RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 RRP1BQ14684 758 aaKnown RBP14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 ALX1Q15699 326 aa14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 MAP3K11Q16584 847 aa14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 SBK1Q52WX2 424 aa14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 C12orf60Q5U649 245 aa14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 MIGA2Q7L4E1 593 aa14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 DHX36Q9H2U1 1008 aaKnown RBP14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 GBA2Q9HCG7 927 aaPredicted RBP14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 LAMA4Q16363 1823 aa14.86□□□□□ -0.03
HLA-DQB1-203ENST00000399082 TMEM88BA6NKF7 163 aa14.85□□□□□ -0.03
HLA-DQB1-203ENST00000399082 PHF20L1A8MW92 1017 aa14.85□□□□□ -0.03
HLA-DQB1-203ENST00000399082 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.85□□□□□ -0.03
HLA-DQB1-203ENST00000399082 EHD4Q9H223 541 aa14.85□□□□□ -0.03
HLA-DQB1-203ENST00000399082 PI4KBQ9UBF8 816 aa14.85□□□□□ -0.03
HLA-DQB1-203ENST00000399082 ZNF112Q9UJU3 913 aa14.85□□□□□ -0.03
HLA-DQB1-203ENST00000399082 TACC3Q9Y6A5 838 aa14.85□□□□□ -0.03
HLA-DQB1-203ENST00000399082 ZMYM6O95789 1325 aa14.85□□□□□ -0.03
HLA-DQB1-203ENST00000399082 ROBO3Q96MS0 1386 aa14.85□□□□□ -0.03
HLA-DQB1-203ENST00000399082 UBE2Q2LH0YL09 131 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 TBC1D12O60347 775 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 FGAP02671 866 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 APPP05067 770 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 INPP5BP32019 993 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 TDO2P48775 406 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 HTRA3P83110 453 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 SHROOM1Q2M3G4 852 aaPredicted RBP14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 LDLRAD1Q5T700 205 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 SAPCD2Q86UD0 394 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 SLC44A5Q8NCS7 719 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 RUFY2Q8WXA3 655 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 KLRG1Q96E93 195 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 DYNLL2Q96FJ2 89 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 DSCC1Q9BVC3 393 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 LSG1Q9H089 658 aaKnown RBP14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 NBPF3Q9H094 633 aa14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 ARPP21Q9UBL0 812 aaPredicted RBP14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 ANGEL1Q9UNK9 670 aaKnown RBP14.84□□□□□ -0.03
HLA-DQB1-203ENST00000399082 POLR3DP05423 398 aaPredicted RBP14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 HLA-DOAP06340 250 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 SHMT1P34896 483 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 NF2P35240 595 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 MFAP1P55081 439 aaKnown RBP14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 FKBP1BP68106 108 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 JAG1P78504 1218 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 TTC6Q86TZ1 520 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 CLMNQ96JQ2 1002 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 ZNF341Q9BYN7 854 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 NAPBQ9H115 298 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 CREBZFQ9NS37 354 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 HERC5Q9UII4 1024 aaKnown RBP14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 SERPINB13Q9UIV8 391 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 TLL2Q9Y6L7 1015 aa14.83□□□□□ -0.04
HLA-DQB1-203ENST00000399082 ATAD5Q96QE3 1844 aa14.82□□□□□ -0.04
HLA-DQB1-203ENST00000399082 DOCK1Q14185 1865 aa14.82□□□□□ -0.04
HLA-DQB1-203ENST00000399082 DCAF15Q66K64 600 aa14.82□□□□□ -0.04
HLA-DQB1-203ENST00000399082 TATDN1Q6P1N9 297 aa14.82□□□□□ -0.04
HLA-DQB1-203ENST00000399082 FOXP4Q8IVH2 680 aaPredicted RBP14.82□□□□□ -0.04
HLA-DQB1-203ENST00000399082 C2orf69Q8N8R5 385 aa14.82□□□□□ -0.04
HLA-DQB1-203ENST00000399082 HOOK2Q96ED9 719 aa14.82□□□□□ -0.04
HLA-DQB1-203ENST00000399082 WRNIP1Q96S55 665 aa14.82□□□□□ -0.04
HLA-DQB1-203ENST00000399082 NACAP1Q9BZK3 213 aa14.82□□□□□ -0.04
HLA-DQB1-203ENST00000399082 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.82□□□□□ -0.04
HLA-DQB1-203ENST00000399082 PHIPQ8WWQ0 1821 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 MINDY4BA8MYZ0 360 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 PPP1R12BO60237 982 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 HSPA6P17066 643 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 CTDSPL2Q05D32 466 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 PPARAQ07869 468 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 C16orf86Q6ZW13 317 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 ARMC9Q7Z3E5 817 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 NKX2-3Q8TAU0 364 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 ZKSCAN4Q969J2 545 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 DDRGK1Q96HY6 314 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 ANAPC4Q9UJX5 808 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 SNCAIPQ9Y6H5 919 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 TAF6LQ9Y6J9 622 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 MYH8P13535 1937 aa14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 GREB1LQ9C091 1923 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB1-203ENST00000399082 IREB2P48200 963 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB1-203ENST00000399082 HUNKP57058 714 aa14.8□□□□□ -0.04
HLA-DQB1-203ENST00000399082 HAND2P61296 217 aa14.8□□□□□ -0.04
HLA-DQB1-203ENST00000399082 VGLL4Q14135 290 aa14.8□□□□□ -0.04
HLA-DQB1-203ENST00000399082 TTLL12Q14166 644 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB1-203ENST00000399082 NOL9Q5SY16 702 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB1-203ENST00000399082 CRACR2BQ8N4Y2 399 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB1-203ENST00000399082 INCENPQ9NQS7 918 aa14.8□□□□□ -0.04
HLA-DQB1-203ENST00000399082 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.8□□□□□ -0.04
HLA-DQB1-203ENST00000399082 GDF11O95390 407 aa14.79□□□□□ -0.04
HLA-DQB1-203ENST00000399082 GJA5P36382 358 aa14.79□□□□□ -0.04
HLA-DQB1-203ENST00000399082 CDK8P49336 464 aa14.79□□□□□ -0.04
HLA-DQB1-203ENST00000399082 MAP3K9P80192 1104 aa14.79□□□□□ -0.04
HLA-DQB1-203ENST00000399082 C8orf34Q49A92 452 aa14.79□□□□□ -0.04
HLA-DQB1-203ENST00000399082 CASC1Q6TDU7 716 aa14.79□□□□□ -0.04
HLA-DQB1-203ENST00000399082 TBC1D10CQ8IV04 446 aa14.79□□□□□ -0.04
HLA-DQB1-203ENST00000399082 ANKRD13AQ8IZ07 590 aa14.79□□□□□ -0.04
HLA-DQB1-203ENST00000399082 STK11IPQ8N1F8 1099 aa14.79□□□□□ -0.04
HLA-DQB1-203ENST00000399082 ANO2Q9NQ90 1003 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms