RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 RRP12Q5JTH9 1297 aaKnown RBP32.46■■■□□ 2.79
CPNE1-203ENST00000397442 ZFPM1Q8IX07 1006 aa32.46■■■□□ 2.79
CPNE1-203ENST00000397442 DYNLL2Q96FJ2 89 aa32.46■■■□□ 2.79
CPNE1-203ENST00000397442 SPRYD3Q8NCJ5 442 aa32.46■■■□□ 2.79
CPNE1-203ENST00000397442 BRF1Q92994 677 aa32.46■■■□□ 2.79
CPNE1-203ENST00000397442 GPHNQ9NQX3 736 aaPredicted RBP32.46■■■□□ 2.79
CPNE1-203ENST00000397442 TOMM22Q9NS69 142 aa32.46■■■□□ 2.79
CPNE1-203ENST00000397442 PRDM1O75626 825 aa32.45■■■□□ 2.79
CPNE1-203ENST00000397442 MICALL2Q8IY33 904 aa32.45■■■□□ 2.79
CPNE1-203ENST00000397442 GPC2Q8N158 579 aa32.45■■■□□ 2.79
CPNE1-203ENST00000397442 CUL4AQ13619 759 aa32.44■■■□□ 2.78
CPNE1-203ENST00000397442 SPDYE2Q495Y8 402 aa32.44■■■□□ 2.78
CPNE1-203ENST00000397442 C9orf131Q5VYM1 1079 aa32.44■■■□□ 2.78
CPNE1-203ENST00000397442 ZNF70Q9UC06 446 aaPredicted RBP32.44■■■□□ 2.78
CPNE1-203ENST00000397442 CNOT7Q9UIV1 285 aaKnown RBP32.44■■■□□ 2.78
CPNE1-203ENST00000397442 WNT10BO00744 389 aa32.43■■■□□ 2.78
CPNE1-203ENST00000397442 EGFRP00533 1210 aa32.43■■■□□ 2.78
CPNE1-203ENST00000397442 PDE4BQ07343 736 aa32.43■■■□□ 2.78
CPNE1-203ENST00000397442 ME3Q16798 604 aa32.43■■■□□ 2.78
CPNE1-203ENST00000397442 ESR2Q92731 530 aa32.43■■■□□ 2.78
CPNE1-203ENST00000397442 ZSCAN31Q96LW9 406 aaPredicted RBP32.43■■■□□ 2.78
CPNE1-203ENST00000397442 FGD1P98174 961 aa32.42■■■□□ 2.78
CPNE1-203ENST00000397442 TCP10Q12799 353 aa32.42■■■□□ 2.78
CPNE1-203ENST00000397442 NBPF9Q3BBW0 867 aa32.42■■■□□ 2.78
CPNE1-203ENST00000397442 C16orf86Q6ZW13 317 aa32.42■■■□□ 2.78
CPNE1-203ENST00000397442 TTC6Q86TZ1 520 aa32.42■■■□□ 2.78
CPNE1-203ENST00000397442 SLC44A5Q8NCS7 719 aa32.42■■■□□ 2.78
CPNE1-203ENST00000397442 IGDCC4Q8TDY8 1250 aa32.42■■■□□ 2.78
CPNE1-203ENST00000397442 SIPA1L1O43166 1804 aa32.41■■■□□ 2.78
CPNE1-203ENST00000397442 CLRN2A0PK11 232 aa32.41■■■□□ 2.78
CPNE1-203ENST00000397442 ENTPD3O75355 529 aa32.41■■■□□ 2.78
CPNE1-203ENST00000397442 TMEM87BQ96K49 555 aa32.41■■■□□ 2.78
CPNE1-203ENST00000397442 SH2B2O14492 632 aaPredicted RBP32.4■■■□□ 2.78
CPNE1-203ENST00000397442 EVCP57679 992 aa32.4■■■□□ 2.78
CPNE1-203ENST00000397442 GABPAQ06546 454 aa32.4■■■□□ 2.78
CPNE1-203ENST00000397442 SH3BP5LQ7L8J4 393 aa32.4■■■□□ 2.78
CPNE1-203ENST00000397442 SH2B1Q9NRF2 756 aaPredicted RBP32.4■■■□□ 2.78
CPNE1-203ENST00000397442 APOBRQ0VD83 1088 aa32.4■■■□□ 2.78
CPNE1-203ENST00000397442 COL2A1P02458 1487 aaPredicted RBP32.39■■■□□ 2.78
CPNE1-203ENST00000397442 DDTLA6NHG4 134 aaPredicted RBP32.39■■■□□ 2.78
CPNE1-203ENST00000397442 RANBP6O60518 1105 aaKnown RBP32.39■■■□□ 2.78
CPNE1-203ENST00000397442 CDK8P49336 464 aa32.39■■■□□ 2.78
CPNE1-203ENST00000397442 ST3GAL1Q11201 340 aa32.39■■■□□ 2.78
CPNE1-203ENST00000397442 SAMD7Q7Z3H4 446 aa32.39■■■□□ 2.78
CPNE1-203ENST00000397442 MTA3Q9BTC8 594 aa32.39■■■□□ 2.78
CPNE1-203ENST00000397442 GPRC5DQ9NZD1 345 aa32.39■■■□□ 2.78
CPNE1-203ENST00000397442 TMOD2Q9NZR1 351 aa32.39■■■□□ 2.78
CPNE1-203ENST00000397442 ANGEL1Q9UNK9 670 aaKnown RBP32.39■■■□□ 2.78
CPNE1-203ENST00000397442 ATRNL1Q5VV63 1379 aa32.38■■■□□ 2.77
CPNE1-203ENST00000397442 GRIN3BO60391 1043 aa32.38■■■□□ 2.77
CPNE1-203ENST00000397442 DHX36Q9H2U1 1008 aaKnown RBP32.38■■■□□ 2.77
CPNE1-203ENST00000397442 FOXD4L1Q9NU39 408 aa32.38■■■□□ 2.77
CPNE1-203ENST00000397442 FKBP1CQ5VVH2 108 aa32.37■■■□□ 2.77
CPNE1-203ENST00000397442 ZKSCAN3Q9BRR0 538 aa32.37■■■□□ 2.77
CPNE1-203ENST00000397442 LY9Q9HBG7 655 aa32.37■■■□□ 2.77
CPNE1-203ENST00000397442 SENP2Q9HC62 589 aa32.37■■■□□ 2.77
CPNE1-203ENST00000397442 CNTNAP1P78357 1384 aa32.37■■■□□ 2.77
CPNE1-203ENST00000397442 TCP10L2B9ZVM9 353 aa32.37■■■□□ 2.77
CPNE1-203ENST00000397442 HSP90AA1P07900 732 aaKnown RBP32.37■■■□□ 2.77
CPNE1-203ENST00000397442 RASA1P20936 1047 aa32.37■■■□□ 2.77
CPNE1-203ENST00000397442 RBM26Q5T8P6 1007 aaKnown RBP32.37■■■□□ 2.77
CPNE1-203ENST00000397442 BRPF3Q9ULD4 1205 aa32.37■■■□□ 2.77
CPNE1-203ENST00000397442 IFIT3O14879 490 aaKnown RBP32.36■■■□□ 2.77
CPNE1-203ENST00000397442 MYO1BO43795 1136 aa32.36■■■□□ 2.77
CPNE1-203ENST00000397442 DDNO94850 711 aaPredicted RBP32.36■■■□□ 2.77
CPNE1-203ENST00000397442 NT5C2P49902 561 aa32.36■■■□□ 2.77
CPNE1-203ENST00000397442 TMEM67Q5HYA8 995 aa32.36■■■□□ 2.77
CPNE1-203ENST00000397442 FAM47AQ5JRC9 791 aa32.36■■■□□ 2.77
CPNE1-203ENST00000397442 EHD4Q9H223 541 aa32.36■■■□□ 2.77
CPNE1-203ENST00000397442 MKNK2Q9HBH9 465 aa32.36■■■□□ 2.77
CPNE1-203ENST00000397442 SERPINB13Q9UIV8 391 aa32.36■■■□□ 2.77
CPNE1-203ENST00000397442 HLA-DOAP06340 250 aa32.35■■■□□ 2.77
CPNE1-203ENST00000397442 TBC1D10BQ4KMP7 808 aaPredicted RBP32.35■■■□□ 2.77
CPNE1-203ENST00000397442 NECAB1Q8N987 351 aa32.35■■■□□ 2.77
CPNE1-203ENST00000397442 INTS4Q96HW7 963 aaKnown RBP32.35■■■□□ 2.77
CPNE1-203ENST00000397442 SLKQ9H2G2 1235 aaPredicted RBP32.35■■■□□ 2.77
CPNE1-203ENST00000397442 DDIT3P35638 169 aa32.34■■■□□ 2.77
CPNE1-203ENST00000397442 LIFRP42702 1097 aa32.34■■■□□ 2.77
CPNE1-203ENST00000397442 SEC23AQ15436 765 aa32.34■■■□□ 2.77
CPNE1-203ENST00000397442 ZNF287Q9HBT7 754 aa32.34■■■□□ 2.77
CPNE1-203ENST00000397442 H7C1D1 291 aa32.34■■■□□ 2.77
CPNE1-203ENST00000397442 KIF4BQ2VIQ3 1234 aa32.34■■■□□ 2.77
CPNE1-203ENST00000397442 SGMS1Q86VZ5 419 aa32.34■■■□□ 2.77
CPNE1-203ENST00000397442 ZNF274Q96GC6 653 aaPredicted RBP32.34■■■□□ 2.77
CPNE1-203ENST00000397442 VEZTQ9HBM0 779 aa32.34■■■□□ 2.77
CPNE1-203ENST00000397442 PDIA3P30101 505 aaKnown RBP32.33■■■□□ 2.77
CPNE1-203ENST00000397442 SART3Q15020 963 aaKnown RBP32.33■■■□□ 2.77
CPNE1-203ENST00000397442 CCDC83Q8IWF9 413 aa32.33■■■□□ 2.77
CPNE1-203ENST00000397442 FAM151AQ8WW52 585 aa32.33■■■□□ 2.77
CPNE1-203ENST00000397442 ZSCAN10Q96SZ4 725 aaPredicted RBP32.33■■■□□ 2.77
CPNE1-203ENST00000397442 UBAC1Q9BSL1 405 aa32.33■■■□□ 2.77
CPNE1-203ENST00000397442 PI4KBQ9UBF8 816 aa32.33■■■□□ 2.77
CPNE1-203ENST00000397442 TNKSO95271 1327 aa32.32■■■□□ 2.77
CPNE1-203ENST00000397442 TSPY2A6NKD2 308 aa32.32■■■□□ 2.76
CPNE1-203ENST00000397442 TFAP4Q01664 338 aa32.32■■■□□ 2.76
CPNE1-203ENST00000397442 STK3Q13188 491 aa32.32■■■□□ 2.76
CPNE1-203ENST00000397442 DNAJC18Q9H819 358 aa32.32■■■□□ 2.76
CPNE1-203ENST00000397442 KLF18A0A0U1RQI7 1052 aa32.31■■■□□ 2.76
CPNE1-203ENST00000397442 PFKFB2O60825 505 aa32.31■■■□□ 2.76
CPNE1-203ENST00000397442 SLURP2P0DP57 97 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms