RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 PLCG2P16885 1265 aa14.14□□□□□ -0.15
LINC00963-201ENST00000412141 RRP1BQ14684 758 aaKnown RBP14.14□□□□□ -0.15
LINC00963-201ENST00000412141 KIF22Q14807 665 aa14.14□□□□□ -0.15
LINC00963-201ENST00000412141 GPAT2Q6NUI2 795 aa14.14□□□□□ -0.15
LINC00963-201ENST00000412141 CLASRPQ8N2M8 674 aaKnown RBP14.14□□□□□ -0.15
LINC00963-201ENST00000412141 DNAJC2Q99543 621 aaKnown RBP14.14□□□□□ -0.15
LINC00963-201ENST00000412141 AFG3L2Q9Y4W6 797 aa14.14□□□□□ -0.15
LINC00963-201ENST00000412141 PTCH2Q9Y6C5 1203 aa14.14□□□□□ -0.15
LINC00963-201ENST00000412141 DOCK2Q92608 1830 aa14.13□□□□□ -0.15
LINC00963-201ENST00000412141 KIAA0100Q14667 2235 aaKnown RBP14.13□□□□□ -0.15
LINC00963-201ENST00000412141 PPP4CP60510 307 aa14.13□□□□□ -0.15
LINC00963-201ENST00000412141 LACTBP83111 547 aaPredicted RBP14.13□□□□□ -0.15
LINC00963-201ENST00000412141 MAP3K12Q12852 859 aa14.13□□□□□ -0.15
LINC00963-201ENST00000412141 ARHGEF6Q15052 776 aa14.13□□□□□ -0.15
LINC00963-201ENST00000412141 C17orf99Q6UX52 265 aa14.13□□□□□ -0.15
LINC00963-201ENST00000412141 FASTKD5Q7L8L6 764 aaKnown RBP14.13□□□□□ -0.15
LINC00963-201ENST00000412141 CRACR2BQ8N4Y2 399 aaPredicted RBP14.13□□□□□ -0.15
LINC00963-201ENST00000412141 KIF1BPQ96EK5 621 aa14.13□□□□□ -0.15
LINC00963-201ENST00000412141 TRIM34Q9BYJ4 488 aa14.13□□□□□ -0.15
LINC00963-201ENST00000412141 ZCCHC17Q9NP64 241 aaKnown RBP14.13□□□□□ -0.15
LINC00963-201ENST00000412141 FLT1P17948 1338 aa14.13□□□□□ -0.15
LINC00963-201ENST00000412141 MYO5AQ9Y4I1 1855 aaKnown RBP14.12□□□□□ -0.15
LINC00963-201ENST00000412141 A0A0G2JLL6 359 aaPredicted RBP14.12□□□□□ -0.15
LINC00963-201ENST00000412141 GOLIM4O00461 696 aa14.12□□□□□ -0.15
LINC00963-201ENST00000412141 TBC1D12O60347 775 aa14.12□□□□□ -0.15
LINC00963-201ENST00000412141 FMNL1O95466 1100 aaPredicted RBP14.12□□□□□ -0.15
LINC00963-201ENST00000412141 PSMC4P43686 418 aa14.12□□□□□ -0.15
LINC00963-201ENST00000412141 USP5P45974 858 aa14.12□□□□□ -0.15
LINC00963-201ENST00000412141 SPP2Q13103 211 aa14.12□□□□□ -0.15
LINC00963-201ENST00000412141 SHROOM1Q2M3G4 852 aaPredicted RBP14.12□□□□□ -0.15
LINC00963-201ENST00000412141 PRRT2Q7Z6L0 340 aaPredicted RBP14.12□□□□□ -0.15
LINC00963-201ENST00000412141 EDC3Q96F86 508 aaKnown RBP14.12□□□□□ -0.15
LINC00963-201ENST00000412141 YTHDC1Q96MU7 727 aaKnown RBP14.12□□□□□ -0.15
LINC00963-201ENST00000412141 CHMP4BQ9H444 224 aaKnown RBP14.12□□□□□ -0.15
LINC00963-201ENST00000412141 PI4KBQ9UBF8 816 aa14.12□□□□□ -0.15
LINC00963-201ENST00000412141 POTEFA5A3E0 1075 aa14.11□□□□□ -0.15
LINC00963-201ENST00000412141 SMARCA5O60264 1052 aaPredicted RBP14.11□□□□□ -0.15
LINC00963-201ENST00000412141 GDF11O95390 407 aa14.11□□□□□ -0.15
LINC00963-201ENST00000412141 CTGFP29279 349 aa14.11□□□□□ -0.15
LINC00963-201ENST00000412141 CAP2P40123 477 aa14.11□□□□□ -0.15
LINC00963-201ENST00000412141 SLC9C1Q4G0N8 1177 aa14.11□□□□□ -0.15
LINC00963-201ENST00000412141 SH3TC2Q8TF17 1288 aa14.11□□□□□ -0.15
LINC00963-201ENST00000412141 TRIM47Q96LD4 638 aa14.11□□□□□ -0.15
LINC00963-201ENST00000412141 PARK7Q99497 189 aaKnown RBP14.11□□□□□ -0.15
LINC00963-201ENST00000412141 RAB11FIP3O75154 756 aa14.1□□□□□ -0.15
LINC00963-201ENST00000412141 HMGCS2P54868 508 aa14.1□□□□□ -0.15
LINC00963-201ENST00000412141 JAG1P78504 1218 aa14.1□□□□□ -0.15
LINC00963-201ENST00000412141 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
LINC00963-201ENST00000412141 TREML2Q5T2D2 321 aa14.1□□□□□ -0.15
LINC00963-201ENST00000412141 SLC9C2Q5TAH2 1124 aa14.1□□□□□ -0.15
LINC00963-201ENST00000412141 ZNF280CQ8ND82 737 aa14.1□□□□□ -0.15
LINC00963-201ENST00000412141 SMCR8Q8TEV9 937 aaPredicted RBP14.1□□□□□ -0.15
LINC00963-201ENST00000412141 DHX36Q9H2U1 1008 aaKnown RBP14.1□□□□□ -0.15
LINC00963-201ENST00000412141 BOLA2Q9H3K6 86 aa14.1□□□□□ -0.15
LINC00963-201ENST00000412141 HERC5Q9UII4 1024 aaKnown RBP14.1□□□□□ -0.15
LINC00963-201ENST00000412141 ZSWIM8A7E2V4 1837 aa14.1□□□□□ -0.15
LINC00963-201ENST00000412141 USP17L5A8MUK1 530 aa14.09□□□□□ -0.15
LINC00963-201ENST00000412141 HLA-DOAP06340 250 aa14.09□□□□□ -0.15
LINC00963-201ENST00000412141 PDE6AP16499 860 aa14.09□□□□□ -0.15
LINC00963-201ENST00000412141 SLFNL1Q499Z3 407 aa14.09□□□□□ -0.15
LINC00963-201ENST00000412141 PRPF38BQ5VTL8 546 aaKnown RBP14.09□□□□□ -0.15
LINC00963-201ENST00000412141 FOXP4Q8IVH2 680 aaPredicted RBP14.09□□□□□ -0.15
LINC00963-201ENST00000412141 DNAJC18Q9H819 358 aa14.09□□□□□ -0.15
LINC00963-201ENST00000412141 MAGEB6P1A0A0J9YX57 407 aa14.08□□□□□ -0.16
LINC00963-201ENST00000412141 EN2P19622 333 aaPredicted RBP14.08□□□□□ -0.16
LINC00963-201ENST00000412141 TTF1Q15361 905 aaPredicted RBP14.08□□□□□ -0.16
LINC00963-201ENST00000412141 ADGRA2Q96PE1 1338 aa14.08□□□□□ -0.16
LINC00963-201ENST00000412141 ZNF532Q9HCE3 1301 aa14.08□□□□□ -0.16
LINC00963-201ENST00000412141 COL2A1P02458 1487 aaPredicted RBP14.07□□□□□ -0.16
LINC00963-201ENST00000412141 BCRP11274 1271 aa14.07□□□□□ -0.16
LINC00963-201ENST00000412141 OSBPP22059 807 aa14.07□□□□□ -0.16
LINC00963-201ENST00000412141 MTMR2Q13614 643 aa14.07□□□□□ -0.16
LINC00963-201ENST00000412141 NBPF11Q86T75 865 aa14.07□□□□□ -0.16
LINC00963-201ENST00000412141 RAET1EQ8TD07 263 aa14.07□□□□□ -0.16
LINC00963-201ENST00000412141 ARMC5Q96C12 935 aa14.07□□□□□ -0.16
LINC00963-201ENST00000412141 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
LINC00963-201ENST00000412141 LRRCC1Q9C099 1032 aa14.07□□□□□ -0.16
LINC00963-201ENST00000412141 BIN2Q9UBW5 565 aaPredicted RBP14.07□□□□□ -0.16
LINC00963-201ENST00000412141 SRRDQ9UH36 339 aa14.07□□□□□ -0.16
LINC00963-201ENST00000412141 AGTPBP1Q9UPW5 1226 aa14.07□□□□□ -0.16
LINC00963-201ENST00000412141 DOCK1Q14185 1865 aa14.07□□□□□ -0.16
LINC00963-201ENST00000412141 MAST2Q6P0Q8 1798 aa14.06□□□□□ -0.16
LINC00963-201ENST00000412141 CHGBP05060 677 aa14.06□□□□□ -0.16
LINC00963-201ENST00000412141 HOXD10P28358 340 aa14.06□□□□□ -0.16
LINC00963-201ENST00000412141 ANKRD13CQ8N6S4 541 aa14.06□□□□□ -0.16
LINC00963-201ENST00000412141 ZNF333Q96JL9 665 aa14.06□□□□□ -0.16
LINC00963-201ENST00000412141 RIOK1Q9BRS2 568 aaKnown RBP14.06□□□□□ -0.16
LINC00963-201ENST00000412141 AS3MTQ9HBK9 375 aa14.06□□□□□ -0.16
LINC00963-201ENST00000412141 PAG1Q9NWQ8 432 aa14.06□□□□□ -0.16
LINC00963-201ENST00000412141 TAOK2Q9UL54 1235 aa14.06□□□□□ -0.16
LINC00963-201ENST00000412141 GH2P01242 217 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 POLR3DP05423 398 aaPredicted RBP14.05□□□□□ -0.16
LINC00963-201ENST00000412141 ASNSP08243 561 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 ATP5JP18859 108 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 PLCD1P51178 756 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 FCGRTP55899 365 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 EVX2Q03828 476 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 PRKCZQ05513 592 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 ZYXQ15942 572 aaKnown RBP14.05□□□□□ -0.16
LINC00963-201ENST00000412141 SDR42E1Q8WUS8 393 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms