RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 CASC1Q6TDU7 716 aa20.56■□□□□ 0.88
HLA-A-204ENST00000396634 INCENPQ9NQS7 918 aa20.56■□□□□ 0.88
HLA-A-204ENST00000396634 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.56■□□□□ 0.88
HLA-A-204ENST00000396634 CTDSPL2Q05D32 466 aa20.56■□□□□ 0.88
HLA-A-204ENST00000396634 DDRGK1Q96HY6 314 aa20.56■□□□□ 0.88
HLA-A-204ENST00000396634 LAMA4Q16363 1823 aa20.56■□□□□ 0.88
HLA-A-204ENST00000396634 COL2A1P02458 1487 aaPredicted RBP20.56■□□□□ 0.88
HLA-A-204ENST00000396634 PAPPA2Q9BXP8 1791 aa20.55■□□□□ 0.88
HLA-A-204ENST00000396634 UBE2Q2LH0YL09 131 aa20.55■□□□□ 0.88
HLA-A-204ENST00000396634 MFAP1P55081 439 aaKnown RBP20.55■□□□□ 0.88
HLA-A-204ENST00000396634 RRP1BQ14684 758 aaKnown RBP20.55■□□□□ 0.88
HLA-A-204ENST00000396634 C12orf60Q5U649 245 aa20.55■□□□□ 0.88
HLA-A-204ENST00000396634 NACAP1Q9BZK3 213 aa20.55■□□□□ 0.88
HLA-A-204ENST00000396634 LSG1Q9H089 658 aaKnown RBP20.55■□□□□ 0.88
HLA-A-204ENST00000396634 ANGEL1Q9UNK9 670 aaKnown RBP20.55■□□□□ 0.88
HLA-A-204ENST00000396634 SUPT20HL1Q3ZLR7 823 aa20.54■□□□□ 0.88
HLA-A-204ENST00000396634 CRACR2BQ8N4Y2 399 aaPredicted RBP20.54■□□□□ 0.88
HLA-A-204ENST00000396634 DHX36Q9H2U1 1008 aaKnown RBP20.54■□□□□ 0.88
HLA-A-204ENST00000396634 GBA2Q9HCG7 927 aaPredicted RBP20.54■□□□□ 0.88
HLA-A-204ENST00000396634 PI4KBQ9UBF8 816 aa20.54■□□□□ 0.88
HLA-A-204ENST00000396634 TACC3Q9Y6A5 838 aa20.54■□□□□ 0.88
HLA-A-204ENST00000396634 TAF6LQ9Y6J9 622 aa20.54■□□□□ 0.88
HLA-A-204ENST00000396634 ATAD5Q96QE3 1844 aa20.54■□□□□ 0.88
HLA-A-204ENST00000396634 USP2O75604 605 aaPredicted RBP20.54■□□□□ 0.88
HLA-A-204ENST00000396634 HLA-DOAP06340 250 aa20.54■□□□□ 0.88
HLA-A-204ENST00000396634 NF2P35240 595 aa20.54■□□□□ 0.88
HLA-A-204ENST00000396634 NBPF3Q9H094 633 aa20.54■□□□□ 0.88
HLA-A-204ENST00000396634 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.54■□□□□ 0.88
HLA-A-204ENST00000396634 ARPP21Q9UBL0 812 aaPredicted RBP20.54■□□□□ 0.88
HLA-A-204ENST00000396634 PRDM1O75626 825 aa20.53■□□□□ 0.88
HLA-A-204ENST00000396634 SEC24BO95487 1268 aa20.53■□□□□ 0.88
HLA-A-204ENST00000396634 INPP5BP32019 993 aa20.53■□□□□ 0.88
HLA-A-204ENST00000396634 C8orf34Q49A92 452 aa20.53■□□□□ 0.88
HLA-A-204ENST00000396634 ZKSCAN4Q969J2 545 aaPredicted RBP20.53■□□□□ 0.88
HLA-A-204ENST00000396634 CLMNQ96JQ2 1002 aa20.53■□□□□ 0.88
HLA-A-204ENST00000396634 SERPINB13Q9UIV8 391 aa20.53■□□□□ 0.88
HLA-A-204ENST00000396634 PPARAQ07869 468 aa20.52■□□□□ 0.88
HLA-A-204ENST00000396634 GIMAP6Q6P9H5 292 aa20.52■□□□□ 0.88
HLA-A-204ENST00000396634 TTC6Q86TZ1 520 aa20.52■□□□□ 0.88
HLA-A-204ENST00000396634 WRNIP1Q96S55 665 aa20.52■□□□□ 0.88
HLA-A-204ENST00000396634 DSCC1Q9BVC3 393 aa20.52■□□□□ 0.88
HLA-A-204ENST00000396634 JAG1P78504 1218 aa20.52■□□□□ 0.87
HLA-A-204ENST00000396634 KIAA1211Q6ZU35 1233 aa20.52■□□□□ 0.87
HLA-A-204ENST00000396634 CCDC84Q86UT8 332 aaPredicted RBP20.52■□□□□ 0.87
HLA-A-204ENST00000396634 RBM8AQ9Y5S9 174 aaKnown RBP20.52■□□□□ 0.87
HLA-A-204ENST00000396634 GDF11O95390 407 aa20.51■□□□□ 0.87
HLA-A-204ENST00000396634 TBC1D10CQ8IV04 446 aa20.51■□□□□ 0.87
HLA-A-204ENST00000396634 NKX2-3Q8TAU0 364 aa20.51■□□□□ 0.87
HLA-A-204ENST00000396634 TRIM34Q9BYJ4 488 aa20.51■□□□□ 0.87
HLA-A-204ENST00000396634 PPP1R12BO60237 982 aaPredicted RBP20.5■□□□□ 0.87
HLA-A-204ENST00000396634 SHMT1P34896 483 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 C1QTNF8P60827 252 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 GABPAQ06546 454 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 ALX1Q15699 326 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 SBK1Q52WX2 424 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 AMOTL1Q8IY63 956 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 KLRG1Q96E93 195 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 ABT1Q9ULW3 272 aaKnown RBP20.5■□□□□ 0.87
HLA-A-204ENST00000396634 PHF20L1A8MW92 1017 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 DCAF15Q66K64 600 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 C2orf69Q8N8R5 385 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 MAP4K1Q92918 833 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 ZNF341Q9BYN7 854 aa20.5■□□□□ 0.87
HLA-A-204ENST00000396634 DOCK1Q14185 1865 aa20.49■□□□□ 0.87
HLA-A-204ENST00000396634 TMEM88BA6NKF7 163 aa20.49■□□□□ 0.87
HLA-A-204ENST00000396634 CDK8P49336 464 aa20.49■□□□□ 0.87
HLA-A-204ENST00000396634 APLP1P51693 650 aa20.49■□□□□ 0.87
HLA-A-204ENST00000396634 HUNKP57058 714 aa20.49■□□□□ 0.87
HLA-A-204ENST00000396634 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.49■□□□□ 0.87
HLA-A-204ENST00000396634 VGLL4Q14135 290 aa20.48■□□□□ 0.87
HLA-A-204ENST00000396634 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.48■□□□□ 0.872e-15■■□□□ 14.3
HLA-A-204ENST00000396634 EHD4Q9H223 541 aa20.48■□□□□ 0.87
HLA-A-204ENST00000396634 HERC5Q9UII4 1024 aaKnown RBP20.48■□□□□ 0.87
HLA-A-204ENST00000396634 CYP21A2P08686 494 aa20.47■□□□□ 0.87
HLA-A-204ENST00000396634 GRM1Q13255 1194 aa20.47■□□□□ 0.87
HLA-A-204ENST00000396634 C16orf86Q6ZW13 317 aa20.47■□□□□ 0.87
HLA-A-204ENST00000396634 ARMC9Q7Z3E5 817 aa20.47■□□□□ 0.87
HLA-A-204ENST00000396634 SAPCD2Q86UD0 394 aa20.47■□□□□ 0.87
HLA-A-204ENST00000396634 METTL16Q86W50 562 aaKnown RBP20.47■□□□□ 0.87
HLA-A-204ENST00000396634 CLEC10AQ8IUN9 316 aa20.47■□□□□ 0.87
HLA-A-204ENST00000396634 FOXP4Q8IVH2 680 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-204ENST00000396634 ROBO3Q96MS0 1386 aa20.47■□□□□ 0.87
HLA-A-204ENST00000396634 IREB2P48200 963 aaKnown RBP20.47■□□□□ 0.87
HLA-A-204ENST00000396634 MAP3K10Q02779 954 aa20.47■□□□□ 0.87
HLA-A-204ENST00000396634 MKRN3Q13064 507 aaKnown RBP20.47■□□□□ 0.87
HLA-A-204ENST00000396634 COL9A3Q14050 684 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-204ENST00000396634 ELP3Q9H9T3 547 aa20.47■□□□□ 0.87
HLA-A-204ENST00000396634 ZMYM6O95789 1325 aa20.47■□□□□ 0.87
HLA-A-204ENST00000396634 NEDD4P46934 1319 aa20.47■□□□□ 0.87
HLA-A-204ENST00000396634 ZNF213O14771 459 aa20.46■□□□□ 0.87
HLA-A-204ENST00000396634 TBC1D12O60347 775 aa20.46■□□□□ 0.87
HLA-A-204ENST00000396634 RRP12Q5JTH9 1297 aaKnown RBP20.46■□□□□ 0.87
HLA-A-204ENST00000396634 TOMM22Q9NS69 142 aa20.46■□□□□ 0.87
HLA-A-204ENST00000396634 U3KPZ7 1027 aaPredicted RBP20.46■□□□□ 0.87
HLA-A-204ENST00000396634 AKR1B1P15121 316 aa20.45■□□□□ 0.86
HLA-A-204ENST00000396634 IL27Q8NEV9 243 aa20.45■□□□□ 0.86
HLA-A-204ENST00000396634 HOOK2Q96ED9 719 aa20.45■□□□□ 0.86
HLA-A-204ENST00000396634 SNCAIPQ9Y6H5 919 aa20.45■□□□□ 0.86
HLA-A-204ENST00000396634 RASA1P20936 1047 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms