RNA–Protein interactions for RNA: ENST00000397916.1

TSPEAR-202, Transcript of thrombospondin type laminin G domain and EAR repeats, humanhuman

TSL 1 (best) BASIC

Gene TSPEAR, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPEAR-202ENST00000397916 STRIP1Q5VSL9 837 aa18.98■□□□□ 0.63
TSPEAR-202ENST00000397916 ILDR1Q86SU0 546 aaPredicted RBP18.98■□□□□ 0.63
TSPEAR-202ENST00000397916 UBAC1Q9BSL1 405 aa18.98■□□□□ 0.63
TSPEAR-202ENST00000397916 MYL10Q9BUA6 226 aa18.98■□□□□ 0.63
TSPEAR-202ENST00000397916 MTFR1LQ9H019 292 aa18.98■□□□□ 0.63
TSPEAR-202ENST00000397916 GDPD2Q9HCC8 539 aa18.98■□□□□ 0.63
TSPEAR-202ENST00000397916 TNKSO95271 1327 aa18.98■□□□□ 0.63
TSPEAR-202ENST00000397916 UTRNP46939 3433 aa18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 CDC27P30260 824 aa18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 ADD1P35611 737 aaKnown RBP18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 DACT2Q5SW24 774 aa18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 SUPT20HQ8NEM7 779 aa18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 ROBO3Q96MS0 1386 aa18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 SLC12A7Q9Y666 1083 aa18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 FLT1P17948 1338 aa18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 ERICH2A1L162 156 aa18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 CCDC69A6NI79 296 aa18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 SLC3A2P08195 630 aaKnown RBP18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 NCLP19338 710 aaKnown RBP18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 CCDC93Q567U6 631 aa18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 FERMT3Q86UX7 667 aa18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 ENAHQ8N8S7 591 aaPredicted RBP18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 FAM217BQ9NTX9 383 aaPredicted RBP18.97■□□□□ 0.63
TSPEAR-202ENST00000397916 NID2Q14112 1375 aa18.96■□□□□ 0.63
TSPEAR-202ENST00000397916 GOLGA6L3A6NEY3 463 aa18.96■□□□□ 0.63
TSPEAR-202ENST00000397916 SCNN1DP51172 638 aa18.96■□□□□ 0.63
TSPEAR-202ENST00000397916 PLCD1P51178 756 aa18.96■□□□□ 0.63
TSPEAR-202ENST00000397916 PDE4BQ07343 736 aa18.96■□□□□ 0.63
TSPEAR-202ENST00000397916 R3HDM1Q15032 1099 aaKnown RBP18.96■□□□□ 0.63
TSPEAR-202ENST00000397916 CCDC144CPQ8IYA2 1237 aa18.96■□□□□ 0.63
TSPEAR-202ENST00000397916 ZSCAN10Q96SZ4 725 aaPredicted RBP18.96■□□□□ 0.63
TSPEAR-202ENST00000397916 SAP30BPQ9UHR5 308 aaKnown RBP18.96■□□□□ 0.63
TSPEAR-202ENST00000397916 ATP6V1DQ9Y5K8 247 aa18.96■□□□□ 0.63
TSPEAR-202ENST00000397916 CPLX1O14810 134 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 FKBP1AP62942 108 aaKnown RBP18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 GRIPAP1Q4V328 841 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 TMTC2Q8N394 836 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 DYNLL2Q96FJ2 89 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 MYH1P12882 1939 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 GOLGA8AA7E2F4 631 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 PPIP5K2O43314 1243 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 CAVIN1Q6NZI2 390 aaKnown RBP18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 GAS2L3Q86XJ1 694 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 RTKN2Q8IZC4 609 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 PSMD1Q99460 953 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 CNPY2Q9Y2B0 182 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 KIF3AQ9Y496 699 aa18.95■□□□□ 0.62
TSPEAR-202ENST00000397916 USP17L3A6NCW0 530 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 USP17L4A6NCW7 530 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 YDJCA8MPS7 323 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 POLD1P28340 1107 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 TGFB2P61812 414 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 NTRK3Q16288 839 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 FAM47AQ5JRC9 791 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 HHIPL2Q6UWX4 724 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 USP17L1Q7RTZ2 530 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 IQCA1Q86XH1 822 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 UPF1Q92900 1129 aaKnown RBP eCLIP18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 RBM27Q9P2N5 1060 aaKnown RBP18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 H3BQV1 296 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 POLR3DP05423 398 aaPredicted RBP18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 DNM1Q05193 864 aaKnown RBP18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 IFFO2Q5TF58 517 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 AMOTL1Q8IY63 956 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 TEKT1Q969V4 418 aa18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 ORC3Q9UBD5 711 aaPredicted RBP18.94■□□□□ 0.62
TSPEAR-202ENST00000397916 NMT2O60551 498 aa18.93■□□□□ 0.62
TSPEAR-202ENST00000397916 FOSBP53539 338 aa18.93■□□□□ 0.62
TSPEAR-202ENST00000397916 APOBEC3HQ6NTF7 200 aaKnown RBP18.93■□□□□ 0.62
TSPEAR-202ENST00000397916 SYNE3Q6ZMZ3 975 aa18.93■□□□□ 0.62
TSPEAR-202ENST00000397916 KIAA0825Q8IV33 1275 aa18.93■□□□□ 0.62
TSPEAR-202ENST00000397916 ZNF654Q8IZM8 581 aa18.93■□□□□ 0.62
TSPEAR-202ENST00000397916 BRCA1P38398 1863 aaKnown RBP18.93■□□□□ 0.62
TSPEAR-202ENST00000397916 GADD45BO75293 160 aaPredicted RBP18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 WDHD1O75717 1129 aaPredicted RBP18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 FAM173BQ6P4H8 233 aa18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 USP48Q86UV5 1035 aa18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 SLC44A5Q8NCS7 719 aa18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 COL4A5P29400 1685 aa18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 PSME4Q14997 1843 aa18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 CRKP46108 304 aa18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 RCAN1P53805 252 aa18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 RESTQ13127 1097 aa18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 IFIT1BQ5T764 474 aaKnown RBP18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 TMEM87AQ8NBN3 555 aa18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 SGIP1Q9BQI5 828 aa18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 PIM2Q9P1W9 311 aa18.92■□□□□ 0.62
TSPEAR-202ENST00000397916 ECM29Q5VYK3 1845 aa18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 TSPY2A6NKD2 308 aa18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 L1TD1Q5T7N2 865 aaKnown RBP18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 CDC42EP5Q6NZY7 148 aa18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 PHKBQ93100 1093 aa18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 MRIQ9BWK5 157 aa18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 DDX4Q9NQI0 724 aaKnown RBP18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 CDKL5O76039 1030 aa18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 XRCC6P12956 609 aaKnown RBP eCLIP18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 RTN1Q16799 776 aa18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 ZDHHC15Q96MV8 337 aa18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 ZNF277Q9NRM2 450 aaPredicted RBP18.91■□□□□ 0.62
TSPEAR-202ENST00000397916 USP40Q9NVE5 1235 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms