RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 HOOK2Q96ED9 719 aa11.8□□□□□ -0.52
NIF3L1-202ENST00000409020 ANTXR1Q9H6X2 564 aa11.8□□□□□ -0.52
NIF3L1-202ENST00000409020 AATFQ9NY61 560 aaKnown RBP eCLIP11.8□□□□□ -0.52
NIF3L1-202ENST00000409020 MYO5AQ9Y4I1 1855 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-202ENST00000409020 AACSQ86V21 672 aa11.79□□□□□ -0.52
NIF3L1-202ENST00000409020 SLF2Q8IX21 1173 aa11.79□□□□□ -0.52
NIF3L1-202ENST00000409020 RANBP2P49792 3224 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-202ENST00000409020 AK9Q5TCS8 1911 aa11.79□□□□□ -0.52
NIF3L1-202ENST00000409020 ECM2O94769 699 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 GSTO1P78417 241 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 PPATQ06203 517 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 SNAPC2Q13487 334 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 RRP1BQ14684 758 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 TAF1CQ15572 869 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 NOL9Q5SY16 702 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 NAA16Q6N069 864 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 OTOP1Q7RTM1 612 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 TEX11Q8IYF3 940 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 RHPN1Q8TCX5 695 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 ZNF512BQ96KM6 892 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 DDX19BQ9UMR2 479 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 TRIM17Q9Y577 477 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 MAST2Q6P0Q8 1798 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 CETPP11597 493 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 DYNLL1P63167 89 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 MAP3K10Q02779 954 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 OTUD7BQ6GQQ9 843 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 ARHGAP39Q9C0H5 1083 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 OSBPL5Q9H0X9 879 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 KCNH4Q9UQ05 1017 aa11.78□□□□□ -0.52
NIF3L1-202ENST00000409020 ZSWIM8A7E2V4 1837 aa11.77□□□□□ -0.52
NIF3L1-202ENST00000409020 MS4A1P11836 297 aa11.77□□□□□ -0.53
NIF3L1-202ENST00000409020 PTPRAP18433 802 aa11.77□□□□□ -0.53
NIF3L1-202ENST00000409020 RGS19P49795 217 aa11.77□□□□□ -0.53
NIF3L1-202ENST00000409020 SP3Q02447 781 aa11.77□□□□□ -0.53
NIF3L1-202ENST00000409020 SHROOM1Q2M3G4 852 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-202ENST00000409020 SLC4A8Q2Y0W8 1093 aa11.77□□□□□ -0.53
NIF3L1-202ENST00000409020 MAPKAPK5Q8IW41 473 aa11.77□□□□□ -0.53
NIF3L1-202ENST00000409020 SCYL3Q8IZE3 742 aa11.77□□□□□ -0.53
NIF3L1-202ENST00000409020 FLT1P17948 1338 aa11.76□□□□□ -0.53
NIF3L1-202ENST00000409020 SIPA1L1O43166 1804 aa11.76□□□□□ -0.53
NIF3L1-202ENST00000409020 IDH1O75874 414 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-202ENST00000409020 LDHCP07864 332 aa11.76□□□□□ -0.53
NIF3L1-202ENST00000409020 GPAT2Q6NUI2 795 aa11.76□□□□□ -0.53
NIF3L1-202ENST00000409020 FBXO46Q6PJ61 603 aaPredicted RBP11.76□□□□□ -0.53
NIF3L1-202ENST00000409020 MIGA1Q8NAN2 632 aa11.76□□□□□ -0.53
NIF3L1-202ENST00000409020 TGFBRAP1Q8WUH2 860 aa11.76□□□□□ -0.53
NIF3L1-202ENST00000409020 ZFYVE28Q9HCC9 887 aa11.76□□□□□ -0.53
NIF3L1-202ENST00000409020 ZHX2Q9Y6X8 837 aa11.76□□□□□ -0.53
NIF3L1-202ENST00000409020 PDHXO00330 501 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 CTGFP29279 349 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 JAG1P78504 1218 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 PKN2Q16513 984 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 ERC1Q8IUD2 1116 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 RPAP2Q8IXW5 612 aaPredicted RBP11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 MAGEB6Q8N7X4 407 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 EDC3Q96F86 508 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 DNAJC18Q9H819 358 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 CPA4Q9UI42 421 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 AFG3L2Q9Y4W6 797 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 TRIM75PA6NK02 468 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 TLR2O60603 784 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 CYP2C8P10632 490 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 CYP7A1P22680 504 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 PPP4CP60510 307 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 SLFNL1Q499Z3 407 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 ERO1AQ96HE7 468 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 CHMP4BQ9H444 224 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 EFCC1Q9HA90 598 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 PICK1Q9NRD5 415 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 SAP30BPQ9UHR5 308 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 BRPF3Q9ULD4 1205 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 PTPN22Q9Y2R2 807 aa11.75□□□□□ -0.53
NIF3L1-202ENST00000409020 ADGRA2Q96PE1 1338 aa11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 COL2A1P02458 1487 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 A0A0G2JLL6 359 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 SMARCA5O60264 1052 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 TBC1D12O60347 775 aa11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 CHGBP05060 677 aa11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 MLLT1Q03111 559 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 EVX2Q03828 476 aa11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 PDE3AQ14432 1141 aa11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 PRRT2Q7Z6L0 340 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 ANKRD23Q86SG2 305 aa11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 KIF1BPQ96EK5 621 aa11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 PALD1Q9ULE6 856 aa11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
NIF3L1-202ENST00000409020 DOCK1Q14185 1865 aa11.73□□□□□ -0.53
NIF3L1-202ENST00000409020 CDK5RAP2Q96SN8 1893 aa11.73□□□□□ -0.53
NIF3L1-202ENST00000409020 SZT2Q5T011 3432 aa11.73□□□□□ -0.53
NIF3L1-202ENST00000409020 CTNND1O60716 968 aaKnown RBP11.73□□□□□ -0.53
NIF3L1-202ENST00000409020 BAG3O95817 575 aa11.73□□□□□ -0.53
NIF3L1-202ENST00000409020 C17orf99Q6UX52 265 aa11.73□□□□□ -0.53
NIF3L1-202ENST00000409020 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
NIF3L1-202ENST00000409020 IPO9Q96P70 1041 aaKnown RBP11.73□□□□□ -0.53
NIF3L1-202ENST00000409020 DNAJC2Q99543 621 aaKnown RBP11.73□□□□□ -0.53
NIF3L1-202ENST00000409020 DNAH12Q6ZR08 3092 aa11.73□□□□□ -0.53
NIF3L1-202ENST00000409020 GOLIM4O00461 696 aa11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 CXCL11O14625 94 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms