RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TTF1Q15361 905 aaPredicted RBP21.54■■□□□ 1.04
LSM5-204ENST00000409909 FBXO46Q6PJ61 603 aaPredicted RBP21.54■■□□□ 1.04
LSM5-204ENST00000409909 OTOP1Q7RTM1 612 aa21.54■■□□□ 1.04
LSM5-204ENST00000409909 ANKRD23Q86SG2 305 aa21.54■■□□□ 1.04
LSM5-204ENST00000409909 CCDC84Q86UT8 332 aaPredicted RBP21.54■■□□□ 1.04
LSM5-204ENST00000409909 EDC3Q96F86 508 aaKnown RBP21.54■■□□□ 1.04
LSM5-204ENST00000409909 ERO1AQ96HE7 468 aa21.54■■□□□ 1.04
LSM5-204ENST00000409909 DNAJC2Q99543 621 aaKnown RBP21.54■■□□□ 1.04
LSM5-204ENST00000409909 DHX36Q9H2U1 1008 aaKnown RBP21.54■■□□□ 1.04
LSM5-204ENST00000409909 DCTPP1Q9H773 170 aa21.54■■□□□ 1.04
LSM5-204ENST00000409909 PI4KBQ9UBF8 816 aa21.54■■□□□ 1.04
LSM5-204ENST00000409909 PALD1Q9ULE6 856 aa21.54■■□□□ 1.04
LSM5-204ENST00000409909 TRIM17Q9Y577 477 aa21.54■■□□□ 1.04
LSM5-204ENST00000409909 PHIPQ8WWQ0 1821 aa21.54■■□□□ 1.04
LSM5-204ENST00000409909 PDHXO00330 501 aa21.53■■□□□ 1.04
LSM5-204ENST00000409909 TLR2O60603 784 aa21.53■■□□□ 1.04
LSM5-204ENST00000409909 ATP5JP18859 108 aa21.53■■□□□ 1.04
LSM5-204ENST00000409909 GPAT2Q6NUI2 795 aa21.53■■□□□ 1.04
LSM5-204ENST00000409909 SAP30BPQ9UHR5 308 aaKnown RBP21.53■■□□□ 1.04
LSM5-204ENST00000409909 HERC5Q9UII4 1024 aaKnown RBP21.53■■□□□ 1.04
LSM5-204ENST00000409909 PCDHB15Q9Y5E8 787 aa21.53■■□□□ 1.04
LSM5-204ENST00000409909 A0A0G2JLL6 359 aaPredicted RBP21.52■■□□□ 1.04
LSM5-204ENST00000409909 PDE6AP16499 860 aa21.52■■□□□ 1.04
LSM5-204ENST00000409909 SLC9C2Q5TAH2 1124 aa21.52■■□□□ 1.04
LSM5-204ENST00000409909 TMED8Q6PL24 325 aaPredicted RBP21.52■■□□□ 1.04
LSM5-204ENST00000409909 PRRT2Q7Z6L0 340 aaPredicted RBP21.52■■□□□ 1.04
LSM5-204ENST00000409909 METTL16Q86W50 562 aaKnown RBP21.52■■□□□ 1.04
LSM5-204ENST00000409909 BOLA2Q9H3K6 86 aa21.52■■□□□ 1.04
LSM5-204ENST00000409909 DNAJC18Q9H819 358 aa21.52■■□□□ 1.04
LSM5-204ENST00000409909 CAP2P40123 477 aa21.51■■□□□ 1.03
LSM5-204ENST00000409909 RIOK1Q9BRS2 568 aaKnown RBP21.51■■□□□ 1.03
LSM5-204ENST00000409909 TCRBV5S4A2TA0A5A2 114 aa21.5■■□□□ 1.03
LSM5-204ENST00000409909 TRIM75PA6NK02 468 aa21.5■■□□□ 1.03
LSM5-204ENST00000409909 RGS19P49795 217 aa21.5■■□□□ 1.03
LSM5-204ENST00000409909 SLC4A8Q2Y0W8 1093 aa21.5■■□□□ 1.03
LSM5-204ENST00000409909 FOXP4Q8IVH2 680 aaPredicted RBP21.5■■□□□ 1.03
LSM5-204ENST00000409909 HAUS7Q99871 368 aa21.5■■□□□ 1.03
LSM5-204ENST00000409909 PAG1Q9NWQ8 432 aa21.5■■□□□ 1.03
LSM5-204ENST00000409909 PTPRFP10586 1907 aa21.5■■□□□ 1.03
LSM5-204ENST00000409909 JAG1P78504 1218 aa21.49■■□□□ 1.03
LSM5-204ENST00000409909 C17orf99Q6UX52 265 aa21.49■■□□□ 1.03
LSM5-204ENST00000409909 CERS3Q8IU89 383 aa21.49■■□□□ 1.03
LSM5-204ENST00000409909 EFCC1Q9HA90 598 aa21.49■■□□□ 1.03
LSM5-204ENST00000409909 ATAD5Q96QE3 1844 aa21.49■■□□□ 1.03
LSM5-204ENST00000409909 ADGRA2Q96PE1 1338 aa21.49■■□□□ 1.03
LSM5-204ENST00000409909 ZNF532Q9HCE3 1301 aa21.49■■□□□ 1.03
LSM5-204ENST00000409909 MAGEB6P1A0A0J9YX57 407 aa21.48■■□□□ 1.03
LSM5-204ENST00000409909 USP5P45974 858 aa21.48■■□□□ 1.03
LSM5-204ENST00000409909 SLFNL1Q499Z3 407 aa21.48■■□□□ 1.03
LSM5-204ENST00000409909 FASTKD5Q7L8L6 764 aaKnown RBP21.48■■□□□ 1.03
LSM5-204ENST00000409909 ARHGAP39Q9C0H5 1083 aa21.48■■□□□ 1.03
LSM5-204ENST00000409909 CPA4Q9UI42 421 aa21.48■■□□□ 1.03
LSM5-204ENST00000409909 PTPN22Q9Y2R2 807 aa21.48■■□□□ 1.03
LSM5-204ENST00000409909 MYH1P12882 1939 aa21.48■■□□□ 1.03
LSM5-204ENST00000409909 TNRC18O15417 2968 aaPredicted RBP21.48■■□□□ 1.03
LSM5-204ENST00000409909 CYP2C8P10632 490 aa21.47■■□□□ 1.03
LSM5-204ENST00000409909 SOX10P56693 466 aa21.47■■□□□ 1.03
LSM5-204ENST00000409909 SPP2Q13103 211 aa21.47■■□□□ 1.03
LSM5-204ENST00000409909 SHROOM1Q2M3G4 852 aaPredicted RBP21.47■■□□□ 1.03
LSM5-204ENST00000409909 GADL1Q6ZQY3 521 aa21.47■■□□□ 1.03
LSM5-204ENST00000409909 CRACR2BQ8N4Y2 399 aaPredicted RBP21.47■■□□□ 1.03
LSM5-204ENST00000409909 CRBNQ96SW2 442 aa21.47■■□□□ 1.03
LSM5-204ENST00000409909 ZSWIM8A7E2V4 1837 aa21.46■■□□□ 1.03
LSM5-204ENST00000409909 CHGBP05060 677 aa21.46■■□□□ 1.03
LSM5-204ENST00000409909 LACTBP83111 547 aaPredicted RBP21.46■■□□□ 1.03
LSM5-204ENST00000409909 USP17L5A8MUK1 530 aa21.45■■□□□ 1.02
LSM5-204ENST00000409909 HLA-DOAP06340 250 aa21.45■■□□□ 1.02
LSM5-204ENST00000409909 ZNF280CQ8ND82 737 aa21.45■■□□□ 1.02
LSM5-204ENST00000409909 ECHDC1Q9NTX5 307 aa21.45■■□□□ 1.02
LSM5-204ENST00000409909 CTGFP29279 349 aa21.44■■□□□ 1.02
LSM5-204ENST00000409909 ADD2P35612 726 aa21.44■■□□□ 1.02
LSM5-204ENST00000409909 TREML2Q5T2D2 321 aa21.44■■□□□ 1.02
LSM5-204ENST00000409909 LCORLQ8N3X6 602 aa21.44■■□□□ 1.02
LSM5-204ENST00000409909 PARK7Q99497 189 aaKnown RBP21.44■■□□□ 1.02
LSM5-204ENST00000409909 TRIM34Q9BYJ4 488 aa21.44■■□□□ 1.02
LSM5-204ENST00000409909 SLC45A1Q9Y2W3 748 aa21.44■■□□□ 1.02
LSM5-204ENST00000409909 GDF11O95390 407 aa21.43■■□□□ 1.02
LSM5-204ENST00000409909 ASNSP08243 561 aa21.43■■□□□ 1.02
LSM5-204ENST00000409909 PLCD1P51178 756 aa21.43■■□□□ 1.02
LSM5-204ENST00000409909 TSHZ3Q63HK5 1081 aa21.43■■□□□ 1.02
LSM5-204ENST00000409909 TBC1D2Q9BYX2 928 aa21.43■■□□□ 1.02
LSM5-204ENST00000409909 CRNKL1Q9BZJ0 848 aaKnown RBP21.43■■□□□ 1.02
LSM5-204ENST00000409909 AGTPBP1Q9UPW5 1226 aa21.43■■□□□ 1.02
LSM5-204ENST00000409909 BRCA2P51587 3418 aa21.43■■□□□ 1.02
LSM5-204ENST00000409909 ECM2O94769 699 aaPredicted RBP21.42■■□□□ 1.02
LSM5-204ENST00000409909 BCRP11274 1271 aa21.42■■□□□ 1.02
LSM5-204ENST00000409909 HMGCS2P54868 508 aa21.42■■□□□ 1.02
LSM5-204ENST00000409909 EVX2Q03828 476 aa21.42■■□□□ 1.02
LSM5-204ENST00000409909 ARHGEF6Q15052 776 aa21.42■■□□□ 1.02
LSM5-204ENST00000409909 DDX60LQ5H9U9 1706 aaKnown RBP21.42■■□□□ 1.02
LSM5-204ENST00000409909 TATDN1Q6P1N9 297 aa21.42■■□□□ 1.02
LSM5-204ENST00000409909 WDR18Q9BV38 432 aa21.42■■□□□ 1.02
LSM5-204ENST00000409909 EHD4Q9H223 541 aa21.42■■□□□ 1.02
LSM5-204ENST00000409909 ARMT1Q9H993 441 aa21.42■■□□□ 1.02
LSM5-204ENST00000409909 SERPINB13Q9UIV8 391 aa21.42■■□□□ 1.02
LSM5-204ENST00000409909 MLLT1Q03111 559 aaPredicted RBP21.41■■□□□ 1.02
LSM5-204ENST00000409909 KIF22Q14807 665 aa21.41■■□□□ 1.02
LSM5-204ENST00000409909 TTC6Q86TZ1 520 aa21.41■■□□□ 1.02
LSM5-204ENST00000409909 PROCA1Q8NCQ7 364 aaPredicted RBP21.41■■□□□ 1.02
LSM5-204ENST00000409909 SDR42E1Q8WUS8 393 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms