RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 TBX2Q13207 712 aaPredicted RBP19.16■□□□□ 0.66
LIMS2-208ENST00000410011 FBXO38Q6PIJ6 1188 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 TRIM65Q6PJ69 517 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 KRT222Q8N1A0 295 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 ENOX1Q8TC92 643 aaKnown RBP19.16■□□□□ 0.66
LIMS2-208ENST00000410011 NACAP1Q9BZK3 213 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 FANCLQ9NW38 375 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 FBXO2Q9UK22 296 aaPredicted RBP19.16■□□□□ 0.66
LIMS2-208ENST00000410011 ITGB4P16144 1822 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 NUP98P52948 1817 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 ARHGAP6O43182 974 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 ZSCAN12O43309 604 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 MBD4O95243 580 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 BMP6P22004 513 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 MAGEB6Q8N7X4 407 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 SLC4A9Q96Q91 983 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 FAM193AP78312 1265 aa19.15■□□□□ 0.66
LIMS2-208ENST00000410011 RASGRF1Q13972 1273 aa19.15■□□□□ 0.66
LIMS2-208ENST00000410011 DIS3L2Q8IYB7 885 aaKnown RBP19.15■□□□□ 0.66
LIMS2-208ENST00000410011 CEP131Q9UPN4 1083 aa19.15■□□□□ 0.66
LIMS2-208ENST00000410011 TACC3Q9Y6A5 838 aa19.15■□□□□ 0.66
LIMS2-208ENST00000410011 GOLGA6L9A6NEM1 432 aa19.14■□□□□ 0.66
LIMS2-208ENST00000410011 BTBD18B2RXH4 712 aa19.14■□□□□ 0.66
LIMS2-208ENST00000410011 ZNF18P17022 549 aa19.14■□□□□ 0.66
LIMS2-208ENST00000410011 POSTNQ15063 836 aa19.14■□□□□ 0.66
LIMS2-208ENST00000410011 RTN1Q16799 776 aa19.14■□□□□ 0.66
LIMS2-208ENST00000410011 REXO1L1PQ8IX06 675 aa19.14■□□□□ 0.66
LIMS2-208ENST00000410011 CRACR2BQ8N4Y2 399 aaPredicted RBP19.14■□□□□ 0.66
LIMS2-208ENST00000410011 SPATA20Q8TB22 786 aa19.14■□□□□ 0.66
LIMS2-208ENST00000410011 RNF41Q9H4P4 317 aaPredicted RBP19.14■□□□□ 0.66
LIMS2-208ENST00000410011 SRPRBQ9Y5M8 271 aaKnown RBP19.14■□□□□ 0.66
LIMS2-208ENST00000410011 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.14■□□□□ 0.66
LIMS2-208ENST00000410011 CHD4Q14839 1912 aa19.14■□□□□ 0.65
LIMS2-208ENST00000410011 CTDSPL2Q05D32 466 aa19.14■□□□□ 0.65
LIMS2-208ENST00000410011 TMEM139Q8IV31 216 aa19.14■□□□□ 0.65
LIMS2-208ENST00000410011 MYL10Q9BUA6 226 aa19.14■□□□□ 0.65
LIMS2-208ENST00000410011 MAN1B1Q9UKM7 699 aa19.14■□□□□ 0.65
LIMS2-208ENST00000410011 ZBTB1Q9Y2K1 713 aa19.14■□□□□ 0.65
LIMS2-208ENST00000410011 MORC3Q14149 939 aa19.13■□□□□ 0.65
LIMS2-208ENST00000410011 WTAPQ15007 396 aa19.13■□□□□ 0.65
LIMS2-208ENST00000410011 HOMER1Q86YM7 354 aa19.13■□□□□ 0.65
LIMS2-208ENST00000410011 INCENPQ9NQS7 918 aa19.13■□□□□ 0.65
LIMS2-208ENST00000410011 DISP2A7MBM2 1401 aa19.13■□□□□ 0.65
LIMS2-208ENST00000410011 STX10O60499 249 aa19.13■□□□□ 0.65
LIMS2-208ENST00000410011 DZIP3Q86Y13 1208 aaKnown RBP19.13■□□□□ 0.65
LIMS2-208ENST00000410011 ARMT1Q9H993 441 aa19.13■□□□□ 0.65
LIMS2-208ENST00000410011 INTS13Q9NVM9 706 aa19.13■□□□□ 0.65
LIMS2-208ENST00000410011 ERICH2A1L162 156 aa19.12■□□□□ 0.65
LIMS2-208ENST00000410011 GUCY1A2P33402 732 aa19.12■□□□□ 0.65
LIMS2-208ENST00000410011 PDE4BQ07343 736 aa19.12■□□□□ 0.65
LIMS2-208ENST00000410011 RTL9Q8NET4 1388 aa19.12■□□□□ 0.65
LIMS2-208ENST00000410011 ERCC5P28715 1186 aaPredicted RBP19.12■□□□□ 0.65
LIMS2-208ENST00000410011 FANCBQ8NB91 859 aa19.12■□□□□ 0.65
LIMS2-208ENST00000410011 MPHOSPH8Q99549 860 aa19.12■□□□□ 0.65
LIMS2-208ENST00000410011 UTP14AQ9BVJ6 771 aaKnown RBP19.12■□□□□ 0.65
LIMS2-208ENST00000410011 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.12■□□□□ 0.65
LIMS2-208ENST00000410011 ANAPC4Q9UJX5 808 aa19.12■□□□□ 0.65
LIMS2-208ENST00000410011 V9GYY5 206 aaPredicted RBP19.12■□□□□ 0.65
LIMS2-208ENST00000410011 BCORQ6W2J9 1755 aa19.11■□□□□ 0.65
LIMS2-208ENST00000410011 ERCC6LQ2NKX8 1250 aa19.11■□□□□ 0.65
LIMS2-208ENST00000410011 SMARCE1Q969G3 411 aa19.11■□□□□ 0.65
LIMS2-208ENST00000410011 UBE2Q2LH0YL09 131 aa19.11■□□□□ 0.65
LIMS2-208ENST00000410011 TPM1P09493 284 aa19.11■□□□□ 0.65
LIMS2-208ENST00000410011 BMS1Q14692 1282 aaKnown RBP19.11■□□□□ 0.65
LIMS2-208ENST00000410011 NUTM2AQ8IVF1 878 aaPredicted RBP19.11■□□□□ 0.65
LIMS2-208ENST00000410011 RNF26Q9BY78 433 aaPredicted RBP19.11■□□□□ 0.65
LIMS2-208ENST00000410011 DNAI1Q9UI46 699 aa19.11■□□□□ 0.65
LIMS2-208ENST00000410011 TMEM232C9JQI7 657 aa19.1■□□□□ 0.65
LIMS2-208ENST00000410011 POLR2DO15514 142 aaKnown RBP19.1■□□□□ 0.65
LIMS2-208ENST00000410011 SPECC1LQ69YQ0 1117 aa19.1■□□□□ 0.65
LIMS2-208ENST00000410011 CREBRFQ8IUR6 639 aa19.1■□□□□ 0.65
LIMS2-208ENST00000410011 HELBQ8NG08 1087 aaPredicted RBP19.1■□□□□ 0.65
LIMS2-208ENST00000410011 CCDC34Q96HJ3 373 aa19.1■□□□□ 0.65
LIMS2-208ENST00000410011 SLC4A4Q9Y6R1 1079 aa19.1■□□□□ 0.65
LIMS2-208ENST00000410011 FOXN1O15353 648 aa19.09■□□□□ 0.65
LIMS2-208ENST00000410011 ACTN4O43707 911 aaKnown RBP19.09■□□□□ 0.65
LIMS2-208ENST00000410011 TDO2P48775 406 aa19.09■□□□□ 0.65
LIMS2-208ENST00000410011 BAG1Q99933 345 aaPredicted RBP19.09■□□□□ 0.65
LIMS2-208ENST00000410011 SERTAD1Q9UHV2 236 aa19.09■□□□□ 0.65
LIMS2-208ENST00000410011 PPP2R2CQ9Y2T4 447 aa19.09■□□□□ 0.65
LIMS2-208ENST00000410011 SLFN14P0C7P3 912 aa19.09■□□□□ 0.65
LIMS2-208ENST00000410011 LCORLQ8N3X6 602 aa19.09■□□□□ 0.65
LIMS2-208ENST00000410011 ZNF446Q9NWS9 450 aa19.09■□□□□ 0.65
LIMS2-208ENST00000410011 AATFQ9NY61 560 aaKnown RBP eCLIP19.09■□□□□ 0.65
LIMS2-208ENST00000410011 KCNJ14Q9UNX9 436 aa19.09■□□□□ 0.65
LIMS2-208ENST00000410011 NFE2L3Q9Y4A8 694 aa19.09■□□□□ 0.65
LIMS2-208ENST00000410011 VWA3AA6NCI4 1184 aa19.08■□□□□ 0.65
LIMS2-208ENST00000410011 EFCAB8A8MWE9 144 aa19.08■□□□□ 0.65
LIMS2-208ENST00000410011 EIF5P55010 431 aaKnown RBP19.08■□□□□ 0.65
LIMS2-208ENST00000410011 ZNF654Q8IZM8 581 aa19.08■□□□□ 0.65
LIMS2-208ENST00000410011 PCDHB6Q9Y5E3 794 aa19.08■□□□□ 0.65
LIMS2-208ENST00000410011 PRKAB2O43741 272 aa19.08■□□□□ 0.64
LIMS2-208ENST00000410011 BMP15O95972 392 aa19.08■□□□□ 0.64
LIMS2-208ENST00000410011 NR1I3Q14994 352 aa19.08■□□□□ 0.64
LIMS2-208ENST00000410011 SEC23AQ15436 765 aa19.08■□□□□ 0.64
LIMS2-208ENST00000410011 TC2NQ8N9U0 490 aa19.08■□□□□ 0.64
LIMS2-208ENST00000410011 BCL11BQ9C0K0 894 aaPredicted RBP19.08■□□□□ 0.64
LIMS2-208ENST00000410011 SLIT2O94813 1529 aa19.08■□□□□ 0.64
LIMS2-208ENST00000410011 XBP1P17861 261 aa19.07■□□□□ 0.64
LIMS2-208ENST00000410011 PLCD1P51178 756 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms