RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 CCAR1Q8IX12 1150 aaKnown RBP8.69□□□□□ -1.02
LSM8-202ENST00000411938 PROCA1Q8NCQ7 364 aaPredicted RBP8.69□□□□□ -1.02
LSM8-202ENST00000411938 SOCS4Q8WXH5 440 aa8.69□□□□□ -1.02
LSM8-202ENST00000411938 BADQ92934 168 aa8.69□□□□□ -1.02
LSM8-202ENST00000411938 ASB2Q96Q27 587 aa8.69□□□□□ -1.02
LSM8-202ENST00000411938 C1QTNF1Q9BXJ1 281 aa8.69□□□□□ -1.02
LSM8-202ENST00000411938 ASCC2Q9H1I8 757 aaPredicted RBP8.69□□□□□ -1.02
LSM8-202ENST00000411938 MROH5Q6ZUA9 1318 aa8.69□□□□□ -1.02
LSM8-202ENST00000411938 APAF1O14727 1248 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 SLURP2P0DP57 97 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 RGS3P49796 1198 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 HMGCS2P54868 508 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 IRX3P78415 501 aaPredicted RBP8.68□□□□□ -1.02
LSM8-202ENST00000411938 MRPS5P82675 430 aaKnown RBP8.68□□□□□ -1.02
LSM8-202ENST00000411938 RALBP1Q15311 655 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 CCL14Q16627 93 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 METTL24Q5JXM2 366 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 WDR66Q8TBY9 1149 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 TSR2Q969E8 191 aaKnown RBP8.68□□□□□ -1.02
LSM8-202ENST00000411938 RNPC3Q96LT9 517 aaKnown RBP8.68□□□□□ -1.02
LSM8-202ENST00000411938 SPINK5Q9NQ38 1064 aaPredicted RBP8.68□□□□□ -1.02
LSM8-202ENST00000411938 THEGQ9P2T0 379 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 MORF4L1Q9UBU8 362 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 HCN4Q9Y3Q4 1203 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 ATRNL1Q5VV63 1379 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 PTPRFP10586 1907 aa8.68□□□□□ -1.02
LSM8-202ENST00000411938 GRM8O00222 908 aa8.67□□□□□ -1.02
LSM8-202ENST00000411938 PEX10O60683 326 aa8.67□□□□□ -1.02
LSM8-202ENST00000411938 ENTPD3O75355 529 aa8.67□□□□□ -1.02
LSM8-202ENST00000411938 CNGA1P29973 690 aa8.67□□□□□ -1.02
LSM8-202ENST00000411938 RGS2P41220 211 aa8.67□□□□□ -1.02
LSM8-202ENST00000411938 TWISTNBQ3B726 338 aaPredicted RBP8.67□□□□□ -1.02
LSM8-202ENST00000411938 SH3BP5LQ7L8J4 393 aa8.67□□□□□ -1.02
LSM8-202ENST00000411938 GPRC5AQ8NFJ5 357 aa8.67□□□□□ -1.02
LSM8-202ENST00000411938 SYNGAP1Q96PV0 1343 aa8.67□□□□□ -1.02
LSM8-202ENST00000411938 CWC22Q9HCG8 908 aaKnown RBP8.67□□□□□ -1.02
LSM8-202ENST00000411938 C9orf78Q9NZ63 289 aaPredicted RBP8.67□□□□□ -1.02
LSM8-202ENST00000411938 DDTLA6NHG4 134 aaPredicted RBP8.66□□□□□ -1.02
LSM8-202ENST00000411938 F6X3S4 739 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 DNM1LO00429 736 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 PDE8BO95263 885 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 LDHBP07195 334 aaKnown RBP8.66□□□□□ -1.02
LSM8-202ENST00000411938 IFIT1P09914 478 aaKnown RBP8.66□□□□□ -1.02
LSM8-202ENST00000411938 DNAJB2P25686 324 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 PRDX5P30044 214 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 MAPK4P31152 587 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 MAP3K10Q02779 954 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 LRRC24Q50LG9 513 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 BEND3Q5T5X7 828 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 MFSD14CQ5VZR4 134 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 FAM9BQ8IZU0 186 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 ZNF280CQ8ND82 737 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 GAS2L1Q99501 681 aaPredicted RBP8.66□□□□□ -1.02
LSM8-202ENST00000411938 APBA2Q99767 749 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 ZNF576Q9H609 170 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 DDX20Q9UHI6 824 aaKnown RBP8.66□□□□□ -1.02
LSM8-202ENST00000411938 CDH23Q9H251 3354 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 PLXNB2O15031 1838 aa8.66□□□□□ -1.02
LSM8-202ENST00000411938 MSCO60682 206 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 MYCNP04198 464 aaPredicted RBP8.65□□□□□ -1.02
LSM8-202ENST00000411938 CCDC85BQ15834 202 aaPredicted RBP8.65□□□□□ -1.02
LSM8-202ENST00000411938 TRIM60Q495X7 471 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 GJC2Q5T442 439 aaPredicted RBP8.65□□□□□ -1.02
LSM8-202ENST00000411938 POTEEQ6S8J3 1075 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 SLC39A5Q6ZMH5 540 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 SH3RF1Q7Z6J0 888 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 PLEKHH3Q7Z736 793 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 LPAR1Q92633 364 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 USP6NLQ92738 828 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 NECAB3Q96P71 396 aaPredicted RBP8.65□□□□□ -1.02
LSM8-202ENST00000411938 P2RX7Q99572 595 aaKnown RBP8.65□□□□□ -1.02
LSM8-202ENST00000411938 ANP32EQ9BTT0 268 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 IDI2Q9BXS1 227 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 TXNRD2Q9NNW7 524 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 PPP4R2Q9NY27 417 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.02
LSM8-202ENST00000411938 MAST2Q6P0Q8 1798 aa8.65□□□□□ -1.02
LSM8-202ENST00000411938 DNAH12Q6ZR08 3092 aa8.65□□□□□ -1.03
LSM8-202ENST00000411938 DOCK1Q14185 1865 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 LTBP2Q14767 1821 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.64□□□□□ -1.03
LSM8-202ENST00000411938 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.64□□□□□ -1.03
LSM8-202ENST00000411938 TRIM43BA6NCK2 446 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 FAM196BA6NMK8 535 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 KBTBD13C9JR72 458 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 MAP2K5Q13163 448 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 PICALMQ13492 652 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 PUM3Q15397 648 aaKnown RBP8.64□□□□□ -1.03
LSM8-202ENST00000411938 MORN1Q5T089 497 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 AKNAD1Q5T1N1 836 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 GPR142Q7Z601 462 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 VGLL2Q8N8G2 317 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 ARRDC4Q8NCT1 418 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 TRIM43Q96BQ3 446 aaPredicted RBP8.64□□□□□ -1.03
LSM8-202ENST00000411938 TIFAQ96CG3 184 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 PAGR1Q9BTK6 254 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 PORCNQ9H237 461 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 PRDM12Q9H4Q4 367 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.64□□□□□ -1.03
LSM8-202ENST00000411938 PDLIM7Q9NR12 457 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms