RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SPECC1Q5M775 1068 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 SLC9C2Q5TAH2 1124 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 TRIM65Q6PJ69 517 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 VSTM4Q8IW00 320 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 DRC1Q96MC2 740 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 FUT8Q9BYC5 575 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 ASAP1Q9ULH1 1129 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 FOXN1O15353 648 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 RESP18Q5W5W9 173 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 APOA5Q6Q788 366 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 CNNM3Q8NE01 707 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 PPM1EQ8WY54 764 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 MAP3K14Q99558 947 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 ISCA1Q9BUE6 129 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 WDR19Q8NEZ3 1342 aa18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 CDKL5O76039 1030 aa18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 PDE4BQ07343 736 aa18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 IFIT5Q13325 482 aaKnown RBP18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 METTL24Q5JXM2 366 aa18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 NFXL1Q6ZNB6 911 aa18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 FOXP4Q8IVH2 680 aaPredicted RBP18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 SYNE4Q8N205 404 aa18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 INCENPQ9NQS7 918 aa18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 IDH1O75874 414 aaKnown RBP18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 CPLX2Q6PUV4 134 aaKnown RBP18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 PCDHA5Q9Y5H7 936 aa18.25■□□□□ 0.51
CHMP1A-201ENST00000397901 TCIRG1Q13488 830 aa18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 ROBO1Q9Y6N7 1651 aa18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 EIF3CLB5ME19 914 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 ZBTB43O43298 467 aa18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 RANBP6O60518 1105 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 ADD2P35612 726 aa18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 IARSP41252 1262 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 TRIM29Q14134 588 aa18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 CCDC102BQ68D86 513 aa18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 DNAJC10Q8IXB1 793 aa18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 PDILTQ8N807 584 aa18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 EIF3CQ99613 913 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 TEX13AQ9BXU3 409 aaPredicted RBP18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 INTS13Q9NVM9 706 aa18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 KCNH3Q9ULD8 1083 aa18.24■□□□□ 0.51
CHMP1A-201ENST00000397901 PLCH1Q4KWH8 1693 aa18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 COL16A1Q07092 1604 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 GOLGA8AA7E2F4 631 aa18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 JAKMIP3Q5VZ66 844 aa18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 SUGP1Q8IWZ8 645 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 PIH1D3Q9NQM4 214 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 PARP3Q9Y6F1 533 aa18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 DDX60Q8IY21 1712 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 BMP6P22004 513 aa18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 BRD2P25440 801 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 ZNF622Q969S3 477 aaKnown RBP eCLIP18.23■□□□□ 0.51
CHMP1A-201ENST00000397901 UBN2Q6ZU65 1347 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 STK11IPQ8N1F8 1099 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 SLC26A6Q9BXS9 759 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 EPC1Q9H2F5 836 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 MKRN1Q9UHC7 482 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 RIC1Q4ADV7 1423 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 LRP6O75581 1613 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 AHDC1Q5TGY3 1603 aaPredicted RBP18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 H3BQF6 201 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 CUTAO60888 179 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 TRIM28Q13263 835 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 TMEM67Q5HYA8 995 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 LDHAL6AQ6ZMR3 332 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 CCDC91Q7Z6B0 441 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 GPATCH11Q8N954 259 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 PPP2R2CQ9Y2T4 447 aa18.22■□□□□ 0.51
CHMP1A-201ENST00000397901 ZNF532Q9HCE3 1301 aa18.21■□□□□ 0.51
CHMP1A-201ENST00000397901 FAM237AA0A1B0GTK4 181 aa18.21■□□□□ 0.51
CHMP1A-201ENST00000397901 VWA3AA6NCI4 1184 aa18.21■□□□□ 0.51
CHMP1A-201ENST00000397901 NTRK3Q16288 839 aa18.21■□□□□ 0.51
CHMP1A-201ENST00000397901 TMEM139Q8IV31 216 aa18.21■□□□□ 0.51
CHMP1A-201ENST00000397901 FBXO3Q9UK99 471 aa18.21■□□□□ 0.51
CHMP1A-201ENST00000397901 BCL9O00512 1426 aa18.21■□□□□ 0.51
CHMP1A-201ENST00000397901 ZSCAN12O43309 604 aa18.21■□□□□ 0.5
CHMP1A-201ENST00000397901 CORO7P57737 925 aa18.21■□□□□ 0.5
CHMP1A-201ENST00000397901 GRIN1Q05586 938 aa18.21■□□□□ 0.5
CHMP1A-201ENST00000397901 ZNF827Q17R98 1081 aa18.21■□□□□ 0.5
CHMP1A-201ENST00000397901 SWT1Q5T5J6 900 aaKnown RBP18.21■□□□□ 0.5
CHMP1A-201ENST00000397901 RABGGTAQ92696 567 aa18.21■□□□□ 0.5
CHMP1A-201ENST00000397901 PARD6BQ9BYG5 372 aa18.21■□□□□ 0.5
CHMP1A-201ENST00000397901 FAM217BQ9NTX9 383 aaPredicted RBP18.21■□□□□ 0.5
CHMP1A-201ENST00000397901 MAP2K7O14733 419 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 GPTP24298 496 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 RSRC2Q7L4I2 434 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 TRMT44Q8IYL2 757 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 KRI1Q8N9T8 703 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 IGDCC4Q8TDY8 1250 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 MPHOSPH8Q99549 860 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 GREM2Q9H772 168 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 LY9Q9HBG7 655 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 CNNM1Q9NRU3 951 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 WWC3Q9ULE0 1092 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 MYH7P12883 1935 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms