RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 HMX2A2RU54 273 aa7.32□□□□□ -1.24
LINC00342-201ENST00000412393 TPRNQ4KMQ1 711 aa7.32□□□□□ -1.24
LINC00342-201ENST00000412393 FAM117BQ6P1L5 589 aa7.32□□□□□ -1.24
LINC00342-201ENST00000412393 FAM20CQ8IXL6 584 aa7.32□□□□□ -1.24
LINC00342-201ENST00000412393 TMC1Q8TDI8 760 aa7.32□□□□□ -1.24
LINC00342-201ENST00000412393 VTI1AQ96AJ9 217 aa7.32□□□□□ -1.24
LINC00342-201ENST00000412393 ASIC4Q96FT7 647 aa7.32□□□□□ -1.24
LINC00342-201ENST00000412393 NSUN5Q96P11 429 aaKnown RBP7.32□□□□□ -1.24
LINC00342-201ENST00000412393 USP35Q9P2H5 1018 aa7.32□□□□□ -1.24
LINC00342-201ENST00000412393 TRIM33Q9UPN9 1127 aa7.32□□□□□ -1.24
LINC00342-201ENST00000412393 LTN1O94822 1766 aa7.32□□□□□ -1.24
LINC00342-201ENST00000412393 AATKQ6ZMQ8 1374 aa7.32□□□□□ -1.24
LINC00342-201ENST00000412393 WNK3Q9BYP7 1800 aa7.31□□□□□ -1.24
LINC00342-201ENST00000412393 COL5A2P05997 1499 aaPredicted RBP7.31□□□□□ -1.24
LINC00342-201ENST00000412393 ST20-MTHFSA0A0A6YYL1 179 aa7.31□□□□□ -1.24
LINC00342-201ENST00000412393 ANKRD34AQ69YU3 496 aa7.31□□□□□ -1.24
LINC00342-201ENST00000412393 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.31□□□□□ -1.24
LINC00342-201ENST00000412393 HDGFL2Q7Z4V5 671 aaPredicted RBP7.31□□□□□ -1.24
LINC00342-201ENST00000412393 DEFB132Q7Z7B7 95 aa7.31□□□□□ -1.24
LINC00342-201ENST00000412393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC00342-201ENST00000412393 TCP11L2Q8N4U5 519 aa7.31□□□□□ -1.24
LINC00342-201ENST00000412393 KCNH5Q8NCM2 988 aa7.31□□□□□ -1.24
LINC00342-201ENST00000412393 GALNT11Q8NCW6 608 aa7.31□□□□□ -1.24
LINC00342-201ENST00000412393 SHKBP1Q8TBC3 707 aa7.31□□□□□ -1.24
LINC00342-201ENST00000412393 PUS7Q96PZ0 661 aaKnown RBP7.31□□□□□ -1.24
LINC00342-201ENST00000412393 TESK2Q96S53 571 aa7.31□□□□□ -1.24
LINC00342-201ENST00000412393 SLC12A5Q9H2X9 1139 aa7.31□□□□□ -1.24
LINC00342-201ENST00000412393 TNS1Q9HBL0 1735 aaKnown RBP7.31□□□□□ -1.24
LINC00342-201ENST00000412393 PARP4Q9UKK3 1724 aaKnown RBP7.31□□□□□ -1.24
LINC00342-201ENST00000412393 ANGEL1Q9UNK9 670 aaKnown RBP7.31□□□□□ -1.24
LINC00342-201ENST00000412393 CD163L1Q9NR16 1453 aa7.3□□□□□ -1.24
LINC00342-201ENST00000412393 CRB1P82279 1406 aa7.3□□□□□ -1.24
LINC00342-201ENST00000412393 DUOXA2Q1HG44 320 aa7.3□□□□□ -1.24
LINC00342-201ENST00000412393 OGFOD2Q6N063 350 aa7.3□□□□□ -1.24
LINC00342-201ENST00000412393 SPACA7Q96KW9 195 aa7.3□□□□□ -1.24
LINC00342-201ENST00000412393 TERF2IPQ9NYB0 399 aa7.3□□□□□ -1.24
LINC00342-201ENST00000412393 NFAT5O94916 1531 aa7.3□□□□□ -1.24
LINC00342-201ENST00000412393 SBF2Q86WG5 1849 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 KAT6BQ8WYB5 2073 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 EDC4Q6P2E9 1401 aaKnown RBP7.29□□□□□ -1.24
LINC00342-201ENST00000412393 SART1O43290 800 aaKnown RBP7.29□□□□□ -1.24
LINC00342-201ENST00000412393 SMNDC1O75940 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
LINC00342-201ENST00000412393 WISP1O95388 367 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 JUNBP17275 347 aaPredicted RBP7.29□□□□□ -1.24
LINC00342-201ENST00000412393 CDC27P30260 824 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 PDE3BQ13370 1112 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 KIAA1211Q6ZU35 1233 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 ARHGEF25Q86VW2 580 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 NME9Q86XW9 330 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 RGL4Q8IZJ4 473 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 CMTR1Q8N1G2 835 aaKnown RBP7.29□□□□□ -1.24
LINC00342-201ENST00000412393 WNT8BQ93098 351 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 FBXL18Q96ME1 805 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 PIM2Q9P1W9 311 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 TIMELESSQ9UNS1 1208 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 THRAP3Q9Y2W1 955 aaKnown RBP7.29□□□□□ -1.24
LINC00342-201ENST00000412393 A0A1W2PP64 1363 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 USP31Q70CQ4 1352 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 USP47Q96K76 1375 aa7.29□□□□□ -1.24
LINC00342-201ENST00000412393 WDR17Q8IZU2 1322 aa7.28□□□□□ -1.24
LINC00342-201ENST00000412393 LRRC37A3O60309 1634 aa7.28□□□□□ -1.24
LINC00342-201ENST00000412393 LINC01387J3KSC0 135 aa7.28□□□□□ -1.24
LINC00342-201ENST00000412393 WEE1P30291 646 aa7.28□□□□□ -1.24
LINC00342-201ENST00000412393 PTK7Q13308 1070 aa7.28□□□□□ -1.24
LINC00342-201ENST00000412393 FAM196AQ6ZSG2 479 aa7.28□□□□□ -1.24
LINC00342-201ENST00000412393 BEND4Q6ZU67 534 aa7.28□□□□□ -1.24
LINC00342-201ENST00000412393 TOM1L2Q6ZVM7 507 aa7.28□□□□□ -1.24
LINC00342-201ENST00000412393 KCNMB2Q9Y691 235 aa7.28□□□□□ -1.24
LINC00342-201ENST00000412393 NINLQ9Y2I6 1382 aa7.28□□□□□ -1.24
LINC00342-201ENST00000412393 ABCC6O95255 1503 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 FAM196BA6NMK8 535 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 FAM177BA6PVY3 158 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 POM121CA8CG34 1229 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 TM4SF5O14894 197 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 FSCN2O14926 492 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 TRIM37O94972 964 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 PRNPP04156 253 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 TMF1P82094 1093 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 DPYDQ12882 1025 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 HYAL2Q12891 473 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 CBLL1Q75N03 491 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 TREML1Q86YW5 311 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 ABI1Q8IZP0 508 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 OR13H1Q8NG92 308 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 MAFBQ9Y5Q3 323 aaPredicted RBP7.27□□□□□ -1.25
LINC00342-201ENST00000412393 KIF20BQ96Q89 1820 aa7.27□□□□□ -1.25
LINC00342-201ENST00000412393 C8AP07357 584 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 BMP3P12645 472 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 DDB1Q16531 1140 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 CDCA8Q53HL2 280 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 ANKMY2Q8IV38 441 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 CARD10Q9BWT7 1032 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 RNF208Q9H0X6 261 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 FAM13BQ9NYF5 915 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 PEAK1Q9H792 1746 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 OVOS2A0A0J9YW53 1432 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 DISP2A7MBM2 1401 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 OVOS2Q6IE36 1432 aa7.26□□□□□ -1.25
LINC00342-201ENST00000412393 RGPD2P0DJD1 1756 aa7.25□□□□□ -1.25
LINC00342-201ENST00000412393 ANKRD36BQ8N2N9 1353 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms