RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TNRC6CQ9HCJ0 1690 aaKnown RBP15.75■□□□□ 0.11
LIMS1-205ENST00000410093 C10orf71Q711Q0 1435 aa15.75■□□□□ 0.11
LIMS1-205ENST00000410093 IRS2Q9Y4H2 1338 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 POLRMTO00411 1230 aaKnown RBP15.74■□□□□ 0.11
LIMS1-205ENST00000410093 PRKAB2O43741 272 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 ORC4O43929 436 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 DPEP1P16444 411 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 ME1P48163 572 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 DDR1Q08345 913 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 NFIXQ14938 502 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 STK38Q15208 465 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 SAFBQ15424 915 aaKnown RBP eCLIP15.74■□□□□ 0.11
LIMS1-205ENST00000410093 RTN1Q16799 776 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 CCDC178Q5BJE1 867 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 ZNF804AQ7Z570 1209 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 MICU3Q86XE3 530 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 MIGA1Q8NAN2 632 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 ZNF784Q8NCA9 323 aaPredicted RBP15.74■□□□□ 0.11
LIMS1-205ENST00000410093 LINC00301Q8NCQ3 95 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 MRPS27Q92552 414 aaKnown RBP15.74■□□□□ 0.11
LIMS1-205ENST00000410093 RRAGDQ9NQL2 400 aaPredicted RBP15.74■□□□□ 0.11
LIMS1-205ENST00000410093 RBM28Q9NW13 759 aaKnown RBP15.74■□□□□ 0.11
LIMS1-205ENST00000410093 USP25Q9UHP3 1055 aa15.74■□□□□ 0.11
LIMS1-205ENST00000410093 PPP6R2O75170 966 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 NR1I2O75469 434 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 BBOX1O75936 387 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 DEXIO95424 95 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 SERPINB2P05120 415 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 LDHCP07864 332 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 XBP1P17861 261 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 U2AF2P26368 475 aaKnown RBP eCLIP15.73■□□□□ 0.11
LIMS1-205ENST00000410093 CRY2Q49AN0 593 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 RPGRQ92834 1020 aaKnown RBP15.73■□□□□ 0.11
LIMS1-205ENST00000410093 RBM17Q96I25 401 aaKnown RBP15.73■□□□□ 0.11
LIMS1-205ENST00000410093 PIM2Q9P1W9 311 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 MYH6P13533 1939 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 SPTLC2O15270 562 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 ATP2B4P23634 1241 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 MECOMQ03112 1051 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 GNL2Q13823 731 aaKnown RBP15.73■□□□□ 0.11
LIMS1-205ENST00000410093 ANO1Q5XXA6 986 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 NOL10Q9BSC4 688 aaKnown RBP15.73■□□□□ 0.11
LIMS1-205ENST00000410093 TOMM22Q9NS69 142 aa15.73■□□□□ 0.11
LIMS1-205ENST00000410093 MORC2Q9Y6X9 1032 aaPredicted RBP15.73■□□□□ 0.11
LIMS1-205ENST00000410093 BAZ2AQ9UIF9 1905 aaKnown RBP15.72■□□□□ 0.11
LIMS1-205ENST00000410093 GOLGA6L6A8MZA4 724 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 DTNBO60941 627 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 DDAH1O94760 285 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 BAG3O95817 575 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 CDC27P30260 824 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 KRT40Q6A162 431 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 ADGRA1Q86SQ6 560 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 ZNF654Q8IZM8 581 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 FANCBQ8NB91 859 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 ENGASEQ8NFI3 743 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 TDRD7Q8NHU6 1098 aaKnown RBP15.72■□□□□ 0.11
LIMS1-205ENST00000410093 ZSCAN10Q96SZ4 725 aaPredicted RBP15.72■□□□□ 0.11
LIMS1-205ENST00000410093 RNF26Q9BY78 433 aaPredicted RBP15.72■□□□□ 0.11
LIMS1-205ENST00000410093 FOXP1Q9H334 677 aaPredicted RBP15.72■□□□□ 0.11
LIMS1-205ENST00000410093 RTN4Q9NQC3 1192 aaKnown RBP15.72■□□□□ 0.11
LIMS1-205ENST00000410093 FAM217BQ9NTX9 383 aaPredicted RBP15.72■□□□□ 0.11
LIMS1-205ENST00000410093 ANKIB1Q9P2G1 1089 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 IQSEC3Q9UPP2 1182 aaPredicted RBP15.72■□□□□ 0.11
LIMS1-205ENST00000410093 ZKSCAN5Q9Y2L8 839 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 MYH2Q9UKX2 1941 aa15.72■□□□□ 0.11
LIMS1-205ENST00000410093 MINDY4BA8MYZ0 360 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 ZNF500O60304 480 aaPredicted RBP15.71■□□□□ 0.11
LIMS1-205ENST00000410093 CMA1P23946 247 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 HOXA10P31260 410 aaPredicted RBP15.71■□□□□ 0.11
LIMS1-205ENST00000410093 GUCY1B3Q02153 619 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 PDE4BQ07343 736 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 SLC39A14Q15043 492 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 SEC23AQ15436 765 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 RRP12Q5JTH9 1297 aaKnown RBP15.71■□□□□ 0.11
LIMS1-205ENST00000410093 CATIPQ7Z7H3 387 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 SLF2Q8IX21 1173 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 AMOTL1Q8IY63 956 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 TIGD1Q96MW7 591 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.71■□□□□ 0.11
LIMS1-205ENST00000410093 PCDHA7Q9UN72 937 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 MRVI1Q9Y6F6 885 aa15.71■□□□□ 0.11
LIMS1-205ENST00000410093 PTMAP06454 111 aaKnown RBP15.7■□□□□ 0.1
LIMS1-205ENST00000410093 PPP4CP60510 307 aa15.7■□□□□ 0.1
LIMS1-205ENST00000410093 AKAP17AQ02040 695 aaKnown RBP15.7■□□□□ 0.1
LIMS1-205ENST00000410093 SNW1Q13573 536 aaKnown RBP15.7■□□□□ 0.1
LIMS1-205ENST00000410093 STX1AQ16623 288 aa15.7■□□□□ 0.1
LIMS1-205ENST00000410093 DALRD3Q5D0E6 543 aaKnown RBP15.7■□□□□ 0.1
LIMS1-205ENST00000410093 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
LIMS1-205ENST00000410093 ARHGAP27Q6ZUM4 889 aa15.7■□□□□ 0.1
LIMS1-205ENST00000410093 DZIP1Q86YF9 867 aaKnown RBP15.7■□□□□ 0.1
LIMS1-205ENST00000410093 CRACR2BQ8N4Y2 399 aaPredicted RBP15.7■□□□□ 0.1
LIMS1-205ENST00000410093 FSIP1Q8NA03 581 aa15.7■□□□□ 0.1
LIMS1-205ENST00000410093 SDR42E1Q8WUS8 393 aa15.7■□□□□ 0.1
LIMS1-205ENST00000410093 CRAMP1Q96RY5 1269 aa15.7■□□□□ 0.1
LIMS1-205ENST00000410093 NAT10Q9H0A0 1025 aaKnown RBP15.7■□□□□ 0.1
LIMS1-205ENST00000410093 PODXL2Q9NZ53 605 aa15.7■□□□□ 0.1
LIMS1-205ENST00000410093 TNKSO95271 1327 aa15.7■□□□□ 0.1
LIMS1-205ENST00000410093 KLRG2A4D1S0 409 aaPredicted RBP15.69■□□□□ 0.1
LIMS1-205ENST00000410093 ADCY5O95622 1261 aa15.69■□□□□ 0.1
LIMS1-205ENST00000410093 LDHBP07195 334 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms