RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 MCMDC2Q4G0Z9 681 aa15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 GORABQ5T7V8 394 aa15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 STRIP1Q5VSL9 837 aa15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 FBXO33Q7Z6M2 555 aa15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 NBPF11Q86T75 865 aa15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 SLC17A8Q8NDX2 589 aa15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 IL25Q9H293 177 aa15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 DBNLQ9UJU6 430 aaKnown RBP15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 SLC27A2O14975 620 aa15.22■□□□□ 0.03
SMARCB1-203ENST00000407082 LETM1O95202 739 aaPredicted RBP15.22■□□□□ 0.03
SMARCB1-203ENST00000407082 DLGAP5Q15398 846 aa15.22■□□□□ 0.03
SMARCB1-203ENST00000407082 CCDC158Q5M9N0 1113 aa15.22■□□□□ 0.03
SMARCB1-203ENST00000407082 NOL8Q76FK4 1167 aaKnown RBP15.22■□□□□ 0.03
SMARCB1-203ENST00000407082 KBTBD3Q8NAB2 608 aa15.22■□□□□ 0.03
SMARCB1-203ENST00000407082 CD209Q9NNX6 404 aa15.22■□□□□ 0.03
SMARCB1-203ENST00000407082 ZFYP08048 801 aaPredicted RBP15.21■□□□□ 0.03
SMARCB1-203ENST00000407082 ZSCAN22P10073 491 aaPredicted RBP15.21■□□□□ 0.03
SMARCB1-203ENST00000407082 GTF2IP78347 998 aa15.21■□□□□ 0.03
SMARCB1-203ENST00000407082 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
SMARCB1-203ENST00000407082 FAM227BQ96M60 508 aa15.21■□□□□ 0.03
SMARCB1-203ENST00000407082 TLR7Q9NYK1 1049 aaKnown RBP15.21■□□□□ 0.03
SMARCB1-203ENST00000407082 PSME4Q14997 1843 aa15.21■□□□□ 0.03
SMARCB1-203ENST00000407082 STX6O43752 255 aa15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 IL1R1P14778 569 aa15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 PHKA1P46020 1223 aa15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 ARHGEF6Q15052 776 aa15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 CCDC102BQ68D86 513 aa15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 DPF3Q92784 378 aa15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 ZNF333Q96JL9 665 aa15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 DBNDD2Q9BQY9 259 aa15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 GNL3LQ9NVN8 582 aaKnown RBP15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 IQSEC3Q9UPP2 1182 aaPredicted RBP15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 PTCH2Q9Y6C5 1203 aa15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 RPAP1Q9BWH6 1393 aaPredicted RBP15.2■□□□□ 0.02
SMARCB1-203ENST00000407082 A0A0D9SFI3 127 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 CLRN2A0PK11 232 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 RPS6KB1P23443 525 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 IREB2P48200 963 aaKnown RBP15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 CAP1Q01518 475 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 CCDC173Q0VFZ6 552 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 PKP1Q13835 747 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 SUPT20HL1Q3ZLR7 823 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 CAVIN1Q6NZI2 390 aaKnown RBP15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 TMEM87AQ8NBN3 555 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 TDRD7Q8NHU6 1098 aaKnown RBP15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 TRIM44Q96DX7 344 aaPredicted RBP15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 DNAJC2Q99543 621 aaKnown RBP15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 PTPN18Q99952 460 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 DSCC1Q9BVC3 393 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 VEZTQ9HBM0 779 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 PAG1Q9NWQ8 432 aa15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 MKI67P46013 3256 aaKnown RBP15.19■□□□□ 0.02
SMARCB1-203ENST00000407082 F8W031 263 aaPredicted RBP15.18■□□□□ 0.02
SMARCB1-203ENST00000407082 ECM2O94769 699 aaPredicted RBP15.18■□□□□ 0.02
SMARCB1-203ENST00000407082 GJA5P36382 358 aa15.18■□□□□ 0.02
SMARCB1-203ENST00000407082 MMP14P50281 582 aa15.18■□□□□ 0.02
SMARCB1-203ENST00000407082 ZSCAN23Q3MJ62 389 aa15.18■□□□□ 0.02
SMARCB1-203ENST00000407082 TTC39AQ5SRH9 613 aa15.18■□□□□ 0.02
SMARCB1-203ENST00000407082 OTUD5Q96G74 571 aa15.18■□□□□ 0.02
SMARCB1-203ENST00000407082 KIF3AQ9Y496 699 aa15.18■□□□□ 0.02
SMARCB1-203ENST00000407082 MYO1BO43795 1136 aa15.17■□□□□ 0.02
SMARCB1-203ENST00000407082 MAP3K11Q16584 847 aa15.17■□□□□ 0.02
SMARCB1-203ENST00000407082 NBPF12Q5TAG4 269 aaPredicted RBP15.17■□□□□ 0.02
SMARCB1-203ENST00000407082 ZSCAN25Q6NSZ9 544 aa15.17■□□□□ 0.02
SMARCB1-203ENST00000407082 SH3TC2Q8TF17 1288 aa15.17■□□□□ 0.02
SMARCB1-203ENST00000407082 NEK1Q96PY6 1258 aa15.17■□□□□ 0.02
SMARCB1-203ENST00000407082 ELP3Q9H9T3 547 aa15.17■□□□□ 0.02
SMARCB1-203ENST00000407082 CTNNA3Q9UI47 895 aa15.17■□□□□ 0.02
SMARCB1-203ENST00000407082 PCDHAC2Q9Y5I4 1007 aa15.17■□□□□ 0.02
SMARCB1-203ENST00000407082 RBBP6Q7Z6E9 1792 aaKnown RBP15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 F13A1P00488 732 aa15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 UQCRFS1P1P0C7P4 283 aa15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 SYT1P21579 422 aa15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 GJB2P29033 226 aa15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 NASPP49321 788 aaPredicted RBP15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 CHAF1AQ13111 956 aaPredicted RBP15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 TAF1CQ15572 869 aaPredicted RBP15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 LRSAM1Q6UWE0 723 aa15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 CCDC83Q8IWF9 413 aa15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 ANKRD13AQ8IZ07 590 aa15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 ZBED3Q96IU2 234 aaPredicted RBP15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 ZFYVE28Q9HCC9 887 aa15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 RBM27Q9P2N5 1060 aaKnown RBP15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 JAG2Q9Y219 1238 aa15.16■□□□□ 0.02
SMARCB1-203ENST00000407082 ARAP2Q8WZ64 1704 aa15.15■□□□□ 0.02
SMARCB1-203ENST00000407082 SEMA3EO15041 775 aa15.15■□□□□ 0.02
SMARCB1-203ENST00000407082 RNF113AO15541 343 aaKnown RBP15.15■□□□□ 0.02
SMARCB1-203ENST00000407082 USP2O75604 605 aaPredicted RBP15.15■□□□□ 0.02
SMARCB1-203ENST00000407082 ARID4AP29374 1257 aaPredicted RBP15.15■□□□□ 0.02
SMARCB1-203ENST00000407082 RASGRF1Q13972 1273 aa15.15■□□□□ 0.02
SMARCB1-203ENST00000407082 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
SMARCB1-203ENST00000407082 OPTNQ96CV9 577 aa15.15■□□□□ 0.02
SMARCB1-203ENST00000407082 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
SMARCB1-203ENST00000407082 PPP2R3BQ9Y5P8 575 aa15.15■□□□□ 0.02
SMARCB1-203ENST00000407082 UBE2HP62256 183 aa15.14■□□□□ 0.01
SMARCB1-203ENST00000407082 KIF22Q14807 665 aa15.14■□□□□ 0.01
SMARCB1-203ENST00000407082 TTF1Q15361 905 aaPredicted RBP15.14■□□□□ 0.01
SMARCB1-203ENST00000407082 CFAP100Q494V2 611 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms