RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 KRT26Q7Z3Y9 468 aa15.48■□□□□ 0.07
LIMS2-203ENST00000409254 STAG1Q8WVM7 1258 aa15.48■□□□□ 0.07
LIMS2-203ENST00000409254 TEPSINQ96N21 525 aa15.48■□□□□ 0.07
LIMS2-203ENST00000409254 CSRNP1Q96S65 589 aa15.48■□□□□ 0.07
LIMS2-203ENST00000409254 GINM1Q9NU53 330 aa15.48■□□□□ 0.07
LIMS2-203ENST00000409254 PLIN4Q96Q06 1357 aa15.48■□□□□ 0.07
LIMS2-203ENST00000409254 PTPRFP10586 1907 aa15.47■□□□□ 0.07
LIMS2-203ENST00000409254 ORC4O43929 436 aa15.47■□□□□ 0.07
LIMS2-203ENST00000409254 PDE4BQ07343 736 aa15.47■□□□□ 0.07
LIMS2-203ENST00000409254 EAPPQ56P03 285 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-203ENST00000409254 PHIPQ8WWQ0 1821 aa15.47■□□□□ 0.07
LIMS2-203ENST00000409254 ASTN2O75129 1339 aaPredicted RBP15.46■□□□□ 0.07
LIMS2-203ENST00000409254 CYP21A2P08686 494 aa15.46■□□□□ 0.07
LIMS2-203ENST00000409254 HMGB1P09429 215 aaKnown RBP15.46■□□□□ 0.07
LIMS2-203ENST00000409254 NF2P35240 595 aa15.46■□□□□ 0.07
LIMS2-203ENST00000409254 CACNB3P54284 484 aa15.46■□□□□ 0.07
LIMS2-203ENST00000409254 C1QTNF8P60827 252 aa15.46■□□□□ 0.07
LIMS2-203ENST00000409254 CREB3L3Q68CJ9 461 aa15.46■□□□□ 0.07
LIMS2-203ENST00000409254 CHADLQ6NUI6 762 aa15.46■□□□□ 0.07
LIMS2-203ENST00000409254 ZSCAN29Q8IWY8 852 aaPredicted RBP15.46■□□□□ 0.07
LIMS2-203ENST00000409254 MTA3Q9BTC8 594 aa15.46■□□□□ 0.07
LIMS2-203ENST00000409254 TMEM39BQ9GZU3 492 aa15.46■□□□□ 0.07
LIMS2-203ENST00000409254 WDR19Q8NEZ3 1342 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 SSC5DA1L4H1 1573 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 DDTLA6NHG4 134 aaPredicted RBP15.45■□□□□ 0.06
LIMS2-203ENST00000409254 SLC27A2O14975 620 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 FKBP1BP68106 108 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 TCP10Q12799 353 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 PPP4R3BQ5MIZ7 849 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 AKNAD1Q5T1N1 836 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 SH3BP5LQ7L8J4 393 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 RBM46Q8TBY0 533 aaKnown RBP15.45■□□□□ 0.06
LIMS2-203ENST00000409254 CCDC17Q96LX7 622 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 TBC1D32Q96NH3 1257 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 TM6SF1Q9BZW5 370 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 PALD1Q9ULE6 856 aa15.45■□□□□ 0.06
LIMS2-203ENST00000409254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.45■□□□□ 0.06
LIMS2-203ENST00000409254 KIF3CO14782 793 aa15.44■□□□□ 0.06
LIMS2-203ENST00000409254 SEC24BO95487 1268 aa15.44■□□□□ 0.06
LIMS2-203ENST00000409254 TRDNQ13061 729 aa15.44■□□□□ 0.06
LIMS2-203ENST00000409254 TATDN1Q6P1N9 297 aa15.44■□□□□ 0.06
LIMS2-203ENST00000409254 TRIM34Q9BYJ4 488 aa15.44■□□□□ 0.06
LIMS2-203ENST00000409254 KRT23Q9C075 422 aa15.44■□□□□ 0.06
LIMS2-203ENST00000409254 TOMM70O94826 608 aa15.43■□□□□ 0.06
LIMS2-203ENST00000409254 PSMA5P28066 241 aa15.43■□□□□ 0.06
LIMS2-203ENST00000409254 PLCD1P51178 756 aa15.43■□□□□ 0.06
LIMS2-203ENST00000409254 FSTL1Q12841 308 aa15.43■□□□□ 0.06
LIMS2-203ENST00000409254 MAP3K11Q16584 847 aa15.43■□□□□ 0.06
LIMS2-203ENST00000409254 MFSD6Q6ZSS7 791 aa15.43■□□□□ 0.06
LIMS2-203ENST00000409254 CRACR2BQ8N4Y2 399 aaPredicted RBP15.43■□□□□ 0.06
LIMS2-203ENST00000409254 SMC1BQ8NDV3 1235 aa15.43■□□□□ 0.06
LIMS2-203ENST00000409254 C22orf23Q9BZE7 217 aa15.43■□□□□ 0.06
LIMS2-203ENST00000409254 NBPF3Q9H094 633 aa15.43■□□□□ 0.06
LIMS2-203ENST00000409254 SAP30BPQ9UHR5 308 aaKnown RBP15.43■□□□□ 0.06
LIMS2-203ENST00000409254 MINDY4BA8MYZ0 360 aa15.42■□□□□ 0.06
LIMS2-203ENST00000409254 PPP1R12BO60237 982 aaPredicted RBP15.42■□□□□ 0.06
LIMS2-203ENST00000409254 CCDC178Q5BJE1 867 aa15.42■□□□□ 0.06
LIMS2-203ENST00000409254 ZFPM1Q8IX07 1006 aa15.42■□□□□ 0.06
LIMS2-203ENST00000409254 NCOA7Q8NI08 942 aa15.42■□□□□ 0.06
LIMS2-203ENST00000409254 ZNF526Q8TF50 670 aaPredicted RBP15.42■□□□□ 0.06
LIMS2-203ENST00000409254 ESR2Q92731 530 aa15.42■□□□□ 0.06
LIMS2-203ENST00000409254 CDCA5Q96FF9 252 aa15.42■□□□□ 0.06
LIMS2-203ENST00000409254 ZNF341Q9BYN7 854 aa15.42■□□□□ 0.06
LIMS2-203ENST00000409254 TBC1D2Q9BYX2 928 aa15.42■□□□□ 0.06
LIMS2-203ENST00000409254 ZNF112Q9UJU3 913 aa15.42■□□□□ 0.06
LIMS2-203ENST00000409254 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
LIMS2-203ENST00000409254 E7EWF7 191 aa15.41■□□□□ 0.06
LIMS2-203ENST00000409254 CDK8P49336 464 aa15.41■□□□□ 0.06
LIMS2-203ENST00000409254 IFFO2Q5TF58 517 aa15.41■□□□□ 0.06
LIMS2-203ENST00000409254 RALYLQ86SE5 291 aaKnown RBP15.41■□□□□ 0.06
LIMS2-203ENST00000409254 TBC1D10CQ8IV04 446 aa15.41■□□□□ 0.06
LIMS2-203ENST00000409254 FBXL16Q8N461 479 aa15.41■□□□□ 0.06
LIMS2-203ENST00000409254 DNAJC18Q9H819 358 aa15.41■□□□□ 0.06
LIMS2-203ENST00000409254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.41■□□□□ 0.06
LIMS2-203ENST00000409254 SYNPO2Q9UMS6 1093 aa15.41■□□□□ 0.06
LIMS2-203ENST00000409254 SNX14Q9Y5W7 946 aa15.41■□□□□ 0.06
LIMS2-203ENST00000409254 ADM5C9JUS6 153 aa15.4■□□□□ 0.06
LIMS2-203ENST00000409254 POTEIP0CG38 1075 aa15.4■□□□□ 0.06
LIMS2-203ENST00000409254 POTEJP0CG39 1038 aa15.4■□□□□ 0.06
LIMS2-203ENST00000409254 SHMT1P34896 483 aa15.4■□□□□ 0.06
LIMS2-203ENST00000409254 HAND2P61296 217 aa15.4■□□□□ 0.06
LIMS2-203ENST00000409254 NOL9Q5SY16 702 aaKnown RBP15.4■□□□□ 0.06
LIMS2-203ENST00000409254 NBPF12Q5TAG4 269 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-203ENST00000409254 GLIS2Q9BZE0 524 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-203ENST00000409254 MKNK2Q9HBH9 465 aa15.4■□□□□ 0.06
LIMS2-203ENST00000409254 CYP2D7A0A087X1C5 515 aa15.39■□□□□ 0.05
LIMS2-203ENST00000409254 CTNND1O60716 968 aaKnown RBP15.39■□□□□ 0.05
LIMS2-203ENST00000409254 ITGBL1O95965 494 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-203ENST00000409254 ASNSP08243 561 aa15.39■□□□□ 0.05
LIMS2-203ENST00000409254 CYP2D6P10635 497 aa15.39■□□□□ 0.05
LIMS2-203ENST00000409254 RASA1P20936 1047 aa15.39■□□□□ 0.05
LIMS2-203ENST00000409254 IREB2P48200 963 aaKnown RBP15.39■□□□□ 0.05
LIMS2-203ENST00000409254 MAP1SQ66K74 1059 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-203ENST00000409254 TMEM179Q6ZVK1 233 aa15.39■□□□□ 0.05
LIMS2-203ENST00000409254 USP48Q86UV5 1035 aa15.39■□□□□ 0.05
LIMS2-203ENST00000409254 TCP11L1Q9NUJ3 509 aa15.39■□□□□ 0.05
LIMS2-203ENST00000409254 NEDD4P46934 1319 aa15.39■□□□□ 0.05
LIMS2-203ENST00000409254 PASKQ96RG2 1323 aa15.39■□□□□ 0.05
LIMS2-203ENST00000409254 LOC285556D6RIA3 1793 aa15.39■□□□□ 0.05
LIMS2-203ENST00000409254 PHF20L1A8MW92 1017 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms