIM56-202ENST00000412507 LNPKQ9C0E8 428 aa22.7■■□□□ 1.22
TRIM56-202ENST00000412507 TLR2O60603 784 aa22.69■■□□□ 1.22
TRIM56-202ENST00000412507 ASNSP08243 561 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms