RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SIPA1L1O43166 1804 aa28.07■■■□□ 2.08
TSPAN4-203ENST00000397397 CTDSPL2Q05D32 466 aa28.06■■■□□ 2.08
TSPAN4-203ENST00000397397 NECTIN1Q15223 517 aa28.06■■■□□ 2.08
TSPAN4-203ENST00000397397 CREB3L3Q68CJ9 461 aa28.06■■■□□ 2.08
TSPAN4-203ENST00000397397 STK11IPQ8N1F8 1099 aa28.06■■■□□ 2.08
TSPAN4-203ENST00000397397 CDCA5Q96FF9 252 aa28.06■■■□□ 2.08
TSPAN4-203ENST00000397397 ANAPC4Q9UJX5 808 aa28.06■■■□□ 2.08
TSPAN4-203ENST00000397397 SUPT20HL1Q3ZLR7 823 aa28.05■■■□□ 2.08
TSPAN4-203ENST00000397397 FOXP4Q8IVH2 680 aaPredicted RBP28.05■■■□□ 2.08
TSPAN4-203ENST00000397397 CRACR2BQ8N4Y2 399 aaPredicted RBP28.05■■■□□ 2.08
TSPAN4-203ENST00000397397 DYNLL2Q96FJ2 89 aa28.05■■■□□ 2.08
TSPAN4-203ENST00000397397 TRIM34Q9BYJ4 488 aa28.05■■■□□ 2.08
TSPAN4-203ENST00000397397 EHD4Q9H223 541 aa28.05■■■□□ 2.08
TSPAN4-203ENST00000397397 SERPINB13Q9UIV8 391 aa28.05■■■□□ 2.08
TSPAN4-203ENST00000397397 SLC27A2O14975 620 aa28.04■■■□□ 2.08
TSPAN4-203ENST00000397397 SLC3A2P08195 630 aaKnown RBP28.04■■■□□ 2.08
TSPAN4-203ENST00000397397 CYP21A2P08686 494 aa28.04■■■□□ 2.08
TSPAN4-203ENST00000397397 MCCP23508 829 aa28.04■■■□□ 2.08
TSPAN4-203ENST00000397397 RNF20Q5VTR2 975 aa28.04■■■□□ 2.08
TSPAN4-203ENST00000397397 HOOK2Q96ED9 719 aa28.04■■■□□ 2.08
TSPAN4-203ENST00000397397 TRAF5O00463 557 aa28.03■■■□□ 2.08
TSPAN4-203ENST00000397397 HSPA4P34932 840 aa28.03■■■□□ 2.08
TSPAN4-203ENST00000397397 UPF2Q9HAU5 1272 aaKnown RBP28.03■■■□□ 2.08
TSPAN4-203ENST00000397397 ROBO3Q96MS0 1386 aa28.03■■■□□ 2.08
TSPAN4-203ENST00000397397 ITGBL1O95965 494 aaPredicted RBP28.02■■■□□ 2.08
TSPAN4-203ENST00000397397 SLURP2P0DP57 97 aa28.02■■■□□ 2.08
TSPAN4-203ENST00000397397 MIGA2Q7L4E1 593 aa28.02■■■□□ 2.08
TSPAN4-203ENST00000397397 NBPF3Q9H094 633 aa28.02■■■□□ 2.08
TSPAN4-203ENST00000397397 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.02■■■□□ 2.081e-7■■■■■ 39.7
TSPAN4-203ENST00000397397 CEP350Q5VT06 3117 aa28.02■■■□□ 2.08
TSPAN4-203ENST00000397397 PASKQ96RG2 1323 aa28.02■■■□□ 2.08
TSPAN4-203ENST00000397397 FAM196BA6NMK8 535 aa28.01■■■□□ 2.08
TSPAN4-203ENST00000397397 NF2P35240 595 aa28.01■■■□□ 2.08
TSPAN4-203ENST00000397397 GABPAQ06546 454 aa28.01■■■□□ 2.08
TSPAN4-203ENST00000397397 METTL16Q86W50 562 aaKnown RBP28.01■■■□□ 2.08
TSPAN4-203ENST00000397397 TBC1D10CQ8IV04 446 aa28.01■■■□□ 2.08
TSPAN4-203ENST00000397397 HERC5Q9UII4 1024 aaKnown RBP28.01■■■□□ 2.08
TSPAN4-203ENST00000397397 DCAF15Q66K64 600 aa28.01■■■□□ 2.07
TSPAN4-203ENST00000397397 C16orf86Q6ZW13 317 aa28.01■■■□□ 2.07
TSPAN4-203ENST00000397397 SLC44A5Q8NCS7 719 aa28.01■■■□□ 2.07
TSPAN4-203ENST00000397397 SWAP70Q9UH65 585 aa28.01■■■□□ 2.07
TSPAN4-203ENST00000397397 SSC5DA1L4H1 1573 aa28■■■□□ 2.07
TSPAN4-203ENST00000397397 TBC1D12O60347 775 aa28■■■□□ 2.07
TSPAN4-203ENST00000397397 CDK8P49336 464 aa28■■■□□ 2.07
TSPAN4-203ENST00000397397 FMR1Q06787 632 aaKnown RBP eCLIP28■■■□□ 2.07
TSPAN4-203ENST00000397397 PDE4BQ07343 736 aa28■■■□□ 2.07
TSPAN4-203ENST00000397397 AKNAD1Q5T1N1 836 aa28■■■□□ 2.07
TSPAN4-203ENST00000397397 DNAJC18Q9H819 358 aa28■■■□□ 2.07
TSPAN4-203ENST00000397397 TAF6LQ9Y6J9 622 aa28■■■□□ 2.07
TSPAN4-203ENST00000397397 ZKSCAN1P17029 563 aaPredicted RBP27.99■■■□□ 2.07
TSPAN4-203ENST00000397397 MAP3K10Q02779 954 aa27.99■■■□□ 2.07
TSPAN4-203ENST00000397397 MFSD6Q6ZSS7 791 aa27.99■■■□□ 2.07
TSPAN4-203ENST00000397397 DNAJC5GQ8N7S2 189 aa27.99■■■□□ 2.07
TSPAN4-203ENST00000397397 STAG1Q8WVM7 1258 aa27.99■■■□□ 2.07
TSPAN4-203ENST00000397397 RNF41Q9H4P4 317 aaPredicted RBP27.99■■■□□ 2.07
TSPAN4-203ENST00000397397 ZNF408Q9H9D4 720 aa27.99■■■□□ 2.07
TSPAN4-203ENST00000397397 MKNK2Q9HBH9 465 aa27.99■■■□□ 2.07
TSPAN4-203ENST00000397397 INCENPQ9NQS7 918 aa27.99■■■□□ 2.07
TSPAN4-203ENST00000397397 TAOK2Q9UL54 1235 aa27.99■■■□□ 2.07
TSPAN4-203ENST00000397397 TACC3Q9Y6A5 838 aa27.99■■■□□ 2.07
TSPAN4-203ENST00000397397 MYH8P13535 1937 aa27.98■■■□□ 2.07
TSPAN4-203ENST00000397397 RASEFQ8IZ41 740 aa27.98■■■□□ 2.07
TSPAN4-203ENST00000397397 KCNB2Q92953 911 aa27.98■■■□□ 2.07
TSPAN4-203ENST00000397397 ZNF287Q9HBT7 754 aa27.98■■■□□ 2.07
TSPAN4-203ENST00000397397 PRDM1O75626 825 aa27.97■■■□□ 2.07
TSPAN4-203ENST00000397397 SHMT1P34896 483 aa27.97■■■□□ 2.07
TSPAN4-203ENST00000397397 PRKG1Q13976 671 aa27.97■■■□□ 2.07
TSPAN4-203ENST00000397397 ZNF341Q9BYN7 854 aa27.97■■■□□ 2.07
TSPAN4-203ENST00000397397 C22orf23Q9BZE7 217 aa27.97■■■□□ 2.07
TSPAN4-203ENST00000397397 TOMM22Q9NS69 142 aa27.97■■■□□ 2.07
TSPAN4-203ENST00000397397 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.97■■■□□ 2.07
TSPAN4-203ENST00000397397 E7EWF7 191 aa27.96■■■□□ 2.07
TSPAN4-203ENST00000397397 FZD1Q9UP38 647 aa27.96■■■□□ 2.07
TSPAN4-203ENST00000397397 SNX14Q9Y5W7 946 aa27.96■■■□□ 2.07
TSPAN4-203ENST00000397397 FGRP09769 529 aa27.95■■■□□ 2.07
TSPAN4-203ENST00000397397 PCP11498 1178 aaKnown RBP27.95■■■□□ 2.07
TSPAN4-203ENST00000397397 RRP12Q5JTH9 1297 aaKnown RBP27.95■■■□□ 2.07
TSPAN4-203ENST00000397397 STOX1Q6ZVD7 989 aa27.95■■■□□ 2.07
TSPAN4-203ENST00000397397 NEDD4P46934 1319 aa27.95■■■□□ 2.06
TSPAN4-203ENST00000397397 TRPM7Q96QT4 1865 aa27.94■■■□□ 2.06
TSPAN4-203ENST00000397397 ORC4O43929 436 aa27.94■■■□□ 2.06
TSPAN4-203ENST00000397397 PPP1R12BO60237 982 aaPredicted RBP27.94■■■□□ 2.06
TSPAN4-203ENST00000397397 TTLL12Q14166 644 aaPredicted RBP27.94■■■□□ 2.06
TSPAN4-203ENST00000397397 TSGA10IPQ3SY00 556 aa27.94■■■□□ 2.06
TSPAN4-203ENST00000397397 TATDN1Q6P1N9 297 aa27.94■■■□□ 2.06
TSPAN4-203ENST00000397397 CELF2O95319 508 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-203ENST00000397397 TRDNQ13061 729 aa27.93■■■□□ 2.06
TSPAN4-203ENST00000397397 KRT32Q14532 448 aa27.93■■■□□ 2.06
TSPAN4-203ENST00000397397 CERKLQ49MI3 558 aaPredicted RBP27.93■■■□□ 2.06
TSPAN4-203ENST00000397397 ZNF444Q8N0Y2 327 aaPredicted RBP27.93■■■□□ 2.06
TSPAN4-203ENST00000397397 USP2O75604 605 aaPredicted RBP27.92■■■□□ 2.06
TSPAN4-203ENST00000397397 RASA1P20936 1047 aa27.92■■■□□ 2.06
TSPAN4-203ENST00000397397 KRT23Q9C075 422 aa27.92■■■□□ 2.06
TSPAN4-203ENST00000397397 CNNM2Q9H8M5 875 aa27.92■■■□□ 2.06
TSPAN4-203ENST00000397397 ANGEL1Q9UNK9 670 aaKnown RBP27.92■■■□□ 2.06
TSPAN4-203ENST00000397397 RALYLQ86SE5 291 aaKnown RBP27.92■■■□□ 2.06
TSPAN4-203ENST00000397397 NCOA7Q8NI08 942 aa27.92■■■□□ 2.06
TSPAN4-203ENST00000397397 PHF20L1A8MW92 1017 aa27.91■■■□□ 2.06
TSPAN4-203ENST00000397397 B4E1Z4 1266 aa27.91■■■□□ 2.06
TSPAN4-203ENST00000397397 RANBP6O60518 1105 aaKnown RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms