RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PALM2Q8IXS6 379 aa13.7□□□□□ -0.22
SMU1-201ENST00000397149 BMP15O95972 392 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 DNM1Q05193 864 aaKnown RBP13.69□□□□□ -0.22
SMU1-201ENST00000397149 ZNF804AQ7Z570 1209 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 CEP104O60308 925 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 SLC9C2Q5TAH2 1124 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 FAM180AQ6UWF9 173 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 NVLO15381 856 aaKnown RBP13.69□□□□□ -0.22
SMU1-201ENST00000397149 ATP6V1AP38606 617 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 SESTD1Q86VW0 696 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 HELBQ8NG08 1087 aaPredicted RBP13.69□□□□□ -0.22
SMU1-201ENST00000397149 ABTB1Q969K4 478 aaPredicted RBP13.69□□□□□ -0.22
SMU1-201ENST00000397149 TBC1D2Q9BYX2 928 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 FIS1Q9Y3D6 152 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 CD2APQ9Y5K6 639 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 SV2BQ7L1I2 683 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 FOXO3O43524 673 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 GCKP35557 465 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 KRT81Q14533 505 aa13.69□□□□□ -0.22
SMU1-201ENST00000397149 ZGPATQ8N5A5 531 aaKnown RBP13.69□□□□□ -0.22
SMU1-201ENST00000397149 UQCRFS1P1P0C7P4 283 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 EVCP57679 992 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 RDH13Q8NBN7 331 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 RSAD2Q8WXG1 361 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 CABS1Q96KC9 395 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 LRGUKQ96M69 825 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 PFDN1O60925 122 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 KCNH5Q8NCM2 988 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 KRT12Q99456 494 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 CAPN9O14815 690 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 IFNB1P01574 187 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 YARSP54577 528 aaKnown RBP13.68□□□□□ -0.22
SMU1-201ENST00000397149 NUDCD3Q8IVD9 361 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 MAGEB6Q8N7X4 407 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 ANGPTL3Q9Y5C1 460 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 NCAPH2Q6IBW4 605 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 METTL13Q8N6R0 699 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 GDAP1L1Q96MZ0 367 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 PLCB1Q9NQ66 1216 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 CCNT1O60563 726 aaKnown RBP13.68□□□□□ -0.22
SMU1-201ENST00000397149 TRAPPC10P48553 1259 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 NBPF8Q3BBV2 869 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 CCDC68Q9H2F9 335 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 SPC25Q9HBM1 224 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 SPTLC2O15270 562 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 XPAP23025 273 aaPredicted RBP13.68□□□□□ -0.22
SMU1-201ENST00000397149 CPXCR1Q8N123 301 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 ZSCAN32Q9NX65 697 aa13.68□□□□□ -0.22
SMU1-201ENST00000397149 OCM2P0CE71 109 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 OCMP0CE72 109 aaPredicted RBP13.67□□□□□ -0.22
SMU1-201ENST00000397149 PDE4DQ08499 809 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 ARHGAP44Q17R89 818 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 TMEM259Q4ZIN3 620 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 TBC1D9Q6ZT07 1266 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 ALKBH8Q96BT7 664 aaKnown RBP13.67□□□□□ -0.22
SMU1-201ENST00000397149 CNNM2Q9H8M5 875 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 AMOTL2Q9Y2J4 779 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 UVSSAQ2YD98 709 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 TMTC2Q8N394 836 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 PAGR1Q9BTK6 254 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 SCAPERQ9BY12 1400 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 TBC1D8BQ0IIM8 1120 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 WDR48Q8TAF3 677 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 ZNF653Q96CK0 615 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 NLRP3Q96P20 1036 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 DBF4Q9UBU7 674 aaPredicted RBP13.67□□□□□ -0.22
SMU1-201ENST00000397149 CFAP61Q8NHU2 1237 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 TFCP2L1Q9NZI6 479 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
SMU1-201ENST00000397149 USH1GQ495M9 461 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 ATP6V1E2Q96A05 226 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 MYCP01106 439 aaPredicted RBP13.66□□□□□ -0.22
SMU1-201ENST00000397149 TRIM50Q86XT4 487 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 SSH1Q8WYL5 1049 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 UBN1Q9NPG3 1134 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 SUCLA2Q9P2R7 463 aaPredicted RBP13.66□□□□□ -0.22
SMU1-201ENST00000397149 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMU1-201ENST00000397149 NAIPQ13075 1403 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 ARHGEF35A5YM69 484 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 ECE1P42892 770 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 SZRD1Q7Z422 152 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 APOBRQ0VD83 1088 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 CHRNA2Q15822 529 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 NME8Q8N427 588 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 UHMK1Q8TAS1 419 aaKnown RBP13.66□□□□□ -0.22
SMU1-201ENST00000397149 NUDT16Q96DE0 195 aaKnown RBP13.66□□□□□ -0.22
SMU1-201ENST00000397149 AKR1B15C9JRZ8 316 aaPredicted RBP13.66□□□□□ -0.22
SMU1-201ENST00000397149 EAPPQ56P03 285 aaPredicted RBP13.66□□□□□ -0.22
SMU1-201ENST00000397149 RSBN1LQ6PCB5 846 aaPredicted RBP13.66□□□□□ -0.22
SMU1-201ENST00000397149 PARP3Q9Y6F1 533 aa13.66□□□□□ -0.22
SMU1-201ENST00000397149 STX2P32856 288 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 NUCB1Q02818 461 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 GTPBP10A4D1E9 387 aaKnown RBP13.65□□□□□ -0.22
SMU1-201ENST00000397149 PI4KAP2A4QPH2 592 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 PI4KAP1Q8N8J0 262 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 CCDC138Q96M89 665 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 MMS19Q96T76 1030 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 TRIM55Q9BYV6 548 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 S100BP04271 92 aaPredicted RBP13.65□□□□□ -0.22
SMU1-201ENST00000397149 PARP1P09874 1014 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms