RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SEL1L2Q5TEA6 688 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 SLITRK6Q9H5Y7 841 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 RTL1A6NKG5 1358 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 KIAA1841Q6NSI8 718 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 DENND2AQ9ULE3 1009 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 WDR97A6NE52 1622 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 SLC12A1Q13621 1099 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 ZNF569Q5MCW4 686 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 CCDC141Q6ZP82 1450 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 STAMQ92783 540 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 PLEKHG3A1L390 1219 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 SYNDIG1LA6NDD5 238 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 KRT33BQ14525 404 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 POMGNT1Q8WZA1 660 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 ALKBH8Q96BT7 664 aaKnown RBP9.39□□□□□ -0.91
SCN9A-203ENST00000409672 CTAGE9A4FU28 777 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 STK10O94804 968 aaKnown RBP9.39□□□□□ -0.91
SCN9A-203ENST00000409672 FBXW4P57775 412 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 NKX1-1Q15270 411 aaPredicted RBP9.39□□□□□ -0.91
SCN9A-203ENST00000409672 FTOQ9C0B1 505 aaKnown RBP eCLIP9.39□□□□□ -0.91
SCN9A-203ENST00000409672 EHBP1L1Q8N3D4 1523 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 SYT1P21579 422 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 DACT3Q96B18 629 aaPredicted RBP9.39□□□□□ -0.91
SCN9A-203ENST00000409672 ORAI2Q96SN7 254 aa9.39□□□□□ -0.91
SCN9A-203ENST00000409672 NKTRP30414 1462 aaKnown RBP9.39□□□□□ -0.91
SCN9A-203ENST00000409672 CASP2P42575 452 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 CCDC157Q569K6 752 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 USP48Q86UV5 1035 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 MARK3P27448 753 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 HPDP32754 393 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-203ENST00000409672 HACE1Q8IYU2 909 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 KIAA1524Q8TCG1 905 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 PHKBQ93100 1093 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 RPS6KC1Q96S38 1066 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 A0A1B0GVL5 298 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 TACC1O75410 805 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 GCP02774 474 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 KAZNQ674X7 775 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 RTEL1Q9NZ71 1219 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 TROQ12816 1431 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-203ENST00000409672 IL1RL1Q01638 556 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 NOC4LQ9BVI4 516 aaKnown RBP9.38□□□□□ -0.91
SCN9A-203ENST00000409672 PCDH11XQ9BZA7 1347 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 PCDH11YQ9BZA8 1340 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 RNF113AO15541 343 aaKnown RBP9.38□□□□□ -0.91
SCN9A-203ENST00000409672 ZFYP08048 801 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-203ENST00000409672 CYP2J2P51589 502 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 KSR2Q6VAB6 950 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 CCDC77Q9BR77 488 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 DDX19AQ9NUU7 478 aaKnown RBP9.38□□□□□ -0.91
SCN9A-203ENST00000409672 SLC5A4Q9NY91 659 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 CCDC122Q5T0U0 273 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 ZNF467Q7Z7K2 595 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-203ENST00000409672 ITM2BQ9Y287 266 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 V9GY48 417 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-203ENST00000409672 KRT81Q14533 505 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 NXNQ6DKJ4 435 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 MTRQ99707 1265 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 PLCH2O75038 1416 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 A0A1B0GUL7 405 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 VIMP08670 466 aaKnown RBP9.38□□□□□ -0.91
SCN9A-203ENST00000409672 XPAP23025 273 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-203ENST00000409672 EIF4A2Q14240 407 aaKnown RBP9.38□□□□□ -0.91
SCN9A-203ENST00000409672 TTC22Q5TAA0 569 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 NLRX1Q86UT6 975 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 PLB1Q6P1J6 1458 aa9.38□□□□□ -0.91
SCN9A-203ENST00000409672 ALDH1B1P30837 517 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 POLKQ9UBT6 870 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 GNAT2P19087 354 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 CALCRLQ16602 461 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 UBN1Q9NPG3 1134 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 WDR46O15213 610 aaKnown RBP9.37□□□□□ -0.91
SCN9A-203ENST00000409672 NOL3O60936 208 aaKnown RBP9.37□□□□□ -0.91
SCN9A-203ENST00000409672 MGARPQ8TDB4 240 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 TMX3Q96JJ7 454 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 LMCD1Q9NZU5 365 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 HMG20BQ9P0W2 317 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 FLOT1O75955 427 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 SH2D4BQ5SQS7 431 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 MIGA2Q7L4E1 593 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 NCOA5Q9HCD5 579 aaKnown RBP9.37□□□□□ -0.91
SCN9A-203ENST00000409672 RAD17O75943 681 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 RXRBP28702 533 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 CTAGE1Q96RT6 745 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 PARP2Q9UGN5 583 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 DYNC1I1O14576 645 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 POLR2DO15514 142 aaKnown RBP9.37□□□□□ -0.91
SCN9A-203ENST00000409672 DLATP10515 647 aaKnown RBP9.37□□□□□ -0.91
SCN9A-203ENST00000409672 PRPHP41219 470 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 ZNF654Q8IZM8 581 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 DACT1Q9NYF0 836 aa9.37□□□□□ -0.91
SCN9A-203ENST00000409672 CALUO43852 315 aaPredicted RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 TBC1D8O95759 1140 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 NME8Q8N427 588 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 ZNF513Q8N8E2 541 aaPredicted RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 DEPTORQ8TB45 409 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 SCYL1Q96KG9 808 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 RSPH14Q9UHP6 348 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 FANCAO15360 1455 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 BICDL2A1A5D9 508 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms