RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 WDHD1O75717 1129 aaPredicted RBP14.65□□□□□ -0.06
CHMP3-204ENST00000409727 VIL1P09327 827 aaKnown RBP14.65□□□□□ -0.06
CHMP3-204ENST00000409727 PDIA3P30101 505 aaKnown RBP14.65□□□□□ -0.06
CHMP3-204ENST00000409727 CXCL9Q07325 125 aa14.65□□□□□ -0.06
CHMP3-204ENST00000409727 PDE4BQ07343 736 aa14.65□□□□□ -0.06
CHMP3-204ENST00000409727 CFAP100Q494V2 611 aa14.65□□□□□ -0.06
CHMP3-204ENST00000409727 FAM47AQ5JRC9 791 aa14.65□□□□□ -0.06
CHMP3-204ENST00000409727 SLC44A5Q8NCS7 719 aa14.65□□□□□ -0.06
CHMP3-204ENST00000409727 IGDCC4Q8TDY8 1250 aa14.65□□□□□ -0.06
CHMP3-204ENST00000409727 TMEM87BQ96K49 555 aa14.65□□□□□ -0.06
CHMP3-204ENST00000409727 SERPINA10Q9UK55 444 aa14.65□□□□□ -0.06
CHMP3-204ENST00000409727 PPFIA3O75145 1194 aa14.64□□□□□ -0.07
CHMP3-204ENST00000409727 RXRAP19793 462 aa14.64□□□□□ -0.07
CHMP3-204ENST00000409727 GJB2P29033 226 aa14.64□□□□□ -0.07
CHMP3-204ENST00000409727 CACNB1Q02641 598 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-204ENST00000409727 TCP10Q12799 353 aa14.64□□□□□ -0.07
CHMP3-204ENST00000409727 NFIAQ12857 509 aa14.64□□□□□ -0.07
CHMP3-204ENST00000409727 UBAC1Q9BSL1 405 aa14.64□□□□□ -0.07
CHMP3-204ENST00000409727 LY9Q9HBG7 655 aa14.64□□□□□ -0.07
CHMP3-204ENST00000409727 ERICH2A1L162 156 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 PFKFB2O60825 505 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
CHMP3-204ENST00000409727 PRELPP51888 382 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 SART3Q15020 963 aaKnown RBP14.63□□□□□ -0.07
CHMP3-204ENST00000409727 ARHGAP27Q6ZUM4 889 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 FBXL16Q8N461 479 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 MYL10Q9BUA6 226 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 MKNK2Q9HBH9 465 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.63□□□□□ -0.07
CHMP3-204ENST00000409727 MYO3BQ8WXR4 1341 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 JAK2O60674 1132 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 HDLBPQ00341 1268 aaKnown RBP14.63□□□□□ -0.07
CHMP3-204ENST00000409727 WTAPQ15007 396 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 RAB3GAP1Q15042 981 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 CIAPIN1Q6FI81 312 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 CCDC144CPQ8IYA2 1237 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 OGFOD1Q8N543 542 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 ZNF274Q96GC6 653 aaPredicted RBP14.63□□□□□ -0.07
CHMP3-204ENST00000409727 MRIQ9BWK5 157 aa14.63□□□□□ -0.07
CHMP3-204ENST00000409727 TDRD3Q9H7E2 651 aaKnown RBP14.63□□□□□ -0.07
CHMP3-204ENST00000409727 PSME4Q14997 1843 aa14.62□□□□□ -0.07
CHMP3-204ENST00000409727 UTRNP46939 3433 aa14.62□□□□□ -0.07
CHMP3-204ENST00000409727 CCDC69A6NI79 296 aa14.62□□□□□ -0.07
CHMP3-204ENST00000409727 TSPY2A6NKD2 308 aa14.62□□□□□ -0.07
CHMP3-204ENST00000409727 NMT2O60551 498 aa14.62□□□□□ -0.07
CHMP3-204ENST00000409727 FGRP09769 529 aa14.62□□□□□ -0.07
CHMP3-204ENST00000409727 PCP11498 1178 aaKnown RBP14.62□□□□□ -0.07
CHMP3-204ENST00000409727 MICU3Q86XE3 530 aa14.62□□□□□ -0.07
CHMP3-204ENST00000409727 TNPO1Q92973 898 aaKnown RBP14.62□□□□□ -0.07
CHMP3-204ENST00000409727 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
CHMP3-204ENST00000409727 PRMT6Q96LA8 375 aaPredicted RBP14.62□□□□□ -0.07
CHMP3-204ENST00000409727 SYT17Q9BSW7 474 aa14.62□□□□□ -0.07
CHMP3-204ENST00000409727 HDAC9Q9UKV0 1011 aa14.62□□□□□ -0.07
CHMP3-204ENST00000409727 TNKSO95271 1327 aa14.62□□□□□ -0.07
CHMP3-204ENST00000409727 ORC4O43929 436 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 NUCB2P80303 420 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 ZFPM1Q8IX07 1006 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 ZSCAN10Q96SZ4 725 aaPredicted RBP14.61□□□□□ -0.07
CHMP3-204ENST00000409727 GMLQ99445 158 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 OSBPL5Q9H0X9 879 aaPredicted RBP14.61□□□□□ -0.07
CHMP3-204ENST00000409727 HPS5Q9UPZ3 1129 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 SLC12A7Q9Y666 1083 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 LTBP3Q9NS15 1303 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 MYH1P12882 1939 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 ROBO3Q96MS0 1386 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 FOCADQ5VW36 1801 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 ARFGEF1Q9Y6D6 1849 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 SHTN1A0MZ66 631 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 EVCP57679 992 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 TFAP4Q01664 338 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 NFKBIBQ15653 356 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 APOA5Q6Q788 366 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 IQCA1Q86XH1 822 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 ZDHHC9Q9Y397 364 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 GJA3Q9Y6H8 435 aa14.61□□□□□ -0.07
CHMP3-204ENST00000409727 DDX60LQ5H9U9 1706 aaKnown RBP14.61□□□□□ -0.07
CHMP3-204ENST00000409727 CLRN2A0PK11 232 aa14.6□□□□□ -0.07
CHMP3-204ENST00000409727 LIFRP42702 1097 aa14.6□□□□□ -0.07
CHMP3-204ENST00000409727 CDK8P49336 464 aa14.6□□□□□ -0.07
CHMP3-204ENST00000409727 METAP2P50579 478 aaKnown RBP eCLIP14.6□□□□□ -0.07
CHMP3-204ENST00000409727 TNIP1Q15025 636 aa14.6□□□□□ -0.07
CHMP3-204ENST00000409727 DLGAP5Q15398 846 aa14.6□□□□□ -0.07
CHMP3-204ENST00000409727 ZNF444Q8N0Y2 327 aaPredicted RBP14.6□□□□□ -0.07
CHMP3-204ENST00000409727 ENAHQ8N8S7 591 aaPredicted RBP14.6□□□□□ -0.07
CHMP3-204ENST00000409727 ECM29Q5VYK3 1845 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 ZBTB43O43298 467 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 CTDNEP1O95476 244 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 EIF6P56537 245 aaKnown RBP14.59□□□□□ -0.07
CHMP3-204ENST00000409727 SYNE3Q6ZMZ3 975 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 C16orf86Q6ZW13 317 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 TTC6Q86TZ1 520 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 SGMS1Q86VZ5 419 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 ZSCAN29Q8IWY8 852 aaPredicted RBP14.59□□□□□ -0.07
CHMP3-204ENST00000409727 NSUN7Q8NE18 718 aaKnown RBP14.59□□□□□ -0.07
CHMP3-204ENST00000409727 AGBL3Q8NEM8 1001 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 PTPDC1A2A3K4 754 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 CPLX1O14810 134 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
CHMP3-204ENST00000409727 TSPY3P0CV98 308 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms