RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 CTDSPL2Q05D32 466 aa23.14■■□□□ 1.29
MAP1LC3A-203ENST00000397709 GABPAQ06546 454 aa23.14■■□□□ 1.29
MAP1LC3A-203ENST00000397709 NBPF12Q5TAG4 269 aaPredicted RBP23.14■■□□□ 1.29
MAP1LC3A-203ENST00000397709 CHADLQ6NUI6 762 aa23.14■■□□□ 1.29
MAP1LC3A-203ENST00000397709 TBC1D10CQ8IV04 446 aa23.14■■□□□ 1.29
MAP1LC3A-203ENST00000397709 SERPINB13Q9UIV8 391 aa23.14■■□□□ 1.29
MAP1LC3A-203ENST00000397709 TAOK2Q9UL54 1235 aa23.14■■□□□ 1.29
MAP1LC3A-203ENST00000397709 SSC5DA1L4H1 1573 aa23.14■■□□□ 1.29
MAP1LC3A-203ENST00000397709 MCCP23508 829 aa23.13■■□□□ 1.29
MAP1LC3A-203ENST00000397709 RNF20Q5VTR2 975 aa23.13■■□□□ 1.29
MAP1LC3A-203ENST00000397709 PRAMEF18Q5VWM3 479 aa23.13■■□□□ 1.29
MAP1LC3A-203ENST00000397709 DLK2Q6UY11 383 aa23.13■■□□□ 1.29
MAP1LC3A-203ENST00000397709 C16orf86Q6ZW13 317 aa23.13■■□□□ 1.29
MAP1LC3A-203ENST00000397709 FOXP4Q8IVH2 680 aaPredicted RBP23.13■■□□□ 1.29
MAP1LC3A-203ENST00000397709 DYNLL2Q96FJ2 89 aa23.13■■□□□ 1.29
MAP1LC3A-203ENST00000397709 TAF6LQ9Y6J9 622 aa23.13■■□□□ 1.29
MAP1LC3A-203ENST00000397709 TBC1D12O60347 775 aa23.12■■□□□ 1.29
MAP1LC3A-203ENST00000397709 SLC3A2P08195 630 aaKnown RBP23.12■■□□□ 1.29
MAP1LC3A-203ENST00000397709 MAP3K10Q02779 954 aa23.12■■□□□ 1.29
MAP1LC3A-203ENST00000397709 RASEFQ8IZ41 740 aa23.12■■□□□ 1.29
MAP1LC3A-203ENST00000397709 STAG1Q8WVM7 1258 aa23.12■■□□□ 1.29
MAP1LC3A-203ENST00000397709 CDCA5Q96FF9 252 aa23.12■■□□□ 1.29
MAP1LC3A-203ENST00000397709 DNAJC18Q9H819 358 aa23.12■■□□□ 1.29
MAP1LC3A-203ENST00000397709 UPF2Q9HAU5 1272 aaKnown RBP23.12■■□□□ 1.29
MAP1LC3A-203ENST00000397709 HERC5Q9UII4 1024 aaKnown RBP23.12■■□□□ 1.29
MAP1LC3A-203ENST00000397709 TACC3Q9Y6A5 838 aa23.12■■□□□ 1.29
MAP1LC3A-203ENST00000397709 FGRP09769 529 aa23.11■■□□□ 1.29
MAP1LC3A-203ENST00000397709 SLURP2P0DP57 97 aa23.11■■□□□ 1.29
MAP1LC3A-203ENST00000397709 TSGA10IPQ3SY00 556 aa23.11■■□□□ 1.29
MAP1LC3A-203ENST00000397709 SUPT20HL1Q3ZLR7 823 aa23.11■■□□□ 1.29
MAP1LC3A-203ENST00000397709 AKNAD1Q5T1N1 836 aa23.11■■□□□ 1.29
MAP1LC3A-203ENST00000397709 HOOK2Q96ED9 719 aa23.11■■□□□ 1.29
MAP1LC3A-203ENST00000397709 SWAP70Q9UH65 585 aa23.11■■□□□ 1.29
MAP1LC3A-203ENST00000397709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.11■■□□□ 1.29
MAP1LC3A-203ENST00000397709 STOX1Q6ZVD7 989 aa23.1■■□□□ 1.29
MAP1LC3A-203ENST00000397709 CRACR2BQ8N4Y2 399 aaPredicted RBP23.1■■□□□ 1.29
MAP1LC3A-203ENST00000397709 SLC44A5Q8NCS7 719 aa23.1■■□□□ 1.29
MAP1LC3A-203ENST00000397709 C22orf23Q9BZE7 217 aa23.1■■□□□ 1.29
MAP1LC3A-203ENST00000397709 RNF41Q9H4P4 317 aaPredicted RBP23.1■■□□□ 1.29
MAP1LC3A-203ENST00000397709 SNX14Q9Y5W7 946 aa23.1■■□□□ 1.29
MAP1LC3A-203ENST00000397709 FAM196BA6NMK8 535 aa23.09■■□□□ 1.29
MAP1LC3A-203ENST00000397709 PCP11498 1178 aaKnown RBP23.09■■□□□ 1.29
MAP1LC3A-203ENST00000397709 ZKSCAN1P17029 563 aaPredicted RBP23.09■■□□□ 1.29
MAP1LC3A-203ENST00000397709 SHMT1P34896 483 aa23.09■■□□□ 1.29
MAP1LC3A-203ENST00000397709 CDK8P49336 464 aa23.09■■□□□ 1.29
MAP1LC3A-203ENST00000397709 RBM25P49756 843 aaKnown RBP23.09■■□□□ 1.29
MAP1LC3A-203ENST00000397709 PDE4BQ07343 736 aa23.09■■□□□ 1.29
MAP1LC3A-203ENST00000397709 STK11IPQ8N1F8 1099 aa23.09■■□□□ 1.29
MAP1LC3A-203ENST00000397709 IL17RAQ96F46 866 aa23.09■■□□□ 1.29
MAP1LC3A-203ENST00000397709 MYH8P13535 1937 aa23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 E7EWF7 191 aa23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 TRAF5O00463 557 aa23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 ORC4O43929 436 aa23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 ITGBL1O95965 494 aaPredicted RBP23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 ANAPC15P60006 121 aa23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 DCAF15Q66K64 600 aa23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 MFSD6Q6ZSS7 791 aa23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 MIGA2Q7L4E1 593 aa23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 TRIM34Q9BYJ4 488 aa23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 INCENPQ9NQS7 918 aa23.08■■□□□ 1.29
MAP1LC3A-203ENST00000397709 NEDD4P46934 1319 aa23.08■■□□□ 1.28
MAP1LC3A-203ENST00000397709 TATDN1Q6P1N9 297 aa23.07■■□□□ 1.28
MAP1LC3A-203ENST00000397709 SMC1BQ8NDV3 1235 aa23.07■■□□□ 1.28
MAP1LC3A-203ENST00000397709 RBM46Q8TBY0 533 aaKnown RBP23.07■■□□□ 1.28
MAP1LC3A-203ENST00000397709 TBC1D32Q96NH3 1257 aa23.07■■□□□ 1.28
MAP1LC3A-203ENST00000397709 ZNF287Q9HBT7 754 aa23.07■■□□□ 1.28
MAP1LC3A-203ENST00000397709 TOMM70O94826 608 aa23.06■■□□□ 1.28
MAP1LC3A-203ENST00000397709 KRT32Q14532 448 aa23.06■■□□□ 1.28
MAP1LC3A-203ENST00000397709 ZNF341Q9BYN7 854 aa23.06■■□□□ 1.28
MAP1LC3A-203ENST00000397709 PAPPA2Q9BXP8 1791 aa23.05■■□□□ 1.28
MAP1LC3A-203ENST00000397709 PRDM1O75626 825 aa23.05■■□□□ 1.28
MAP1LC3A-203ENST00000397709 RASA1P20936 1047 aa23.05■■□□□ 1.28
MAP1LC3A-203ENST00000397709 NF2P35240 595 aa23.05■■□□□ 1.28
MAP1LC3A-203ENST00000397709 FMR1Q06787 632 aaKnown RBP eCLIP23.05■■□□□ 1.28
MAP1LC3A-203ENST00000397709 ADCK5Q3MIX3 580 aa23.05■■□□□ 1.28
MAP1LC3A-203ENST00000397709 CNNM2Q9H8M5 875 aa23.05■■□□□ 1.28
MAP1LC3A-203ENST00000397709 MKNK2Q9HBH9 465 aa23.05■■□□□ 1.28
MAP1LC3A-203ENST00000397709 PHF20L1A8MW92 1017 aa23.04■■□□□ 1.28
MAP1LC3A-203ENST00000397709 NT5C2P49902 561 aa23.04■■□□□ 1.28
MAP1LC3A-203ENST00000397709 RRP1BQ14684 758 aaKnown RBP23.04■■□□□ 1.28
MAP1LC3A-203ENST00000397709 NKX2-3Q8TAU0 364 aa23.04■■□□□ 1.28
MAP1LC3A-203ENST00000397709 KRT23Q9C075 422 aa23.04■■□□□ 1.28
MAP1LC3A-203ENST00000397709 ZNF112Q9UJU3 913 aa23.04■■□□□ 1.28
MAP1LC3A-203ENST00000397709 TRPM7Q96QT4 1865 aa23.04■■□□□ 1.28
MAP1LC3A-203ENST00000397709 USP2O75604 605 aaPredicted RBP23.03■■□□□ 1.28
MAP1LC3A-203ENST00000397709 TRDNQ13061 729 aa23.03■■□□□ 1.28
MAP1LC3A-203ENST00000397709 RRP12Q5JTH9 1297 aaKnown RBP23.03■■□□□ 1.28
MAP1LC3A-203ENST00000397709 NCOA7Q8NI08 942 aa23.03■■□□□ 1.28
MAP1LC3A-203ENST00000397709 PASKQ96RG2 1323 aa23.03■■□□□ 1.28
MAP1LC3A-203ENST00000397709 GREB1LQ9C091 1923 aaPredicted RBP23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 B4E1Z4 1266 aa23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 PPP1R12BO60237 982 aaPredicted RBP23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 CERKLQ49MI3 558 aaPredicted RBP23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 RALYLQ86SE5 291 aaKnown RBP23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 MB21D2Q8IYB1 491 aaPredicted RBP23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 ZNF444Q8N0Y2 327 aaPredicted RBP23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 KLRG1Q96E93 195 aa23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 CCDC17Q96LX7 622 aa23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 JAKMIP1Q96N16 626 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms