RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 AIDAQ96BJ3 306 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 TCEANC2Q96MN5 208 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 A0A1B0GUL6 1792 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 XRCC6P12956 609 aaKnown RBP eCLIP8.81□□□□□ -1
CXCR4-202ENST00000409817 RFC4P35249 363 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 UBE2HP62256 183 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 KRT85P78386 507 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 ZSCAN23Q3MJ62 389 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 STRBPQ96SI9 672 aaKnown RBP8.81□□□□□ -1
CXCR4-202ENST00000409817 NBPF3Q9H094 633 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 ZSCAN16Q9H4T2 348 aaPredicted RBP8.81□□□□□ -1
CXCR4-202ENST00000409817 ELP1O95163 1332 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 VPS37CA5D8V6 355 aaPredicted RBP8.8□□□□□ -1
CXCR4-202ENST00000409817 PATL2C9JE40 543 aaKnown RBP8.8□□□□□ -1
CXCR4-202ENST00000409817 RNF40O75150 1001 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 LETM1O95202 739 aaPredicted RBP8.8□□□□□ -1
CXCR4-202ENST00000409817 RPS8P62241 208 aaKnown RBP8.8□□□□□ -1
CXCR4-202ENST00000409817 SCRN1Q12765 414 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 COL9A3Q14050 684 aaPredicted RBP8.8□□□□□ -1
CXCR4-202ENST00000409817 TTLL5Q6EMB2 1281 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 NAA16Q6N069 864 aaPredicted RBP8.8□□□□□ -1
CXCR4-202ENST00000409817 FAM196AQ6ZSG2 479 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 PTF1AQ7RTS3 328 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 USP48Q86UV5 1035 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 MB21D2Q8IYB1 491 aaPredicted RBP8.8□□□□□ -1
CXCR4-202ENST00000409817 FAM184AQ8NB25 1140 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 CALR3Q96L12 384 aaKnown RBP8.8□□□□□ -1
CXCR4-202ENST00000409817 MTA3Q9BTC8 594 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 NACAP1Q9BZK3 213 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 PRM3Q9NNZ6 103 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 WWC3Q9ULE0 1092 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 DENND2AQ9ULE3 1009 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 MINPP1Q9UNW1 487 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 CASZ1Q86V15 1759 aa8.8□□□□□ -1
CXCR4-202ENST00000409817 TK2O00142 265 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 BCAMP50895 628 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 STK3Q13188 491 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 GRIPAP1Q4V328 841 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 MORN1Q5T089 497 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 BICDL1Q6ZP65 573 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 MAGEB6Q8N7X4 407 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 TSC1Q92574 1164 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 SCAND2PQ9GZW5 306 aaPredicted RBP8.79□□□□□ -1
CXCR4-202ENST00000409817 CNNM2Q9H8M5 875 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 C4AP0C0L4 1744 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 PRC1O43663 620 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 APPP05067 770 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 PDIA3P30101 505 aaKnown RBP8.79□□□□□ -1
CXCR4-202ENST00000409817 PUS10Q3MIT2 529 aaKnown RBP8.79□□□□□ -1
CXCR4-202ENST00000409817 ATL3Q6DD88 541 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 VPS37DQ86XT2 251 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 NSUN7Q8NE18 718 aaKnown RBP8.79□□□□□ -1
CXCR4-202ENST00000409817 TMEM87BQ96K49 555 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 HS3ST6Q96QI5 342 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 NAPBQ9H115 298 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 LRP2BPQ9P2M1 347 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 SRP68Q9UHB9 627 aaKnown RBP8.79□□□□□ -1
CXCR4-202ENST00000409817 CNPY2Q9Y2B0 182 aa8.79□□□□□ -1
CXCR4-202ENST00000409817 TCHHQ07283 1943 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 SALL1Q9NSC2 1324 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 MYO5AQ9Y4I1 1855 aaKnown RBP8.78□□□□□ -1
CXCR4-202ENST00000409817 H3BQV1 296 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 KCNQ4P56696 695 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 APOBRQ0VD83 1088 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 IFFO2Q5TF58 517 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 LRSAM1Q6UWE0 723 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 FBXO33Q7Z6M2 555 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 IFNL3Q8IZI9 196 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 PRR7Q8TB68 274 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 ANP32BQ92688 251 aaKnown RBP8.78□□□□□ -1
CXCR4-202ENST00000409817 CELF1Q92879 486 aaKnown RBP8.78□□□□□ -1
CXCR4-202ENST00000409817 QTRT2Q9H974 415 aaKnown RBP8.78□□□□□ -1
CXCR4-202ENST00000409817 TMEM63CQ9P1W3 806 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 TIAM2Q8IVF5 1701 aa8.78□□□□□ -1
CXCR4-202ENST00000409817 PTPDC1A2A3K4 754 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 HRO43593 1189 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 MBD4O95243 580 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 HAND2P61296 217 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 DNM1Q05193 864 aaKnown RBP8.77□□□□□ -1.01
CXCR4-202ENST00000409817 CDC37L1Q7L3B6 337 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 GAS2L3Q86XJ1 694 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 LRRC2Q9BYS8 371 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 KRT23Q9C075 422 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 RNF41Q9H4P4 317 aaPredicted RBP8.77□□□□□ -1.01
CXCR4-202ENST00000409817 CFAP45Q9UL16 551 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 ANGEL1Q9UNK9 670 aaKnown RBP8.77□□□□□ -1.01
CXCR4-202ENST00000409817 SLC27A5Q9Y2P5 690 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 SNAP23O00161 211 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 NPHP1O15259 732 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 FIBPO43427 364 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 ACTN4O43707 911 aaKnown RBP8.77□□□□□ -1.01
CXCR4-202ENST00000409817 JAK2O60674 1132 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 CDKL5O76039 1030 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 PCP11498 1178 aaKnown RBP8.77□□□□□ -1.01
CXCR4-202ENST00000409817 LIFRP42702 1097 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 NT5C2P49902 561 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 CCDC183Q5T5S1 534 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 GIMAP6Q6P9H5 292 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 ADGRD1Q6QNK2 874 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 CNBD1Q8NA66 436 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms