RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ATRNL1Q5VV63 1379 aa22.37■■□□□ 1.17
TSPAN4-204ENST00000397404 KDM4AO75164 1064 aa22.37■■□□□ 1.17
TSPAN4-204ENST00000397404 BRF1Q92994 677 aa22.37■■□□□ 1.17
TSPAN4-204ENST00000397404 ZSWIM5Q9P217 1185 aa22.37■■□□□ 1.17
TSPAN4-204ENST00000397404 SLC4A3P48751 1232 aa22.36■■□□□ 1.17
TSPAN4-204ENST00000397404 FAM83AQ86UY5 434 aa22.36■■□□□ 1.17
TSPAN4-204ENST00000397404 ZBED3Q96IU2 234 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-204ENST00000397404 LLPHQ9BRT6 129 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-204ENST00000397404 MKNK2Q9HBH9 465 aa22.36■■□□□ 1.17
TSPAN4-204ENST00000397404 TCP11L1Q9NUJ3 509 aa22.36■■□□□ 1.17
TSPAN4-204ENST00000397404 SBF1O95248 1867 aa22.36■■□□□ 1.17
TSPAN4-204ENST00000397404 GOLGB1Q14789 3259 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-204ENST00000397404 SH2B2O14492 632 aaPredicted RBP22.35■■□□□ 1.17
TSPAN4-204ENST00000397404 ANTXR2P58335 489 aa22.35■■□□□ 1.17
TSPAN4-204ENST00000397404 TNFAIP1Q13829 316 aa22.35■■□□□ 1.17
TSPAN4-204ENST00000397404 SPDYE2Q495Y8 402 aa22.35■■□□□ 1.17
TSPAN4-204ENST00000397404 MYOZ2Q9NPC6 264 aa22.35■■□□□ 1.17
TSPAN4-204ENST00000397404 PI4KBQ9UBF8 816 aa22.35■■□□□ 1.17
TSPAN4-204ENST00000397404 SERPINB13Q9UIV8 391 aa22.35■■□□□ 1.17
TSPAN4-204ENST00000397404 TPCN1Q9ULQ1 816 aa22.35■■□□□ 1.17
TSPAN4-204ENST00000397404 IFIT3O14879 490 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 PFKFB2O60825 505 aa22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 SYNE3Q6ZMZ3 975 aa22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 FOXP4Q8IVH2 680 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 ZNF444Q8N0Y2 327 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 IGDCC4Q8TDY8 1250 aa22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 SLKQ9H2G2 1235 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 CHMP5Q9NZZ3 219 aa22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 ZBTB12Q9Y330 459 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 KIF3AQ9Y496 699 aa22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 H7C1D1 291 aa22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 RANBP6O60518 1105 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 TNNI2P48788 182 aa22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 PICALMQ13492 652 aa22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 ME3Q16798 604 aa22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 TMEM67Q5HYA8 995 aa22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 RRP12Q5JTH9 1297 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 GTF3C6Q969F1 213 aa22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 PRMT6Q96LA8 375 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-204ENST00000397404 TSPY2A6NKD2 308 aa22.33■■□□□ 1.16
TSPAN4-204ENST00000397404 NUCB2P80303 420 aa22.33■■□□□ 1.16
TSPAN4-204ENST00000397404 GABPAQ06546 454 aa22.33■■□□□ 1.16
TSPAN4-204ENST00000397404 WTAPQ15007 396 aa22.33■■□□□ 1.16
TSPAN4-204ENST00000397404 CYB5R4Q7L1T6 521 aa22.33■■□□□ 1.16
TSPAN4-204ENST00000397404 CCDC17Q96LX7 622 aa22.33■■□□□ 1.16
TSPAN4-204ENST00000397404 ZSCAN10Q96SZ4 725 aaPredicted RBP22.33■■□□□ 1.16
TSPAN4-204ENST00000397404 NID2Q14112 1375 aa22.32■■□□□ 1.16
TSPAN4-204ENST00000397404 CCDC69A6NI79 296 aa22.32■■□□□ 1.16
TSPAN4-204ENST00000397404 DDIT3P35638 169 aa22.32■■□□□ 1.16
TSPAN4-204ENST00000397404 PLCD1P51178 756 aa22.32■■□□□ 1.16
TSPAN4-204ENST00000397404 PRELPP51888 382 aa22.32■■□□□ 1.16
TSPAN4-204ENST00000397404 METTL16Q86W50 562 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-204ENST00000397404 DGKHQ86XP1 1220 aa22.32■■□□□ 1.16
TSPAN4-204ENST00000397404 FAM151AQ8WW52 585 aa22.32■■□□□ 1.16
TSPAN4-204ENST00000397404 TCEANC2Q96MN5 208 aa22.32■■□□□ 1.16
TSPAN4-204ENST00000397404 DDX4Q9NQI0 724 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-204ENST00000397404 ZNF70Q9UC06 446 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-204ENST00000397404 PLIN4Q96Q06 1357 aa22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 CYP2D7A0A087X1C5 515 aa22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 CCDC196A0A1B0GTZ2 297 aa22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 CALM1P0DP23 149 aa22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 CALM2P0DP24 149 aa22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 CALM3P0DP25 149 aa22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 CDK8P49336 464 aa22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 GMPSP49915 693 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 HMGN5P82970 282 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 CPLX2Q6PUV4 134 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 RGS22Q8NE09 1264 aa22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 TDRD3Q9H7E2 651 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 LY9Q9HBG7 655 aa22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 FAM198AQ9UFP1 575 aa22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 SAP30BPQ9UHR5 308 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 HERC5Q9UII4 1024 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 CNOT7Q9UIV1 285 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-204ENST00000397404 ADAMTSL1Q8N6G6 1762 aa22.3■■□□□ 1.16
TSPAN4-204ENST00000397404 WNT10BO00744 389 aa22.3■■□□□ 1.16
TSPAN4-204ENST00000397404 CYP2D6P10635 497 aa22.3■■□□□ 1.16
TSPAN4-204ENST00000397404 YBX3P16989 372 aaKnown RBP eCLIP22.3■■□□□ 1.16
TSPAN4-204ENST00000397404 PDCP20941 246 aa22.3■■□□□ 1.16
TSPAN4-204ENST00000397404 NOL8Q76FK4 1167 aaKnown RBP22.3■■□□□ 1.16
TSPAN4-204ENST00000397404 ANKS1AQ92625 1134 aa22.3■■□□□ 1.16
TSPAN4-204ENST00000397404 TRIM34Q9BYJ4 488 aa22.3■■□□□ 1.16
TSPAN4-204ENST00000397404 SMC3Q9UQE7 1217 aa22.3■■□□□ 1.16
TSPAN4-204ENST00000397404 SLC12A7Q9Y666 1083 aa22.3■■□□□ 1.16
TSPAN4-204ENST00000397404 GJA3Q9Y6H8 435 aa22.3■■□□□ 1.16
TSPAN4-204ENST00000397404 CDKL5O76039 1030 aa22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 TSPY3P0CV98 308 aa22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 TSPY8P0CW00 308 aa22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 PDIA3P30101 505 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 NFIAQ12857 509 aa22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 GPR162Q16538 588 aa22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 DPY19L2Q6NUT2 758 aa22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 NFXL1Q6ZNB6 911 aa22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 MICALL2Q8IY33 904 aa22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 LRRC2Q9BYS8 371 aa22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 RNF181Q9P0P0 153 aa22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 TNKSO95271 1327 aa22.29■■□□□ 1.16
TSPAN4-204ENST00000397404 KLF18A0A0U1RQI7 1052 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 APOBRQ0VD83 1088 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 IFIT1BQ5T764 474 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms