RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 P3H4Q92791 437 aa11.96□□□□□ -0.49
LTBP1-204ENST00000407925 RNF34Q969K3 372 aa11.96□□□□□ -0.49
LTBP1-204ENST00000407925 GPHNQ9NQX3 736 aaPredicted RBP11.96□□□□□ -0.49
LTBP1-204ENST00000407925 SH3TC1Q8TE82 1336 aa11.96□□□□□ -0.49
LTBP1-204ENST00000407925 IRX4P78413 519 aa11.96□□□□□ -0.49
LTBP1-204ENST00000407925 PLBD2Q8NHP8 589 aa11.96□□□□□ -0.49
LTBP1-204ENST00000407925 A0A1B0GUL7 405 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 SMIM23A6NLE4 172 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 I3L4J1 428 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 PPFIA1Q13136 1202 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 NPATQ14207 1427 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 JARID2Q92833 1246 aaPredicted RBP11.96□□□□□ -0.5
LTBP1-204ENST00000407925 RASSF4Q9H2L5 321 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 ZBTB40Q9NUA8 1239 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 NOD1Q9Y239 953 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 PPFIA4O75335 1185 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 RASSF2P50749 326 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 ATP2A3Q93084 1043 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 CLSTN2Q9H4D0 955 aa11.96□□□□□ -0.5
LTBP1-204ENST00000407925 SYNRGQ9UMZ2 1314 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 LAMC3Q9Y6N6 1575 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 DUOX2Q9NRD8 1548 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 HIBADHP31937 336 aaKnown RBP11.95□□□□□ -0.5
LTBP1-204ENST00000407925 PLEKHM2Q8IWE5 1019 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 MIGA1Q8NAN2 632 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 USP26Q9BXU7 913 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 MIS12Q9H081 205 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 NT5C3AQ9H0P0 336 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 C19orf44Q9H6X5 657 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.95□□□□□ -0.5
LTBP1-204ENST00000407925 IVNS1ABPQ9Y6Y0 642 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 EIF2AK4Q9P2K8 1649 aaKnown RBP11.95□□□□□ -0.5
LTBP1-204ENST00000407925 NDUFAB1O14561 156 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 SLC39A6Q13433 755 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 RASA3Q14644 834 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 CEP85LQ5SZL2 805 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 NCAPGQ9BPX3 1015 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 DNM3Q9UQ16 869 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 CC2D2AQ9P2K1 1620 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 CCDC169A6NNP5 214 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 MAPK8IP2Q13387 824 aaPredicted RBP11.95□□□□□ -0.5
LTBP1-204ENST00000407925 MTHFSDQ2M296 383 aaKnown RBP11.95□□□□□ -0.5
LTBP1-204ENST00000407925 MCUR1Q96AQ8 359 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 TFCP2L1Q9NZI6 479 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 CTNND2Q9UQB3 1225 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
LTBP1-204ENST00000407925 PARD3Q8TEW0 1356 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 TRAPPC3LQ5T215 181 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 MIPOL1Q8TD10 442 aa11.95□□□□□ -0.5
LTBP1-204ENST00000407925 PA2G4Q9UQ80 394 aaKnown RBP11.95□□□□□ -0.5
LTBP1-204ENST00000407925 GOLGA6CA6NDK9 693 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 GOLGA6BA6NDN3 693 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 H0YCG3 227 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 ZBED4O75132 1171 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 GOLGA6DP0CG33 693 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 ADCY7P51828 1080 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 CFAP221Q4G0U5 840 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 TTC38Q5R3I4 469 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 HHATQ5VTY9 493 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 TBC1D22AQ8WUA7 517 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 RAB17Q9H0T7 212 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 AZI2Q9H6S1 392 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 GOLGA6AQ9NYA3 693 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 ZHX1Q9UKY1 873 aaPredicted RBP11.94□□□□□ -0.5
LTBP1-204ENST00000407925 ZNF174Q15697 407 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 GKAP1Q5VSY0 366 aaPredicted RBP11.94□□□□□ -0.5
LTBP1-204ENST00000407925 CNBD1Q8NA66 436 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 ZBTB21Q9ULJ3 1066 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 NOP56O00567 594 aaKnown RBP11.94□□□□□ -0.5
LTBP1-204ENST00000407925 PDE8AO60658 829 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 PPP1R21Q6ZMI0 780 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 LRRC59Q96AG4 307 aaKnown RBP11.94□□□□□ -0.5
LTBP1-204ENST00000407925 VCX3AQ9NNX9 186 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 LRWD1Q9UFC0 647 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 RIMS2Q9UQ26 1411 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 MAGEA1P43355 309 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 SARNPP82979 210 aaKnown RBP11.94□□□□□ -0.5
LTBP1-204ENST00000407925 UAP1Q16222 522 aaPredicted RBP11.94□□□□□ -0.5
LTBP1-204ENST00000407925 DCUN1D2Q6PH85 259 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 GSDMBQ8TAX9 411 aa11.94□□□□□ -0.5
LTBP1-204ENST00000407925 RNMTO43148 476 aaKnown RBP11.93□□□□□ -0.5
LTBP1-204ENST00000407925 CTTNBP2NLQ9P2B4 639 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 KDM3AQ9Y4C1 1321 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 TRIM37O94972 964 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 NLRP12P59046 1061 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 VSIG1Q86XK7 387 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 NFATC2IPQ8NCF5 419 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 TTC16Q8NEE8 873 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 GOLGA5Q8TBA6 731 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 IP6K1Q92551 441 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 ASIC3Q9UHC3 531 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 METTL22Q9BUU2 404 aaPredicted RBP11.93□□□□□ -0.5
LTBP1-204ENST00000407925 TRIM6Q9C030 488 aaPredicted RBP11.93□□□□□ -0.5
LTBP1-204ENST00000407925 GGA1Q9UJY5 639 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 PCK1P35558 622 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 FANCCQ00597 558 aa11.93□□□□□ -0.5
LTBP1-204ENST00000407925 GABPB1Q06547 395 aaPredicted RBP11.93□□□□□ -0.5
LTBP1-204ENST00000407925 DIS3L2Q8IYB7 885 aaKnown RBP11.93□□□□□ -0.5
LTBP1-204ENST00000407925 CEP120Q8N960 986 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms