RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ADAMTSL1Q8N6G6 1762 aa22.72■■□□□ 1.23
PDLIM2-204ENST00000397760 WDR19Q8NEZ3 1342 aa22.72■■□□□ 1.23
PDLIM2-204ENST00000397760 KDM4AO75164 1064 aa22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 FGRP09769 529 aa22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 BRF1Q92994 677 aa22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 TDRD3Q9H7E2 651 aaKnown RBP22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 ZSWIM5Q9P217 1185 aa22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 TPCN1Q9ULQ1 816 aa22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 BAZ2AQ9UIF9 1905 aaKnown RBP22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 SPDYE2BA6NHP3 402 aa22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 SPDYE6P0CI01 402 aa22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 PLCD1P51178 756 aa22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 NFIAQ12857 509 aa22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 AGXT2Q9BYV1 514 aa22.71■■□□□ 1.23
PDLIM2-204ENST00000397760 ZNF541Q9H0D2 1346 aa22.7■■□□□ 1.22
PDLIM2-204ENST00000397760 PRDM1O75626 825 aa22.7■■□□□ 1.22
PDLIM2-204ENST00000397760 CACNB3P54284 484 aa22.7■■□□□ 1.22
PDLIM2-204ENST00000397760 ZNF445P59923 1031 aa22.7■■□□□ 1.22
PDLIM2-204ENST00000397760 PDE4BQ07343 736 aa22.7■■□□□ 1.22
PDLIM2-204ENST00000397760 FBXL16Q8N461 479 aa22.7■■□□□ 1.22
PDLIM2-204ENST00000397760 ESR2Q92731 530 aa22.7■■□□□ 1.22
PDLIM2-204ENST00000397760 IDI2Q9BXS1 227 aa22.7■■□□□ 1.22
PDLIM2-204ENST00000397760 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.7■■□□□ 1.22
PDLIM2-204ENST00000397760 GMPSP49915 693 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-204ENST00000397760 MMP14P50281 582 aa22.69■■□□□ 1.22
PDLIM2-204ENST00000397760 DYNLL2Q96FJ2 89 aa22.69■■□□□ 1.22
PDLIM2-204ENST00000397760 OSBPL5Q9H0X9 879 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-204ENST00000397760 SH2B1Q9NRF2 756 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-204ENST00000397760 LMBRD1Q9NUN5 540 aa22.69■■□□□ 1.22
PDLIM2-204ENST00000397760 LARGE1O95461 756 aa22.68■■□□□ 1.22
PDLIM2-204ENST00000397760 ME3Q16798 604 aa22.68■■□□□ 1.22
PDLIM2-204ENST00000397760 SRCAPQ6ZRS2 3230 aa22.68■■□□□ 1.22
PDLIM2-204ENST00000397760 GAS2L3Q86XJ1 694 aa22.68■■□□□ 1.22
PDLIM2-204ENST00000397760 MTMR14Q8NCE2 650 aa22.68■■□□□ 1.22
PDLIM2-204ENST00000397760 DPF2Q92785 391 aa22.68■■□□□ 1.22
PDLIM2-204ENST00000397760 GPHNQ9NQX3 736 aaPredicted RBP22.68■■□□□ 1.22
PDLIM2-204ENST00000397760 ROBO3Q96MS0 1386 aa22.68■■□□□ 1.22
PDLIM2-204ENST00000397760 ORC4O43929 436 aa22.68■■□□□ 1.22
PDLIM2-204ENST00000397760 GPR162Q16538 588 aa22.68■■□□□ 1.22
PDLIM2-204ENST00000397760 TTC6Q86TZ1 520 aa22.68■■□□□ 1.22
PDLIM2-204ENST00000397760 SHTN1A0MZ66 631 aa22.67■■□□□ 1.22
PDLIM2-204ENST00000397760 APOBRQ0VD83 1088 aa22.67■■□□□ 1.22
PDLIM2-204ENST00000397760 MCTP1Q6DN14 999 aa22.67■■□□□ 1.22
PDLIM2-204ENST00000397760 TMEM87BQ96K49 555 aa22.67■■□□□ 1.22
PDLIM2-204ENST00000397760 MYOZ2Q9NPC6 264 aa22.67■■□□□ 1.22
PDLIM2-204ENST00000397760 RNF181Q9P0P0 153 aa22.67■■□□□ 1.22
PDLIM2-204ENST00000397760 FAM198AQ9UFP1 575 aa22.67■■□□□ 1.22
PDLIM2-204ENST00000397760 RANBP6O60518 1105 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 NPM3O75607 178 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 ZNF280AP59817 542 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 RRAGDQ9NQL2 400 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 TMOD2Q9NZR1 351 aa22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 NAV1Q8NEY1 1877 aa22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 SH2B2O14492 632 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 IFIT3O14879 490 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 CLCN1P35523 988 aa22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 TCP10Q12799 353 aa22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 ZFPM1Q8IX07 1006 aa22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 IGDCC4Q8TDY8 1250 aa22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 MKNK2Q9HBH9 465 aa22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 ZNF70Q9UC06 446 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-204ENST00000397760 C16orf86Q6ZW13 317 aa22.65■■□□□ 1.22
PDLIM2-204ENST00000397760 MICALL2Q8IY33 904 aa22.65■■□□□ 1.22
PDLIM2-204ENST00000397760 ZBED3Q96IU2 234 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-204ENST00000397760 CNOT7Q9UIV1 285 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-204ENST00000397760 ANGEL1Q9UNK9 670 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-204ENST00000397760 ZDHHC9Q9Y397 364 aa22.65■■□□□ 1.22
PDLIM2-204ENST00000397760 CDK5RAP2Q96SN8 1893 aa22.65■■□□□ 1.22
PDLIM2-204ENST00000397760 CLRN2A0PK11 232 aa22.64■■□□□ 1.22
PDLIM2-204ENST00000397760 SART3Q15020 963 aaKnown RBP22.64■■□□□ 1.22
PDLIM2-204ENST00000397760 TMEM67Q5HYA8 995 aa22.64■■□□□ 1.22
PDLIM2-204ENST00000397760 NECAB1Q8N987 351 aa22.64■■□□□ 1.22
PDLIM2-204ENST00000397760 ZKSCAN3Q9BRR0 538 aa22.64■■□□□ 1.22
PDLIM2-204ENST00000397760 MTA3Q9BTC8 594 aa22.64■■□□□ 1.22
PDLIM2-204ENST00000397760 ZNF287Q9HBT7 754 aa22.64■■□□□ 1.22
PDLIM2-204ENST00000397760 LAMB1P07942 1786 aa22.64■■□□□ 1.21
PDLIM2-204ENST00000397760 ENTPD3O75355 529 aa22.64■■□□□ 1.21
PDLIM2-204ENST00000397760 HLA-DOAP06340 250 aa22.64■■□□□ 1.21
PDLIM2-204ENST00000397760 STK3Q13188 491 aa22.64■■□□□ 1.21
PDLIM2-204ENST00000397760 C9orf131Q5VYM1 1079 aa22.64■■□□□ 1.21
PDLIM2-204ENST00000397760 CCDC83Q8IWF9 413 aa22.64■■□□□ 1.21
PDLIM2-204ENST00000397760 GPC2Q8N158 579 aa22.64■■□□□ 1.21
PDLIM2-204ENST00000397760 SLC44A5Q8NCS7 719 aa22.64■■□□□ 1.21
PDLIM2-204ENST00000397760 UBAC1Q9BSL1 405 aa22.64■■□□□ 1.21
PDLIM2-204ENST00000397760 DHX36Q9H2U1 1008 aaKnown RBP22.64■■□□□ 1.21
PDLIM2-204ENST00000397760 DDX60LQ5H9U9 1706 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 ERICH2A1L162 156 aa22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 WNT10BO00744 389 aa22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 MYO1BO43795 1136 aa22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 CDK8P49336 464 aa22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 NT5C2P49902 561 aa22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 EVCP57679 992 aa22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 CCDC173Q0VFZ6 552 aa22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 SPDYE2Q495Y8 402 aa22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 FAM47AQ5JRC9 791 aa22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 RBM26Q5T8P6 1007 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 NAP1L2Q9ULW6 460 aaPredicted RBP22.63■■□□□ 1.21
PDLIM2-204ENST00000397760 FOCADQ5VW36 1801 aa22.62■■□□□ 1.21
PDLIM2-204ENST00000397760 TCP10L2B9ZVM9 353 aa22.62■■□□□ 1.21
PDLIM2-204ENST00000397760 BRD1O95696 1058 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms