RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 NUP98P52948 1817 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 MYH7P12883 1935 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 UBN2Q6ZU65 1347 aa15.28■□□□□ 0.04
TRIM40-207ENST00000396581 CNTNAP4Q9C0A0 1308 aa15.28■□□□□ 0.04
TRIM40-207ENST00000396581 ECM29Q5VYK3 1845 aa15.28■□□□□ 0.04
TRIM40-207ENST00000396581 METAP2P50579 478 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRIM40-207ENST00000396581 LONRF3Q496Y0 759 aa15.28■□□□□ 0.04
TRIM40-207ENST00000396581 RSRC2Q7L4I2 434 aaKnown RBP15.28■□□□□ 0.04
TRIM40-207ENST00000396581 GPR161Q8N6U8 529 aaKnown RBP15.28■□□□□ 0.04
TRIM40-207ENST00000396581 PCDHA5Q9Y5H7 936 aa15.28■□□□□ 0.04
TRIM40-207ENST00000396581 COL5A3P25940 1745 aaPredicted RBP15.28■□□□□ 0.04
TRIM40-207ENST00000396581 ZAP70P43403 619 aa15.28■□□□□ 0.04
TRIM40-207ENST00000396581 GORABQ5T7V8 394 aa15.28■□□□□ 0.04
TRIM40-207ENST00000396581 RC3H1Q5TC82 1133 aaKnown RBP15.28■□□□□ 0.04
TRIM40-207ENST00000396581 APOA5Q6Q788 366 aa15.28■□□□□ 0.04
TRIM40-207ENST00000396581 SYNE4Q8N205 404 aa15.28■□□□□ 0.04
TRIM40-207ENST00000396581 ZNF512BQ96KM6 892 aaPredicted RBP15.28■□□□□ 0.04
TRIM40-207ENST00000396581 TRMT112Q9UI30 125 aaKnown RBP15.28■□□□□ 0.04
TRIM40-207ENST00000396581 KCNH3Q9ULD8 1083 aa15.28■□□□□ 0.04
TRIM40-207ENST00000396581 MRFAP1Q9Y605 127 aa15.28■□□□□ 0.04
TRIM40-207ENST00000396581 STK36Q9NRP7 1315 aa15.27■□□□□ 0.04
TRIM40-207ENST00000396581 NHSQ6T4R5 1651 aa15.27■□□□□ 0.04
TRIM40-207ENST00000396581 NID2Q14112 1375 aa15.27■□□□□ 0.04
TRIM40-207ENST00000396581 TULP2O00295 520 aa15.27■□□□□ 0.03
TRIM40-207ENST00000396581 CDC27P30260 824 aa15.27■□□□□ 0.03
TRIM40-207ENST00000396581 SARSP49591 514 aaKnown RBP15.27■□□□□ 0.03
TRIM40-207ENST00000396581 PDE4BQ07343 736 aa15.27■□□□□ 0.03
TRIM40-207ENST00000396581 CCDC57Q2TAC2 916 aa15.27■□□□□ 0.03
TRIM40-207ENST00000396581 CLEC4GQ6UXB4 293 aa15.27■□□□□ 0.03
TRIM40-207ENST00000396581 CYB5R4Q7L1T6 521 aa15.27■□□□□ 0.03
TRIM40-207ENST00000396581 SGMS1Q86VZ5 419 aa15.27■□□□□ 0.03
TRIM40-207ENST00000396581 RAB11FIP4Q86YS3 637 aa15.27■□□□□ 0.03
TRIM40-207ENST00000396581 TC2NQ8N9U0 490 aa15.27■□□□□ 0.03
TRIM40-207ENST00000396581 KIFC2Q96AC6 838 aa15.27■□□□□ 0.03
TRIM40-207ENST00000396581 TMEM87BQ96K49 555 aa15.27■□□□□ 0.03
TRIM40-207ENST00000396581 BAG1Q99933 345 aaPredicted RBP15.27■□□□□ 0.03
TRIM40-207ENST00000396581 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.27■□□□□ 0.03
TRIM40-207ENST00000396581 RGL2O15211 777 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 TBC1D8O95759 1140 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 ADD2P35612 726 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 CC2D1AQ6P1N0 951 aaPredicted RBP15.26■□□□□ 0.03
TRIM40-207ENST00000396581 CPLX2Q6PUV4 134 aaKnown RBP15.26■□□□□ 0.03
TRIM40-207ENST00000396581 CNNM3Q8NE01 707 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 TTLL11Q8NHH1 800 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 NKX2-3Q8TAU0 364 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 ENOX1Q8TC92 643 aaKnown RBP15.26■□□□□ 0.03
TRIM40-207ENST00000396581 FAM217BQ9NTX9 383 aaPredicted RBP15.26■□□□□ 0.03
TRIM40-207ENST00000396581 ANKRD36CQ5JPF3 1778 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 IRS4O14654 1257 aaPredicted RBP15.26■□□□□ 0.03
TRIM40-207ENST00000396581 TRDNQ13061 729 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 TBC1D10CQ8IV04 446 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 IGDCC4Q8TDY8 1250 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 AK7Q96M32 723 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 CLIC6Q96NY7 704 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 BTAF1O14981 1849 aa15.26■□□□□ 0.03
TRIM40-207ENST00000396581 SASH3O75995 380 aa15.25■□□□□ 0.03
TRIM40-207ENST00000396581 CASQ1P31415 396 aa15.25■□□□□ 0.03
TRIM40-207ENST00000396581 KCNQ4P56696 695 aa15.25■□□□□ 0.03
TRIM40-207ENST00000396581 RIC1Q4ADV7 1423 aa15.25■□□□□ 0.03
TRIM40-207ENST00000396581 PARP10Q53GL7 1025 aa15.25■□□□□ 0.03
TRIM40-207ENST00000396581 SPECC1LQ69YQ0 1117 aa15.25■□□□□ 0.03
TRIM40-207ENST00000396581 TRIML1Q8N9V2 468 aa15.25■□□□□ 0.03
TRIM40-207ENST00000396581 WDR24Q96S15 920 aa15.25■□□□□ 0.03
TRIM40-207ENST00000396581 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRIM40-207ENST00000396581 DENND2AQ9ULE3 1009 aa15.25■□□□□ 0.03
TRIM40-207ENST00000396581 AKAP11Q9UKA4 1901 aa15.25■□□□□ 0.03
TRIM40-207ENST00000396581 RANBP6O60518 1105 aaKnown RBP15.24■□□□□ 0.03
TRIM40-207ENST00000396581 GOLGA8FQ08AF8 430 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 GOLGA8DPQ0D2H9 430 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 IFIT5Q13325 482 aaKnown RBP15.24■□□□□ 0.03
TRIM40-207ENST00000396581 UBE3CQ15386 1083 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 TEX35Q5T0J7 233 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 STK11IPQ8N1F8 1099 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 KRI1Q8N9T8 703 aaKnown RBP15.24■□□□□ 0.03
TRIM40-207ENST00000396581 MLKLQ8NB16 471 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 RABGGTAQ92696 567 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 HOOK1Q9UJC3 728 aaKnown RBP15.24■□□□□ 0.03
TRIM40-207ENST00000396581 MAN1B1Q9UKM7 699 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 PDE8AO60658 829 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 CTSWP56202 376 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 MORC3Q14149 939 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 SUSD4Q5VX71 490 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 CCNL1Q9UK58 526 aaPredicted RBP15.24■□□□□ 0.03
TRIM40-207ENST00000396581 ZNF652Q9Y2D9 606 aa15.24■□□□□ 0.03
TRIM40-207ENST00000396581 ERICH4A6NGS2 130 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 RPS6KA4O75676 772 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 SEC31AO94979 1220 aaKnown RBP15.23■□□□□ 0.03
TRIM40-207ENST00000396581 PTPREP23469 700 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 IARSP41252 1262 aaKnown RBP15.23■□□□□ 0.03
TRIM40-207ENST00000396581 LIFRP42702 1097 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 MCAMP43121 646 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 PPP2R3AQ06190 1150 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 ALX1Q15699 326 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 ZNF579Q8NAF0 562 aaKnown RBP15.23■□□□□ 0.03
TRIM40-207ENST00000396581 SPATA20Q8TB22 786 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 PHKBQ93100 1093 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 LY9Q9HBG7 655 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 TMEM51Q9NW97 253 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 DACH1Q9UI36 760 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 SBF2Q86WG5 1849 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms