RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
HMGB3P19-201ENST00000403971 RNF214Q8ND24 703 aa7.81□□□□□ -1.16
HMGB3P19-201ENST00000403971 FAM46AQ96IP4 442 aaKnown RBP7.81□□□□□ -1.16
HMGB3P19-201ENST00000403971 SEC16BQ96JE7 1060 aa7.81□□□□□ -1.16
HMGB3P19-201ENST00000403971 SPATA32Q96LK8 384 aa7.81□□□□□ -1.16
HMGB3P19-201ENST00000403971 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.81□□□□□ -1.16
HMGB3P19-201ENST00000403971 CEP41Q9BYV8 373 aa7.81□□□□□ -1.16
HMGB3P19-201ENST00000403971 ATXN3LQ9H3M9 355 aa7.81□□□□□ -1.16
HMGB3P19-201ENST00000403971 GSX1Q9H4S2 264 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P19-201ENST00000403971 PPP1R1BQ9UD71 204 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P19-201ENST00000403971 GAS2O43903 313 aaKnown RBP7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 RNGTTO60942 597 aaKnown RBP7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 HTR3BO95264 441 aa7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 RAB6AP20340 208 aa7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 ZNF165P49910 485 aa7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 ETF1P62495 437 aaKnown RBP7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 KCNMA1Q12791 1236 aa7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 FBXW10Q5XX13 1052 aa7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 ISL2Q96A47 359 aa7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 WNT10AQ9GZT5 417 aa7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 ANTXR1Q9H6X2 564 aa7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 FBRSQ9HAH7 460 aa7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 NACADO15069 1562 aa7.8□□□□□ -1.16
HMGB3P19-201ENST00000403971 IGSF3O75054 1194 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 PGRP06401 933 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 PLCG1P19174 1290 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 COL9A2Q14055 689 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 SGO2Q562F6 1265 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 DZIP1LQ8IYY4 767 aaKnown RBP7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 REXO1Q8N1G1 1221 aaKnown RBP7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 ARMC10Q8N2F6 343 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 FBLIM1Q8WUP2 373 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 FERD3LQ96RJ6 166 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 EHMT1Q9H9B1 1298 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 PIDD1Q9HB75 910 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 LGR6Q9HBX8 967 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 USP35Q9P2H5 1018 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 REV1Q9UBZ9 1251 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 MRVI1Q9Y6F6 885 aa7.79□□□□□ -1.16
HMGB3P19-201ENST00000403971 PRR36Q9H6K5 1346 aa7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 FANCGO15287 622 aa7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 DNAJA2O60884 412 aa7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 ITGB2P05107 769 aa7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 USP11P51784 963 aa7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 CPLX3Q8WVH0 158 aa7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 DHX38Q92620 1227 aaKnown RBP7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 UTP4Q969X6 686 aaKnown RBP7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 SRRTQ9BXP5 876 aaKnown RBP7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 ZNRF3Q9ULT6 936 aa7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 TACC3Q9Y6A5 838 aa7.78□□□□□ -1.16
HMGB3P19-201ENST00000403971 ATE1O95260 518 aa7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 SSBP05455 408 aaKnown RBP eCLIP7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 BMP3P12645 472 aa7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 PDE4BQ07343 736 aa7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 SF3A1Q15459 793 aaKnown RBP7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 NKG7Q16617 165 aa7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 SMYD4Q8IYR2 804 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 ACSF2Q96CM8 615 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 ANAPC16Q96DE5 110 aa7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 DRC1Q96MC2 740 aa7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 SSBP4Q9BWG4 385 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 ACSS3Q9H6R3 686 aa7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 TJP2Q9UDY2 1190 aa7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 KLHL3Q9UH77 587 aa7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 DAGLAQ9Y4D2 1042 aa7.77□□□□□ -1.17
HMGB3P19-201ENST00000403971 UPK3BL1B0FP48 263 aa7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 UPK3BL2E5RIL1 263 aa7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 GDF11O95390 407 aa7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 NFICP08651 508 aa7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 ATP2B1P20020 1258 aa7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 GTF2F1P35269 517 aaKnown RBP eCLIP7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 ZNF507Q8TCN5 953 aa7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 SHDQ96IW2 340 aa7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 MYRFLQ96LU7 910 aa7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 DPH2Q9BQC3 489 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 SEMA6CQ9H3T2 930 aa7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 SSU72Q9NP77 194 aaKnown RBP7.76□□□□□ -1.17
HMGB3P19-201ENST00000403971 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 CHURC1-FNTBB4DL54 471 aa7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 DYNC1LI2O43237 492 aaPredicted RBP7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 MAP4P27816 1152 aaKnown RBP7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 RXRBP28702 533 aa7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 ETFBP38117 255 aa7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 GATA4P43694 442 aa7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 SLBPQ14493 270 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 PLA2G4EQ3MJ16 856 aa7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 TMEM201Q5SNT2 666 aa7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 FAM20CQ8IXL6 584 aa7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 ZNF408Q9H9D4 720 aa7.75□□□□□ -1.17
HMGB3P19-201ENST00000403971 SLC22A31A6NKX4 558 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 EIF6P56537 245 aaKnown RBP7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 UVSSAQ2YD98 709 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 OVOS1Q6IE37 1185 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 RUFY4Q6ZNE9 571 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 CDC37L1Q7L3B6 337 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 LSRQ86X29 649 aaPredicted RBP7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 HID1Q8IV36 788 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 FAM169BQ8N8A8 192 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms